Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 AC007547.1-201ENST00000462177 490 ntBASIC0.52□□□□□ -2.33
TMEM56-RWDD3S4R434 AC048334.1-201ENST00000477975 159 ntBASIC0.52□□□□□ -2.33
TMEM56-RWDD3S4R434 RPS23P5-201ENST00000495419 428 ntBASIC0.52□□□□□ -2.33
TMEM56-RWDD3S4R434 HMGN1P12-201ENST00000499125 195 ntBASIC0.52□□□□□ -2.33
TMEM56-RWDD3S4R434 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.52□□□□□ -2.33
TMEM56-RWDD3S4R434 AC116347.2-201ENST00000514912 523 ntBASIC0.52□□□□□ -2.33
TMEM56-RWDD3S4R434 AC025423.5-201ENST00000550230 219 ntBASIC0.52□□□□□ -2.33
TMEM56-RWDD3S4R434 EIF4A1P12-201ENST00000551910 141 ntBASIC0.52□□□□□ -2.33
TMEM56-RWDD3S4R434 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.52□□□□□ -2.33
TMEM56-RWDD3S4R434 MIR4298-201ENST00000584380 73 ntBASIC0.52□□□□□ -2.33
TMEM56-RWDD3S4R434 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.52□□□□□ -2.33
TMEM56-RWDD3S4R434 AC022432.1-201ENST00000595739 310 ntBASIC0.52□□□□□ -2.33
TMEM56-RWDD3S4R434 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.52□□□□□ -2.33
TMEM56-RWDD3S4R434 AC078795.3-201ENST00000602913 472 ntBASIC0.52□□□□□ -2.33
TMEM56-RWDD3S4R434 MIR6835-201ENST00000621552 64 ntBASIC0.52□□□□□ -2.33
TMEM56-RWDD3S4R434 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.52□□□□□ -2.33
TMEM56-RWDD3S4R434 MIR338-201ENST00000636369 67 ntBASIC0.52□□□□□ -2.33
TMEM56-RWDD3S4R434 AC106858.1-201ENST00000637497 429 ntBASIC0.52□□□□□ -2.33
TMEM56-RWDD3S4R434 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.52□□□□□ -2.33
TMEM56-RWDD3S4R434 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
TMEM56-RWDD3S4R434 RNU6-418P-201ENST00000384035 107 ntBASIC0.51□□□□□ -2.33
TMEM56-RWDD3S4R434 MIR605-201ENST00000385078 83 ntBASIC0.51□□□□□ -2.33
TMEM56-RWDD3S4R434 SNORD12-201ENST00000391002 90 ntBASIC0.51□□□□□ -2.33
TMEM56-RWDD3S4R434 RPS3AP1-201ENST00000413190 320 ntBASIC0.51□□□□□ -2.33
TMEM56-RWDD3S4R434 RPS26P5-201ENST00000418544 335 ntBASIC0.51□□□□□ -2.33
TMEM56-RWDD3S4R434 AC078809.1-201ENST00000427601 140 ntBASIC0.51□□□□□ -2.33
TMEM56-RWDD3S4R434 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.51□□□□□ -2.33
TMEM56-RWDD3S4R434 AP003168.1-201ENST00000530091 307 ntBASIC0.51□□□□□ -2.33
TMEM56-RWDD3S4R434 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.51□□□□□ -2.33
TMEM56-RWDD3S4R434 HSPE1P4-201ENST00000550617 308 ntBASIC0.51□□□□□ -2.33
TMEM56-RWDD3S4R434 AL121579.1-201ENST00000555129 305 ntBASIC0.51□□□□□ -2.33
TMEM56-RWDD3S4R434 RPL17P51-201ENST00000605218 238 ntBASIC0.51□□□□□ -2.33
TMEM56-RWDD3S4R434 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
TMEM56-RWDD3S4R434 AL359740.1-201ENST00000624340 592 ntBASIC0.51□□□□□ -2.33
TMEM56-RWDD3S4R434 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.51□□□□□ -2.33
TMEM56-RWDD3S4R434 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
TMEM56-RWDD3S4R434 MIR337-201ENST00000362281 93 ntBASIC0.5□□□□□ -2.33
TMEM56-RWDD3S4R434 U3.4-201ENST00000363352 213 ntBASIC0.5□□□□□ -2.33
TMEM56-RWDD3S4R434 SNORA72.2-201ENST00000365028 127 ntBASIC0.5□□□□□ -2.33
TMEM56-RWDD3S4R434 Y_RNA.338-201ENST00000365320 114 ntBASIC0.5□□□□□ -2.33
TMEM56-RWDD3S4R434 MIR520E-201ENST00000384867 87 ntBASIC0.5□□□□□ -2.33
TMEM56-RWDD3S4R434 MIR200A-201ENST00000384875 90 ntBASIC0.5□□□□□ -2.33
TMEM56-RWDD3S4R434 RNU6-757P-201ENST00000410334 100 ntBASIC0.5□□□□□ -2.33
TMEM56-RWDD3S4R434 RNU2-39P-201ENST00000410604 198 ntBASIC0.5□□□□□ -2.33
TMEM56-RWDD3S4R434 RNU6-321P-201ENST00000410912 106 ntBASIC0.5□□□□□ -2.33
TMEM56-RWDD3S4R434 HMGN1P14-201ENST00000412459 517 ntBASIC0.5□□□□□ -2.33
TMEM56-RWDD3S4R434 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.5□□□□□ -2.33
TMEM56-RWDD3S4R434 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.5□□□□□ -2.33
TMEM56-RWDD3S4R434 AC011233.1-201ENST00000422812 283 ntBASIC0.5□□□□□ -2.33
TMEM56-RWDD3S4R434 AC137499.1-201ENST00000427602 88 ntBASIC0.5□□□□□ -2.33
TMEM56-RWDD3S4R434 C1DP4-201ENST00000455429 424 ntBASIC0.5□□□□□ -2.33
TMEM56-RWDD3S4R434 AC091435.1-201ENST00000505442 584 ntBASIC0.5□□□□□ -2.33
TMEM56-RWDD3S4R434 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.5□□□□□ -2.33
TMEM56-RWDD3S4R434 AC067942.3-201ENST00000512025 362 ntBASIC0.5□□□□□ -2.33
TMEM56-RWDD3S4R434 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.5□□□□□ -2.33
TMEM56-RWDD3S4R434 AL590705.4-201ENST00000532209 134 ntBASIC0.5□□□□□ -2.33
TMEM56-RWDD3S4R434 BNIP3P40-201ENST00000596017 556 ntBASIC0.5□□□□□ -2.33
TMEM56-RWDD3S4R434 AC105148.1-201ENST00000604961 409 ntBASIC0.5□□□□□ -2.33
TMEM56-RWDD3S4R434 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.5□□□□□ -2.33
TMEM56-RWDD3S4R434 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
TMEM56-RWDD3S4R434 AC021506.2-201ENST00000612354 169 ntBASIC0.5□□□□□ -2.33
TMEM56-RWDD3S4R434 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.5□□□□□ -2.33
TMEM56-RWDD3S4R434 uc_338.17-201ENST00000619633 179 ntBASIC0.5□□□□□ -2.33
TMEM56-RWDD3S4R434 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 RNA5SP361-201ENST00000362686 118 ntBASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 RNU6-37P-201ENST00000362692 107 ntBASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 Y_RNA.97-201ENST00000363094 102 ntBASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 SNORA33-201ENST00000363664 130 ntBASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 RNU6-11P-201ENST00000364234 107 ntBASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 RNU6-25P-201ENST00000383873 107 ntBASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 RNU6-1-201ENST00000383898 107 ntBASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 RNU6-48P-201ENST00000384161 107 ntBASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 RNU6-36P-201ENST00000384172 107 ntBASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 RNU6-4P-201ENST00000384205 107 ntBASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 RNU6-5P-201ENST00000384238 107 ntBASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 RNU6-3P-201ENST00000384314 107 ntBASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 RNU6-16P-201ENST00000384385 107 ntBASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 RNU6-809P-201ENST00000384461 107 ntBASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 RNU6-15P-201ENST00000384534 107 ntBASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 RNU6-2-201ENST00000384627 107 ntBASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 RNU6-29P-201ENST00000384637 107 ntBASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 RNU6-9-201ENST00000384776 107 ntBASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 RNU6-33P-201ENST00000384793 107 ntBASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 MIR92A1-201ENST00000385233 78 ntBASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 RNU6-1054P-201ENST00000411293 104 ntBASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 RPL23AP95-201ENST00000426806 265 ntBASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 USP9YP28-201ENST00000435142 589 ntBASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 AC104982.1-201ENST00000478775 574 ntBASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 AC117522.1-201ENST00000509821 380 ntBASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 RNU6-1053P-201ENST00000515930 101 ntBASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 RNA5SP121-201ENST00000516537 101 ntBASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.49□□□□□ -2.33
TMEM56-RWDD3S4R434 ZNF519P3-201ENST00000557158 1032 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms