Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 RNU6-9-201ENST00000384776 107 ntBASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 RNU6-33P-201ENST00000384793 107 ntBASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 SNORD12-201ENST00000391002 90 ntBASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 RNU6-757P-201ENST00000410334 100 ntBASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 RNU6-733P-201ENST00000410759 104 ntBASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 RNU6-1054P-201ENST00000411293 104 ntBASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 RPS3AP1-201ENST00000413190 320 ntBASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 RPL22P17-201ENST00000438729 315 ntBASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 RAP1BP2-201ENST00000478270 544 ntBASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 AC104982.1-201ENST00000478775 574 ntBASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 RPS23P5-201ENST00000495419 428 ntBASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 TRBVA-201ENST00000498804 316 ntBASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 AC016550.1-201ENST00000505348 785 ntBASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 AC116347.2-201ENST00000514912 523 ntBASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 SNORD79.1-201ENST00000516069 84 ntBASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 DEFB108E-201ENST00000524692 240 ntBASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 AC011604.1-201ENST00000545978 196 ntBASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 AC025423.5-201ENST00000550230 219 ntBASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 MIR5695-201ENST00000579717 85 ntBASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 BNIP3P16-201ENST00000589779 534 ntBASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 BNIP3P40-201ENST00000596017 556 ntBASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 AL929325.1-201ENST00000603096 117 ntBASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 AC016727.2-201ENST00000603988 621 ntBASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 AC064872.1-201ENST00000604823 1072 ntBASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 RNU6-6P-201ENST00000606623 107 ntBASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 AC097478.2-201ENST00000610572 514 ntBASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 AC009509.4-201ENST00000619202 509 ntBASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 BX322639.1-202ENST00000423987 2213 ntBASIC0.37□□□□□ -2.35
TRBV6-4A0A1B0GX49 RNU6-428P-201ENST00000362942 107 ntBASIC0.36□□□□□ -2.35
TRBV6-4A0A1B0GX49 U3.4-201ENST00000363352 213 ntBASIC0.36□□□□□ -2.35
TRBV6-4A0A1B0GX49 MIR200A-201ENST00000384875 90 ntBASIC0.36□□□□□ -2.35
TRBV6-4A0A1B0GX49 SNORA26.3-201ENST00000391119 136 ntBASIC0.36□□□□□ -2.35
TRBV6-4A0A1B0GX49 RPL21P1-201ENST00000399532 476 ntBASIC0.36□□□□□ -2.35
TRBV6-4A0A1B0GX49 MTCYBP36-201ENST00000404146 440 ntBASIC0.36□□□□□ -2.35
TRBV6-4A0A1B0GX49 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.36□□□□□ -2.35
TRBV6-4A0A1B0GX49 AC007283.2-201ENST00000424739 197 ntBASIC0.36□□□□□ -2.35
TRBV6-4A0A1B0GX49 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.36□□□□□ -2.35
TRBV6-4A0A1B0GX49 AC073614.1-201ENST00000438690 650 ntBASIC0.36□□□□□ -2.35
TRBV6-4A0A1B0GX49 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.36□□□□□ -2.35
TRBV6-4A0A1B0GX49 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.36□□□□□ -2.35
TRBV6-4A0A1B0GX49 Y_RNA.638-201ENST00000459374 113 ntBASIC0.36□□□□□ -2.35
TRBV6-4A0A1B0GX49 AC092991.1-201ENST00000477176 376 ntBASIC0.36□□□□□ -2.35
TRBV6-4A0A1B0GX49 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.36□□□□□ -2.35
TRBV6-4A0A1B0GX49 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.36□□□□□ -2.35
TRBV6-4A0A1B0GX49 AP003484.1-201ENST00000530974 250 ntBASIC0.36□□□□□ -2.35
TRBV6-4A0A1B0GX49 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.36□□□□□ -2.35
TRBV6-4A0A1B0GX49 ZNF519P3-201ENST00000557158 1032 ntBASIC0.36□□□□□ -2.35
TRBV6-4A0A1B0GX49 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.36□□□□□ -2.35
TRBV6-4A0A1B0GX49 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.36□□□□□ -2.35
TRBV6-4A0A1B0GX49 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.36□□□□□ -2.35
TRBV6-4A0A1B0GX49 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.36□□□□□ -2.35
TRBV6-4A0A1B0GX49 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.36□□□□□ -2.35
TRBV6-4A0A1B0GX49 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.36□□□□□ -2.35
TRBV6-4A0A1B0GX49 AP000484.1-201ENST00000620067 1252 ntBASIC0.36□□□□□ -2.35
TRBV6-4A0A1B0GX49 AL450472.1-202ENST00000637286 180 ntBASIC0.36□□□□□ -2.35
TRBV6-4A0A1B0GX49 AC023934.1-201ENST00000574529 2389 ntBASIC0.36□□□□□ -2.35
TRBV6-4A0A1B0GX49 AL442644.1-201ENST00000454390 3105 ntBASIC0.35□□□□□ -2.35
TRBV6-4A0A1B0GX49 RNA5SP347-201ENST00000362445 119 ntBASIC0.35□□□□□ -2.35
TRBV6-4A0A1B0GX49 RNU6-809P-201ENST00000384461 107 ntBASIC0.35□□□□□ -2.35
TRBV6-4A0A1B0GX49 RNA5SP109-201ENST00000391010 116 ntBASIC0.35□□□□□ -2.35
TRBV6-4A0A1B0GX49 AF228730.1-201ENST00000397972 663 ntBASIC0.35□□□□□ -2.35
TRBV6-4A0A1B0GX49 RNU2-39P-201ENST00000410604 198 ntBASIC0.35□□□□□ -2.35
TRBV6-4A0A1B0GX49 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.35□□□□□ -2.35
TRBV6-4A0A1B0GX49 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.35□□□□□ -2.35
TRBV6-4A0A1B0GX49 AC010154.1-201ENST00000425857 269 ntBASIC0.35□□□□□ -2.35
TRBV6-4A0A1B0GX49 CETN4P-201ENST00000432407 469 ntBASIC0.35□□□□□ -2.35
TRBV6-4A0A1B0GX49 USP9YP28-201ENST00000435142 589 ntBASIC0.35□□□□□ -2.35
TRBV6-4A0A1B0GX49 AC245047.7-201ENST00000440265 293 ntBASIC0.35□□□□□ -2.35
TRBV6-4A0A1B0GX49 AL157398.1-201ENST00000452981 186 ntBASIC0.35□□□□□ -2.35
TRBV6-4A0A1B0GX49 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.35□□□□□ -2.35
TRBV6-4A0A1B0GX49 AC117522.1-201ENST00000509821 380 ntBASIC0.35□□□□□ -2.35
TRBV6-4A0A1B0GX49 HSPE1P23-201ENST00000509838 286 ntBASIC0.35□□□□□ -2.35
TRBV6-4A0A1B0GX49 RNU6-685P-201ENST00000517088 95 ntBASIC0.35□□□□□ -2.35
TRBV6-4A0A1B0GX49 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.35□□□□□ -2.35
TRBV6-4A0A1B0GX49 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.35□□□□□ -2.35
TRBV6-4A0A1B0GX49 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.35□□□□□ -2.35
TRBV6-4A0A1B0GX49 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.35□□□□□ -2.35
TRBV6-4A0A1B0GX49 AC090517.1-201ENST00000569307 266 ntBASIC0.35□□□□□ -2.35
TRBV6-4A0A1B0GX49 MIR4714-201ENST00000580728 77 ntBASIC0.35□□□□□ -2.35
TRBV6-4A0A1B0GX49 MIR4452-201ENST00000583004 71 ntBASIC0.35□□□□□ -2.35
TRBV6-4A0A1B0GX49 RPL17P51-201ENST00000605218 238 ntBASIC0.35□□□□□ -2.35
TRBV6-4A0A1B0GX49 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.35□□□□□ -2.35
TRBV6-4A0A1B0GX49 MIR8070-201ENST00000616510 88 ntBASIC0.35□□□□□ -2.35
TRBV6-4A0A1B0GX49 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.35□□□□□ -2.35
TRBV6-4A0A1B0GX49 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.35□□□□□ -2.35
TRBV6-4A0A1B0GX49 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
TRBV6-4A0A1B0GX49 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
TRBV6-4A0A1B0GX49 RNU6-552P-201ENST00000362869 119 ntBASIC0.34□□□□□ -2.36
TRBV6-4A0A1B0GX49 SNORA72.2-201ENST00000365028 127 ntBASIC0.34□□□□□ -2.36
TRBV6-4A0A1B0GX49 SNORA25.9-201ENST00000365087 128 ntBASIC0.34□□□□□ -2.36
TRBV6-4A0A1B0GX49 Y_RNA.324-201ENST00000365165 102 ntBASIC0.34□□□□□ -2.36
TRBV6-4A0A1B0GX49 RNU6-969P-201ENST00000383900 105 ntBASIC0.34□□□□□ -2.36
TRBV6-4A0A1B0GX49 MIR558-201ENST00000384920 94 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms