Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 RPS29P13-201ENST00000402041 169 ntBASIC1.61□□□□□ -2.15
NKX2-6A6NCS4 RNU2-63P-201ENST00000410792 194 ntBASIC1.61□□□□□ -2.15
NKX2-6A6NCS4 RNU6-1148P-201ENST00000410992 104 ntBASIC1.61□□□□□ -2.15
NKX2-6A6NCS4 RPL30P1-201ENST00000488676 339 ntBASIC1.61□□□□□ -2.15
NKX2-6A6NCS4 AC082651.2-201ENST00000496833 166 ntBASIC1.61□□□□□ -2.15
NKX2-6A6NCS4 SNORA4.4-201ENST00000515921 135 ntBASIC1.61□□□□□ -2.15
NKX2-6A6NCS4 SNORA31.16-201ENST00000516773 139 ntBASIC1.61□□□□□ -2.15
NKX2-6A6NCS4 RNU6-273P-201ENST00000516937 96 ntBASIC1.61□□□□□ -2.15
NKX2-6A6NCS4 RNU6-586P-201ENST00000517265 104 ntBASIC1.61□□□□□ -2.15
NKX2-6A6NCS4 AC087854.1-201ENST00000519706 414 ntBASIC1.61□□□□□ -2.15
NKX2-6A6NCS4 COPS8P3-201ENST00000526024 482 ntBASIC1.61□□□□□ -2.15
NKX2-6A6NCS4 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.61□□□□□ -2.15
NKX2-6A6NCS4 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.61□□□□□ -2.15
NKX2-6A6NCS4 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.61□□□□□ -2.15
NKX2-6A6NCS4 AC091135.1-201ENST00000585943 307 ntBASIC1.61□□□□□ -2.15
NKX2-6A6NCS4 AC078899.2-201ENST00000595282 212 ntBASIC1.61□□□□□ -2.15
NKX2-6A6NCS4 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
NKX2-6A6NCS4 MIR3662-201ENST00000637030 95 ntBASIC1.61□□□□□ -2.15
NKX2-6A6NCS4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
NKX2-6A6NCS4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 RNU6-661P-201ENST00000362409 107 ntBASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 RNU6-1285P-201ENST00000363480 105 ntBASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 RNU6-1317P-201ENST00000364582 104 ntBASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 SNORD32A-201ENST00000364805 84 ntBASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 RNU6-877P-201ENST00000383868 107 ntBASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 U8.10-201ENST00000384260 133 ntBASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 RNU1-148P-201ENST00000384472 162 ntBASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 RNU6-1222P-201ENST00000384615 107 ntBASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 SNORA12-201ENST00000391162 147 ntBASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 RNU4-62P-201ENST00000410125 130 ntBASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 Y_RNA.599-201ENST00000410489 109 ntBASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 Y_RNA.619-201ENST00000410951 90 ntBASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 AL590632.1-201ENST00000424289 371 ntBASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 USP9YP18-201ENST00000425912 695 ntBASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 MTND3P9-201ENST00000429526 346 ntBASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 SNAP23P1-201ENST00000433229 246 ntBASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 AC018868.1-201ENST00000491307 315 ntBASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 AC069439.1-201ENST00000494739 167 ntBASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 MIR449C-201ENST00000516047 92 ntBASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 AC109329.1-201ENST00000518744 317 ntBASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 HSPE1P4-201ENST00000550617 308 ntBASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 IMMP1LP2-201ENST00000552954 492 ntBASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 TRAV32-201ENST00000553993 340 ntBASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 MIR3122-201ENST00000577243 73 ntBASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 MIR3683-201ENST00000580847 82 ntBASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 BNIP3P16-201ENST00000589779 534 ntBASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 AC007014.2-201ENST00000615581 479 ntBASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.6□□□□□ -2.15
NKX2-6A6NCS4 RNU6-743P-201ENST00000364151 106 ntBASIC1.59□□□□□ -2.15
NKX2-6A6NCS4 RNU6-234P-201ENST00000365229 104 ntBASIC1.59□□□□□ -2.15
NKX2-6A6NCS4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
NKX2-6A6NCS4 Y_RNA.504-201ENST00000384481 104 ntBASIC1.59□□□□□ -2.15
NKX2-6A6NCS4 CBX3P9-201ENST00000402326 552 ntBASIC1.59□□□□□ -2.15
NKX2-6A6NCS4 MIR1294-201ENST00000408503 142 ntBASIC1.59□□□□□ -2.15
NKX2-6A6NCS4 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.59□□□□□ -2.15
NKX2-6A6NCS4 AL590135.1-201ENST00000422215 156 ntBASIC1.59□□□□□ -2.15
NKX2-6A6NCS4 AC019205.3-201ENST00000424573 156 ntBASIC1.59□□□□□ -2.15
NKX2-6A6NCS4 AC244670.1-201ENST00000436879 112 ntBASIC1.59□□□□□ -2.15
NKX2-6A6NCS4 MTND1P34-201ENST00000438556 671 ntBASIC1.59□□□□□ -2.15
NKX2-6A6NCS4 AC016700.2-201ENST00000446011 156 ntBASIC1.59□□□□□ -2.15
NKX2-6A6NCS4 NFU1P2-201ENST00000448700 469 ntBASIC1.59□□□□□ -2.15
NKX2-6A6NCS4 snoU13.14-201ENST00000459372 104 ntBASIC1.59□□□□□ -2.15
NKX2-6A6NCS4 RPL9P9-202ENST00000466501 579 ntBASIC1.59□□□□□ -2.15
NKX2-6A6NCS4 AC015911.1-201ENST00000495111 156 ntBASIC1.59□□□□□ -2.15
NKX2-6A6NCS4 RNU6-250P-201ENST00000516958 103 ntBASIC1.59□□□□□ -2.15
NKX2-6A6NCS4 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.59□□□□□ -2.15
NKX2-6A6NCS4 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.59□□□□□ -2.15
NKX2-6A6NCS4 AL109918.3-201ENST00000603072 338 ntBASIC1.59□□□□□ -2.15
NKX2-6A6NCS4 AP001836.1-201ENST00000604675 523 ntBASIC1.59□□□□□ -2.15
NKX2-6A6NCS4 AC084782.3-201ENST00000612282 578 ntBASIC1.59□□□□□ -2.15
NKX2-6A6NCS4 AC005296.1-201ENST00000616145 209 ntBASIC1.59□□□□□ -2.15
NKX2-6A6NCS4 U4.5-201ENST00000617137 123 ntBASIC1.59□□□□□ -2.15
NKX2-6A6NCS4 MTND4P23-201ENST00000447723 1363 ntBASIC1.59□□□□□ -2.16
NKX2-6A6NCS4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
NKX2-6A6NCS4 RNU4-15P-201ENST00000362613 141 ntBASIC1.58□□□□□ -2.16
NKX2-6A6NCS4 SNORA25B-201ENST00000365507 128 ntBASIC1.58□□□□□ -2.16
NKX2-6A6NCS4 SNORA32.2-201ENST00000384049 122 ntBASIC1.58□□□□□ -2.16
NKX2-6A6NCS4 MIR1287-201ENST00000408492 90 ntBASIC1.58□□□□□ -2.16
NKX2-6A6NCS4 RN7SKP158-201ENST00000410453 326 ntBASIC1.58□□□□□ -2.16
NKX2-6A6NCS4 Y_RNA.597-201ENST00000410463 100 ntBASIC1.58□□□□□ -2.16
NKX2-6A6NCS4 RNU6-325P-201ENST00000411132 105 ntBASIC1.58□□□□□ -2.16
NKX2-6A6NCS4 FCF1P9-201ENST00000412546 282 ntBASIC1.58□□□□□ -2.16
NKX2-6A6NCS4 VN1R36P-201ENST00000414936 291 ntBASIC1.58□□□□□ -2.16
NKX2-6A6NCS4 ARL5AP1-201ENST00000418991 388 ntBASIC1.58□□□□□ -2.16
NKX2-6A6NCS4 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.58□□□□□ -2.16
NKX2-6A6NCS4 AL359672.1-201ENST00000442302 409 ntBASIC1.58□□□□□ -2.16
NKX2-6A6NCS4 MTCO2P3-201ENST00000442543 421 ntBASIC1.58□□□□□ -2.16
NKX2-6A6NCS4 RNU7-187P-201ENST00000458985 68 ntBASIC1.58□□□□□ -2.16
NKX2-6A6NCS4 RNU7-66P-201ENST00000459469 62 ntBASIC1.58□□□□□ -2.16
NKX2-6A6NCS4 HMGB1P35-201ENST00000503360 598 ntBASIC1.58□□□□□ -2.16
NKX2-6A6NCS4 AC079140.5-201ENST00000507882 310 ntBASIC1.58□□□□□ -2.16
NKX2-6A6NCS4 RNU6-612P-201ENST00000516909 102 ntBASIC1.58□□□□□ -2.16
NKX2-6A6NCS4 RNU2-19P-201ENST00000517288 84 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms