Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 AC069294.1-201ENST00000608397 350 ntBASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 IGHVIII-44-202ENST00000636235 289 ntBASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.29□□□□□ -1.88
TRAV20A0A0B4J274 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
TRAV20A0A0B4J274 Y_RNA.54-201ENST00000362766 105 ntBASIC3.28□□□□□ -1.88
TRAV20A0A0B4J274 Y_RNA.569-201ENST00000384749 103 ntBASIC3.28□□□□□ -1.88
TRAV20A0A0B4J274 RNA5SP171-201ENST00000391071 115 ntBASIC3.28□□□□□ -1.88
TRAV20A0A0B4J274 SNORA3.3-201ENST00000408712 125 ntBASIC3.28□□□□□ -1.88
TRAV20A0A0B4J274 MIR1289-1-201ENST00000408836 144 ntBASIC3.28□□□□□ -1.88
TRAV20A0A0B4J274 RN7SKP156-201ENST00000410308 342 ntBASIC3.28□□□□□ -1.88
TRAV20A0A0B4J274 RNA5SP475-201ENST00000410568 110 ntBASIC3.28□□□□□ -1.88
TRAV20A0A0B4J274 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.28□□□□□ -1.88
TRAV20A0A0B4J274 TRIAP1P1-201ENST00000427062 225 ntBASIC3.28□□□□□ -1.88
TRAV20A0A0B4J274 RNA5SP179-201ENST00000517284 121 ntBASIC3.28□□□□□ -1.88
TRAV20A0A0B4J274 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.28□□□□□ -1.88
TRAV20A0A0B4J274 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.28□□□□□ -1.88
TRAV20A0A0B4J274 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.28□□□□□ -1.88
TRAV20A0A0B4J274 AC010620.2-201ENST00000600135 313 ntBASIC3.28□□□□□ -1.88
TRAV20A0A0B4J274 AC022441.3-201ENST00000605737 136 ntBASIC3.28□□□□□ -1.88
TRAV20A0A0B4J274 AC037487.3-201ENST00000606668 112 ntBASIC3.28□□□□□ -1.88
TRAV20A0A0B4J274 AC004467.1-201ENST00000615678 330 ntBASIC3.28□□□□□ -1.88
TRAV20A0A0B4J274 AC091932.3-201ENST00000624223 323 ntBASIC3.28□□□□□ -1.88
TRAV20A0A0B4J274 MIR3674-201ENST00000636576 68 ntBASIC3.28□□□□□ -1.88
TRAV20A0A0B4J274 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TRAV20A0A0B4J274 AC080128.1-201ENST00000474389 1917 ntBASIC3.28□□□□□ -1.88
TRAV20A0A0B4J274 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
TRAV20A0A0B4J274 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
TRAV20A0A0B4J274 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRAV20A0A0B4J274 AC135776.4-201ENST00000624300 1904 ntBASIC3.27□□□□□ -1.89
TRAV20A0A0B4J274 Y_RNA.20-201ENST00000362479 113 ntBASIC3.27□□□□□ -1.89
TRAV20A0A0B4J274 RNA5SP197-201ENST00000363357 119 ntBASIC3.27□□□□□ -1.89
TRAV20A0A0B4J274 RNU6-944P-201ENST00000364023 107 ntBASIC3.27□□□□□ -1.89
TRAV20A0A0B4J274 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TRAV20A0A0B4J274 AL603910.2-201ENST00000407268 136 ntBASIC3.27□□□□□ -1.89
TRAV20A0A0B4J274 MIR1294-201ENST00000408503 142 ntBASIC3.27□□□□□ -1.89
TRAV20A0A0B4J274 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.27□□□□□ -1.89
TRAV20A0A0B4J274 GOT2P5-201ENST00000433995 546 ntBASIC3.27□□□□□ -1.89
TRAV20A0A0B4J274 AL500522.2-201ENST00000448562 343 ntBASIC3.27□□□□□ -1.89
TRAV20A0A0B4J274 AC005042.3-201ENST00000453230 174 ntBASIC3.27□□□□□ -1.89
TRAV20A0A0B4J274 RPL23AP3-201ENST00000453844 468 ntBASIC3.27□□□□□ -1.89
TRAV20A0A0B4J274 AC083906.5-201ENST00000503722 328 ntBASIC3.27□□□□□ -1.89
TRAV20A0A0B4J274 RNU5F-4P-201ENST00000516581 114 ntBASIC3.27□□□□□ -1.89
TRAV20A0A0B4J274 RNU2-31P-201ENST00000516954 155 ntBASIC3.27□□□□□ -1.89
TRAV20A0A0B4J274 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.27□□□□□ -1.89
TRAV20A0A0B4J274 AC023043.3-201ENST00000593113 385 ntBASIC3.27□□□□□ -1.89
TRAV20A0A0B4J274 AC008749.1-201ENST00000597650 306 ntBASIC3.27□□□□□ -1.89
TRAV20A0A0B4J274 AC091167.4-201ENST00000605079 184 ntBASIC3.27□□□□□ -1.89
TRAV20A0A0B4J274 AC141273.2-201ENST00000618989 130 ntBASIC3.27□□□□□ -1.89
TRAV20A0A0B4J274 AC039056.2-201ENST00000622261 511 ntBASIC3.27□□□□□ -1.89
TRAV20A0A0B4J274 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRAV20A0A0B4J274 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TRAV20A0A0B4J274 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRAV20A0A0B4J274 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
TRAV20A0A0B4J274 MAPK10-373ENST00000641983 6772 ntBASIC3.27□□□□□ -1.89
TRAV20A0A0B4J274 CEP170P1-201ENST00000502249 4587 ntBASIC3.27□□□□□ -1.89
TRAV20A0A0B4J274 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRAV20A0A0B4J274 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.26□□□□□ -1.89
TRAV20A0A0B4J274 RNU6-1266P-201ENST00000362794 105 ntBASIC3.26□□□□□ -1.89
TRAV20A0A0B4J274 RNU6-326P-201ENST00000365480 107 ntBASIC3.26□□□□□ -1.89
TRAV20A0A0B4J274 RNU6-1264P-201ENST00000383891 107 ntBASIC3.26□□□□□ -1.89
TRAV20A0A0B4J274 MIR30B-201ENST00000384850 88 ntBASIC3.26□□□□□ -1.89
TRAV20A0A0B4J274 RNA5SP504-201ENST00000410676 117 ntBASIC3.26□□□□□ -1.89
TRAV20A0A0B4J274 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.26□□□□□ -1.89
TRAV20A0A0B4J274 AC002075.2-201ENST00000425207 252 ntBASIC3.26□□□□□ -1.89
TRAV20A0A0B4J274 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.26□□□□□ -1.89
TRAV20A0A0B4J274 TBCAP1-201ENST00000436520 327 ntBASIC3.26□□□□□ -1.89
TRAV20A0A0B4J274 RBMY2UP-201ENST00000453474 324 ntBASIC3.26□□□□□ -1.89
TRAV20A0A0B4J274 RN7SL601P-201ENST00000471221 293 ntBASIC3.26□□□□□ -1.89
TRAV20A0A0B4J274 MIR449C-201ENST00000516047 92 ntBASIC3.26□□□□□ -1.89
TRAV20A0A0B4J274 RNU6-1098P-201ENST00000516772 96 ntBASIC3.26□□□□□ -1.89
TRAV20A0A0B4J274 AP002001.1-203ENST00000534002 267 ntBASIC3.26□□□□□ -1.89
TRAV20A0A0B4J274 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.26□□□□□ -1.89
TRAV20A0A0B4J274 MIR3944-201ENST00000581277 108 ntBASIC3.26□□□□□ -1.89
TRAV20A0A0B4J274 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.26□□□□□ -1.89
TRAV20A0A0B4J274 AL590240.4-201ENST00000616908 390 ntBASIC3.26□□□□□ -1.89
TRAV20A0A0B4J274 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.26□□□□□ -1.89
TRAV20A0A0B4J274 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRAV20A0A0B4J274 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRAV20A0A0B4J274 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
TRAV20A0A0B4J274 Y_RNA.101-201ENST00000363154 102 ntBASIC3.25□□□□□ -1.89
TRAV20A0A0B4J274 Y_RNA.515-201ENST00000384535 112 ntBASIC3.25□□□□□ -1.89
TRAV20A0A0B4J274 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TRAV20A0A0B4J274 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.25□□□□□ -1.89
TRAV20A0A0B4J274 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TRAV20A0A0B4J274 AL139247.1-201ENST00000422768 325 ntBASIC3.25□□□□□ -1.89
TRAV20A0A0B4J274 POLR2KP2-201ENST00000438155 177 ntBASIC3.25□□□□□ -1.89
TRAV20A0A0B4J274 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.25□□□□□ -1.89
TRAV20A0A0B4J274 AC090515.1-201ENST00000465295 476 ntBASIC3.25□□□□□ -1.89
TRAV20A0A0B4J274 AC023141.11-201ENST00000508864 202 ntBASIC3.25□□□□□ -1.89
TRAV20A0A0B4J274 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.25□□□□□ -1.89
TRAV20A0A0B4J274 RNA5SP164-201ENST00000516533 110 ntBASIC3.25□□□□□ -1.89
TRAV20A0A0B4J274 RNU6-111P-201ENST00000517179 105 ntBASIC3.25□□□□□ -1.89
TRAV20A0A0B4J274 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.25□□□□□ -1.89
TRAV20A0A0B4J274 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms