Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.5□□□□□ -1.85
PCDHB4Q9Y5E5 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHB4Q9Y5E5 Y_RNA.29-201ENST00000362570 113 ntBASIC3.49□□□□□ -1.85
PCDHB4Q9Y5E5 RNU6-1285P-201ENST00000363480 105 ntBASIC3.49□□□□□ -1.85
PCDHB4Q9Y5E5 Y_RNA.555-201ENST00000384673 110 ntBASIC3.49□□□□□ -1.85
PCDHB4Q9Y5E5 MIR7-3-201ENST00000384898 110 ntBASIC3.49□□□□□ -1.85
PCDHB4Q9Y5E5 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
PCDHB4Q9Y5E5 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
PCDHB4Q9Y5E5 RNU4-30P-201ENST00000410245 143 ntBASIC3.49□□□□□ -1.85
PCDHB4Q9Y5E5 AL139156.1-201ENST00000412785 841 ntBASIC3.49□□□□□ -1.85
PCDHB4Q9Y5E5 AL358075.3-201ENST00000426289 226 ntBASIC3.49□□□□□ -1.85
PCDHB4Q9Y5E5 TRIAP1P1-201ENST00000427062 225 ntBASIC3.49□□□□□ -1.85
PCDHB4Q9Y5E5 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDHB4Q9Y5E5 AL161651.1-201ENST00000440882 223 ntBASIC3.49□□□□□ -1.85
PCDHB4Q9Y5E5 AC073901.1-201ENST00000462471 408 ntBASIC3.49□□□□□ -1.85
PCDHB4Q9Y5E5 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDHB4Q9Y5E5 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDHB4Q9Y5E5 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDHB4Q9Y5E5 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDHB4Q9Y5E5 SNORD113-5-201ENST00000607261 78 ntBASIC3.49□□□□□ -1.85
PCDHB4Q9Y5E5 MIR7975-201ENST00000619350 68 ntBASIC3.49□□□□□ -1.85
PCDHB4Q9Y5E5 AC012314.7-201ENST00000619693 93 ntBASIC3.49□□□□□ -1.85
PCDHB4Q9Y5E5 MIR3199-2-201ENST00000636243 86 ntBASIC3.49□□□□□ -1.85
PCDHB4Q9Y5E5 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHB4Q9Y5E5 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHB4Q9Y5E5 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHB4Q9Y5E5 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHB4Q9Y5E5 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDHB4Q9Y5E5 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHB4Q9Y5E5 Y_RNA.200-201ENST00000364018 102 ntBASIC3.48□□□□□ -1.85
PCDHB4Q9Y5E5 MIR23B-201ENST00000384832 97 ntBASIC3.48□□□□□ -1.85
PCDHB4Q9Y5E5 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
PCDHB4Q9Y5E5 RNA5SP390-201ENST00000410191 113 ntBASIC3.48□□□□□ -1.85
PCDHB4Q9Y5E5 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.48□□□□□ -1.85
PCDHB4Q9Y5E5 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.48□□□□□ -1.85
PCDHB4Q9Y5E5 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.48□□□□□ -1.85
PCDHB4Q9Y5E5 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.48□□□□□ -1.85
PCDHB4Q9Y5E5 AC115115.1-201ENST00000449927 248 ntBASIC3.48□□□□□ -1.85
PCDHB4Q9Y5E5 PRSS3P4-201ENST00000453323 162 ntBASIC3.48□□□□□ -1.85
PCDHB4Q9Y5E5 RPL30P14-201ENST00000482744 348 ntBASIC3.48□□□□□ -1.85
PCDHB4Q9Y5E5 RNU6-567P-201ENST00000516746 107 ntBASIC3.48□□□□□ -1.85
PCDHB4Q9Y5E5 AL078605.1-201ENST00000603529 500 ntBASIC3.48□□□□□ -1.85
PCDHB4Q9Y5E5 MIR6076-201ENST00000617521 113 ntBASIC3.48□□□□□ -1.85
PCDHB4Q9Y5E5 FTX_2.1-201ENST00000618816 94 ntBASIC3.48□□□□□ -1.85
PCDHB4Q9Y5E5 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.48□□□□□ -1.85
PCDHB4Q9Y5E5 MIR6075-201ENST00000620782 95 ntBASIC3.48□□□□□ -1.85
PCDHB4Q9Y5E5 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDHB4Q9Y5E5 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
PCDHB4Q9Y5E5 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDHB4Q9Y5E5 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHB4Q9Y5E5 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDHB4Q9Y5E5 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.47□□□□□ -1.85
PCDHB4Q9Y5E5 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHB4Q9Y5E5 RNU6-1159P-201ENST00000362933 107 ntBASIC3.47□□□□□ -1.85
PCDHB4Q9Y5E5 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHB4Q9Y5E5 RNU6-1145P-201ENST00000384246 107 ntBASIC3.47□□□□□ -1.85
PCDHB4Q9Y5E5 SNORA53-201ENST00000391141 249 ntBASIC3.47□□□□□ -1.85
PCDHB4Q9Y5E5 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
PCDHB4Q9Y5E5 AL033519.2-201ENST00000403958 392 ntBASIC3.47□□□□□ -1.85
PCDHB4Q9Y5E5 MIR1298-201ENST00000408783 112 ntBASIC3.47□□□□□ -1.85
PCDHB4Q9Y5E5 RNA5SP229-201ENST00000410809 99 ntBASIC3.47□□□□□ -1.85
PCDHB4Q9Y5E5 RNU4-61P-201ENST00000411243 107 ntBASIC3.47□□□□□ -1.85
PCDHB4Q9Y5E5 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.47□□□□□ -1.85
PCDHB4Q9Y5E5 RN7SL442P-201ENST00000473804 320 ntBASIC3.47□□□□□ -1.85
PCDHB4Q9Y5E5 SEPT14P8-201ENST00000508026 178 ntBASIC3.47□□□□□ -1.85
PCDHB4Q9Y5E5 SNORA31.16-201ENST00000516773 139 ntBASIC3.47□□□□□ -1.85
PCDHB4Q9Y5E5 RNU6-1198P-201ENST00000516904 67 ntBASIC3.47□□□□□ -1.85
PCDHB4Q9Y5E5 AK6P2-201ENST00000549020 471 ntBASIC3.47□□□□□ -1.85
PCDHB4Q9Y5E5 AC002076.2-201ENST00000617362 122 ntBASIC3.47□□□□□ -1.85
PCDHB4Q9Y5E5 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
PCDHB4Q9Y5E5 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHB4Q9Y5E5 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.47□□□□□ -1.85
PCDHB4Q9Y5E5 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHB4Q9Y5E5 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PCDHB4Q9Y5E5 RNU6-873P-201ENST00000363833 107 ntBASIC3.46□□□□□ -1.86
PCDHB4Q9Y5E5 RNU6-961P-201ENST00000363893 105 ntBASIC3.46□□□□□ -1.86
PCDHB4Q9Y5E5 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PCDHB4Q9Y5E5 RNU6-21P-201ENST00000384710 107 ntBASIC3.46□□□□□ -1.86
PCDHB4Q9Y5E5 RNA5SP171-201ENST00000391071 115 ntBASIC3.46□□□□□ -1.86
PCDHB4Q9Y5E5 RNU6-1140P-201ENST00000410517 106 ntBASIC3.46□□□□□ -1.86
PCDHB4Q9Y5E5 RNU5A-5P-201ENST00000411054 116 ntBASIC3.46□□□□□ -1.86
PCDHB4Q9Y5E5 AC023141.4-201ENST00000412031 328 ntBASIC3.46□□□□□ -1.86
PCDHB4Q9Y5E5 RPS26P42-201ENST00000413485 326 ntBASIC3.46□□□□□ -1.86
PCDHB4Q9Y5E5 AC012306.1-201ENST00000423267 114 ntBASIC3.46□□□□□ -1.86
PCDHB4Q9Y5E5 AC117440.1-201ENST00000474107 571 ntBASIC3.46□□□□□ -1.86
PCDHB4Q9Y5E5 RPL32P34-201ENST00000486380 400 ntBASIC3.46□□□□□ -1.86
PCDHB4Q9Y5E5 SNORA40.9-201ENST00000515895 93 ntBASIC3.46□□□□□ -1.86
PCDHB4Q9Y5E5 RNU7-110P-201ENST00000516891 62 ntBASIC3.46□□□□□ -1.86
PCDHB4Q9Y5E5 RN7SKP40-201ENST00000517211 242 ntBASIC3.46□□□□□ -1.86
PCDHB4Q9Y5E5 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDHB4Q9Y5E5 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDHB4Q9Y5E5 AC004792.1-201ENST00000614523 137 ntBASIC3.46□□□□□ -1.86
PCDHB4Q9Y5E5 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDHB4Q9Y5E5 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PCDHB4Q9Y5E5 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
PCDHB4Q9Y5E5 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.46□□□□□ -1.86
PCDHB4Q9Y5E5 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDHB4Q9Y5E5 MAPK10-362ENST00000641864 4484 ntBASIC3.45□□□□□ -1.86
PCDHB4Q9Y5E5 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
PCDHB4Q9Y5E5 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms