Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 AK3P2-201ENST00000507976 429 ntBASIC1.21□□□□□ -2.22
LRRC42Q9Y546 SNORA31.17-201ENST00000516953 127 ntBASIC1.21□□□□□ -2.22
LRRC42Q9Y546 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.21□□□□□ -2.22
LRRC42Q9Y546 AL137161.1-201ENST00000532231 390 ntBASIC1.21□□□□□ -2.22
LRRC42Q9Y546 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.21□□□□□ -2.22
LRRC42Q9Y546 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.21□□□□□ -2.22
LRRC42Q9Y546 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.21□□□□□ -2.22
LRRC42Q9Y546 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.21□□□□□ -2.22
LRRC42Q9Y546 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.21□□□□□ -2.22
LRRC42Q9Y546 MTATP6P3-201ENST00000581686 676 ntBASIC1.21□□□□□ -2.22
LRRC42Q9Y546 AC040904.1-201ENST00000590850 223 ntBASIC1.21□□□□□ -2.22
LRRC42Q9Y546 AL356157.2-201ENST00000605122 111 ntBASIC1.21□□□□□ -2.22
LRRC42Q9Y546 AC072046.2-201ENST00000618366 268 ntBASIC1.21□□□□□ -2.22
LRRC42Q9Y546 AC120349.3-201ENST00000624377 529 ntBASIC1.21□□□□□ -2.22
LRRC42Q9Y546 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
LRRC42Q9Y546 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
LRRC42Q9Y546 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
LRRC42Q9Y546 RNU4-13P-201ENST00000364019 141 ntBASIC1.2□□□□□ -2.22
LRRC42Q9Y546 RNU4-56P-201ENST00000364700 142 ntBASIC1.2□□□□□ -2.22
LRRC42Q9Y546 RNU6-60P-201ENST00000364792 103 ntBASIC1.2□□□□□ -2.22
LRRC42Q9Y546 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.2□□□□□ -2.22
LRRC42Q9Y546 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
LRRC42Q9Y546 RNU6-203P-201ENST00000384038 104 ntBASIC1.2□□□□□ -2.22
LRRC42Q9Y546 RNU6-348P-201ENST00000384386 107 ntBASIC1.2□□□□□ -2.22
LRRC42Q9Y546 SNORA12.2-201ENST00000391040 156 ntBASIC1.2□□□□□ -2.22
LRRC42Q9Y546 MTATP6P18-201ENST00000417994 673 ntBASIC1.2□□□□□ -2.22
LRRC42Q9Y546 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.2□□□□□ -2.22
LRRC42Q9Y546 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.2□□□□□ -2.22
LRRC42Q9Y546 RPS6P15-201ENST00000431996 751 ntBASIC1.2□□□□□ -2.22
LRRC42Q9Y546 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.2□□□□□ -2.22
LRRC42Q9Y546 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.2□□□□□ -2.22
LRRC42Q9Y546 SNRPFP3-201ENST00000457792 225 ntBASIC1.2□□□□□ -2.22
LRRC42Q9Y546 AC007547.1-201ENST00000462177 490 ntBASIC1.2□□□□□ -2.22
LRRC42Q9Y546 AC079140.5-201ENST00000507882 310 ntBASIC1.2□□□□□ -2.22
LRRC42Q9Y546 RPL23AP94-201ENST00000512518 302 ntBASIC1.2□□□□□ -2.22
LRRC42Q9Y546 AC105417.1-201ENST00000514691 285 ntBASIC1.2□□□□□ -2.22
LRRC42Q9Y546 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.2□□□□□ -2.22
LRRC42Q9Y546 RNU6-902P-201ENST00000517212 91 ntBASIC1.2□□□□□ -2.22
LRRC42Q9Y546 MTCO2P4-201ENST00000517968 247 ntBASIC1.2□□□□□ -2.22
LRRC42Q9Y546 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.2□□□□□ -2.22
LRRC42Q9Y546 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
LRRC42Q9Y546 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.2□□□□□ -2.22
LRRC42Q9Y546 HIF1AP1-201ENST00000553642 175 ntBASIC1.2□□□□□ -2.22
LRRC42Q9Y546 AC109446.1-201ENST00000566172 220 ntBASIC1.2□□□□□ -2.22
LRRC42Q9Y546 MIR3923-201ENST00000579521 83 ntBASIC1.2□□□□□ -2.22
LRRC42Q9Y546 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.2□□□□□ -2.22
LRRC42Q9Y546 MIR3945-201ENST00000581853 98 ntBASIC1.2□□□□□ -2.22
LRRC42Q9Y546 AP001836.1-201ENST00000604675 523 ntBASIC1.2□□□□□ -2.22
LRRC42Q9Y546 PCGEM1.1-201ENST00000613431 131 ntBASIC1.2□□□□□ -2.22
LRRC42Q9Y546 SNORA43.4-201ENST00000629559 138 ntBASIC1.2□□□□□ -2.22
LRRC42Q9Y546 MTND5P9-201ENST00000503854 1755 ntBASIC1.2□□□□□ -2.22
LRRC42Q9Y546 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
LRRC42Q9Y546 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.19□□□□□ -2.22
LRRC42Q9Y546 RNU6-1120P-201ENST00000362988 108 ntBASIC1.19□□□□□ -2.22
LRRC42Q9Y546 RNA5SP190-201ENST00000365222 118 ntBASIC1.19□□□□□ -2.22
LRRC42Q9Y546 SNORA32.2-201ENST00000384049 122 ntBASIC1.19□□□□□ -2.22
LRRC42Q9Y546 SNORA36A-201ENST00000384221 132 ntBASIC1.19□□□□□ -2.22
LRRC42Q9Y546 MTCO3P41-201ENST00000414801 328 ntBASIC1.19□□□□□ -2.22
LRRC42Q9Y546 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.19□□□□□ -2.22
LRRC42Q9Y546 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.19□□□□□ -2.22
LRRC42Q9Y546 SNRPEP8-201ENST00000442866 260 ntBASIC1.19□□□□□ -2.22
LRRC42Q9Y546 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.19□□□□□ -2.22
LRRC42Q9Y546 RPS29P28-201ENST00000446439 141 ntBASIC1.19□□□□□ -2.22
LRRC42Q9Y546 RNU7-180P-201ENST00000459240 63 ntBASIC1.19□□□□□ -2.22
LRRC42Q9Y546 snoU13.26-201ENST00000459452 105 ntBASIC1.19□□□□□ -2.22
LRRC42Q9Y546 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.19□□□□□ -2.22
LRRC42Q9Y546 AC016632.1-201ENST00000503994 196 ntBASIC1.19□□□□□ -2.22
LRRC42Q9Y546 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.19□□□□□ -2.22
LRRC42Q9Y546 AC069113.1-201ENST00000517763 267 ntBASIC1.19□□□□□ -2.22
LRRC42Q9Y546 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.19□□□□□ -2.22
LRRC42Q9Y546 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.19□□□□□ -2.22
LRRC42Q9Y546 AL391840.1-201ENST00000571144 367 ntBASIC1.19□□□□□ -2.22
LRRC42Q9Y546 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.19□□□□□ -2.22
LRRC42Q9Y546 Z98751.3-201ENST00000604447 521 ntBASIC1.19□□□□□ -2.22
LRRC42Q9Y546 AC008536.2-201ENST00000607284 349 ntBASIC1.19□□□□□ -2.22
LRRC42Q9Y546 AL355802.3-201ENST00000607571 545 ntBASIC1.19□□□□□ -2.22
LRRC42Q9Y546 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
LRRC42Q9Y546 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.18□□□□□ -2.22
LRRC42Q9Y546 U3.9-201ENST00000363823 204 ntBASIC1.18□□□□□ -2.22
LRRC42Q9Y546 RNU6-378P-201ENST00000384324 107 ntBASIC1.18□□□□□ -2.22
LRRC42Q9Y546 RNU6-517P-201ENST00000384362 110 ntBASIC1.18□□□□□ -2.22
LRRC42Q9Y546 MIR23A-201ENST00000385245 73 ntBASIC1.18□□□□□ -2.22
LRRC42Q9Y546 MIR618-201ENST00000385287 98 ntBASIC1.18□□□□□ -2.22
LRRC42Q9Y546 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.18□□□□□ -2.22
LRRC42Q9Y546 NCOR1P3-201ENST00000420479 303 ntBASIC1.18□□□□□ -2.22
LRRC42Q9Y546 MRPL35P3-201ENST00000421557 364 ntBASIC1.18□□□□□ -2.22
LRRC42Q9Y546 MTCYBP8-201ENST00000422855 651 ntBASIC1.18□□□□□ -2.22
LRRC42Q9Y546 AC139712.2-201ENST00000424302 339 ntBASIC1.18□□□□□ -2.22
LRRC42Q9Y546 MTCO1P44-201ENST00000441935 243 ntBASIC1.18□□□□□ -2.22
LRRC42Q9Y546 USP9YP29-201ENST00000445112 563 ntBASIC1.18□□□□□ -2.22
LRRC42Q9Y546 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.18□□□□□ -2.22
LRRC42Q9Y546 TOMM22P6-201ENST00000465035 409 ntBASIC1.18□□□□□ -2.22
LRRC42Q9Y546 AC005908.1-201ENST00000468701 347 ntBASIC1.18□□□□□ -2.22
LRRC42Q9Y546 MTCYBP18-201ENST00000501056 747 ntBASIC1.18□□□□□ -2.22
LRRC42Q9Y546 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.18□□□□□ -2.22
LRRC42Q9Y546 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.18□□□□□ -2.22
LRRC42Q9Y546 RNU6-1098P-201ENST00000516772 96 ntBASIC1.18□□□□□ -2.22
LRRC42Q9Y546 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.18□□□□□ -2.22
LRRC42Q9Y546 AC090115.3-201ENST00000553218 849 ntBASIC1.18□□□□□ -2.22
LRRC42Q9Y546 MIR3941-201ENST00000582572 103 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms