Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 AC074133.1-201ENST00000515696 183 ntBASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 MRPS18CP4-201ENST00000535821 231 ntBASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 HSPE1P4-201ENST00000550617 308 ntBASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 UBL5P4-201ENST00000562584 236 ntBASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 MIR548AI-201ENST00000579940 88 ntBASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 AC020895.1-201ENST00000595362 272 ntBASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 AC005176.2-201ENST00000596933 147 ntBASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 AL162713.1-201ENST00000604480 262 ntBASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 AC108706.1-201ENST00000611053 297 ntBASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 MIR3529-201ENST00000637713 78 ntBASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.55□□□□□ -1.84
HCFC2Q9Y5Z7 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HCFC2Q9Y5Z7 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.54□□□□□ -1.84
HCFC2Q9Y5Z7 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.54□□□□□ -1.84
HCFC2Q9Y5Z7 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.54□□□□□ -1.84
HCFC2Q9Y5Z7 RNU6-858P-201ENST00000362436 107 ntBASIC3.54□□□□□ -1.84
HCFC2Q9Y5Z7 SNORA31-201ENST00000362607 130 ntBASIC3.54□□□□□ -1.84
HCFC2Q9Y5Z7 Y_RNA.217-201ENST00000364214 105 ntBASIC3.54□□□□□ -1.84
HCFC2Q9Y5Z7 RNU1-140P-201ENST00000365040 165 ntBASIC3.54□□□□□ -1.84
HCFC2Q9Y5Z7 RNA5SP167-201ENST00000365461 116 ntBASIC3.54□□□□□ -1.84
HCFC2Q9Y5Z7 RNU6-81P-201ENST00000365608 104 ntBASIC3.54□□□□□ -1.84
HCFC2Q9Y5Z7 Y_RNA.383-201ENST00000383855 97 ntBASIC3.54□□□□□ -1.84
HCFC2Q9Y5Z7 RNU6-1035P-201ENST00000384477 107 ntBASIC3.54□□□□□ -1.84
HCFC2Q9Y5Z7 FTH1P15-201ENST00000406984 280 ntBASIC3.54□□□□□ -1.84
HCFC2Q9Y5Z7 RNA5SP390-201ENST00000410191 113 ntBASIC3.54□□□□□ -1.84
HCFC2Q9Y5Z7 VDAC1P3-201ENST00000434069 851 ntBASIC3.54□□□□□ -1.84
HCFC2Q9Y5Z7 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.54□□□□□ -1.84
HCFC2Q9Y5Z7 AC005042.3-201ENST00000453230 174 ntBASIC3.54□□□□□ -1.84
HCFC2Q9Y5Z7 Y_RNA.641-201ENST00000459414 105 ntBASIC3.54□□□□□ -1.84
HCFC2Q9Y5Z7 AP000873.1-201ENST00000463987 400 ntBASIC3.54□□□□□ -1.84
HCFC2Q9Y5Z7 SNORA70.14-201ENST00000516205 110 ntBASIC3.54□□□□□ -1.84
HCFC2Q9Y5Z7 AC022559.1-201ENST00000520905 205 ntBASIC3.54□□□□□ -1.84
HCFC2Q9Y5Z7 AC009163.5-201ENST00000575421 637 ntBASIC3.54□□□□□ -1.84
HCFC2Q9Y5Z7 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.54□□□□□ -1.84
HCFC2Q9Y5Z7 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.54□□□□□ -1.84
HCFC2Q9Y5Z7 MIR6715A-201ENST00000615929 79 ntBASIC3.54□□□□□ -1.84
HCFC2Q9Y5Z7 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.54□□□□□ -1.84
HCFC2Q9Y5Z7 MIR4727-201ENST00000622232 55 ntBASIC3.54□□□□□ -1.84
HCFC2Q9Y5Z7 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.54□□□□□ -1.84
HCFC2Q9Y5Z7 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.54□□□□□ -1.84
HCFC2Q9Y5Z7 MAPK10-373ENST00000641983 6772 ntBASIC3.54□□□□□ -1.84
HCFC2Q9Y5Z7 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.54□□□□□ -1.84
HCFC2Q9Y5Z7 FAM35BP-202ENST00000497389 3337 ntBASIC3.54□□□□□ -1.84
HCFC2Q9Y5Z7 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
HCFC2Q9Y5Z7 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
HCFC2Q9Y5Z7 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
HCFC2Q9Y5Z7 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.53□□□□□ -1.84
HCFC2Q9Y5Z7 Y_RNA.331-201ENST00000365267 102 ntBASIC3.53□□□□□ -1.84
HCFC2Q9Y5Z7 Y_RNA.441-201ENST00000384123 112 ntBASIC3.53□□□□□ -1.84
HCFC2Q9Y5Z7 MIR544A-201ENST00000384855 91 ntBASIC3.53□□□□□ -1.84
HCFC2Q9Y5Z7 Y_RNA.595-201ENST00000410403 105 ntBASIC3.53□□□□□ -1.84
HCFC2Q9Y5Z7 AC112220.1-201ENST00000434628 355 ntBASIC3.53□□□□□ -1.84
HCFC2Q9Y5Z7 UQCRBP2-201ENST00000447827 297 ntBASIC3.53□□□□□ -1.84
HCFC2Q9Y5Z7 AC007215.1-201ENST00000464893 276 ntBASIC3.53□□□□□ -1.84
HCFC2Q9Y5Z7 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.53□□□□□ -1.84
HCFC2Q9Y5Z7 RPS26P15-201ENST00000488067 348 ntBASIC3.53□□□□□ -1.84
HCFC2Q9Y5Z7 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.53□□□□□ -1.84
HCFC2Q9Y5Z7 MIR5692C2-201ENST00000577959 77 ntBASIC3.53□□□□□ -1.84
HCFC2Q9Y5Z7 MIR3144-201ENST00000579460 79 ntBASIC3.53□□□□□ -1.84
HCFC2Q9Y5Z7 AL356575.1-201ENST00000603008 283 ntBASIC3.53□□□□□ -1.84
HCFC2Q9Y5Z7 AC010999.1-201ENST00000611856 324 ntBASIC3.53□□□□□ -1.84
HCFC2Q9Y5Z7 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.53□□□□□ -1.84
HCFC2Q9Y5Z7 AC006001.4-201ENST00000622243 395 ntBASIC3.53□□□□□ -1.84
HCFC2Q9Y5Z7 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
HCFC2Q9Y5Z7 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HCFC2Q9Y5Z7 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HCFC2Q9Y5Z7 AL359854.1-201ENST00000614203 1594 ntBASIC3.53□□□□□ -1.84
HCFC2Q9Y5Z7 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
HCFC2Q9Y5Z7 ADAM3A-203ENST00000461344 2157 ntBASIC3.53□□□□□ -1.84
HCFC2Q9Y5Z7 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.53□□□□□ -1.85
HCFC2Q9Y5Z7 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
HCFC2Q9Y5Z7 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HCFC2Q9Y5Z7 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HCFC2Q9Y5Z7 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
HCFC2Q9Y5Z7 RNU6-1285P-201ENST00000363480 105 ntBASIC3.52□□□□□ -1.85
HCFC2Q9Y5Z7 RNU6-884P-201ENST00000363889 107 ntBASIC3.52□□□□□ -1.85
HCFC2Q9Y5Z7 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.52□□□□□ -1.85
HCFC2Q9Y5Z7 SNORD6-201ENST00000365444 73 ntBASIC3.52□□□□□ -1.85
HCFC2Q9Y5Z7 AC244670.1-201ENST00000436879 112 ntBASIC3.52□□□□□ -1.85
HCFC2Q9Y5Z7 HMGN2P10-201ENST00000448085 265 ntBASIC3.52□□□□□ -1.85
HCFC2Q9Y5Z7 RPS27AP10-201ENST00000496103 208 ntBASIC3.52□□□□□ -1.85
HCFC2Q9Y5Z7 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.52□□□□□ -1.85
HCFC2Q9Y5Z7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.52□□□□□ -1.85
HCFC2Q9Y5Z7 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.52□□□□□ -1.85
HCFC2Q9Y5Z7 AP001485.1-201ENST00000604799 199 ntBASIC3.52□□□□□ -1.85
HCFC2Q9Y5Z7 AC004832.4-201ENST00000608952 331 ntBASIC3.52□□□□□ -1.85
HCFC2Q9Y5Z7 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HCFC2Q9Y5Z7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HCFC2Q9Y5Z7 AC110491.1-201ENST00000562191 2010 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms