Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.35□□□□□ -1.71
NOD1Q9Y239 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
NOD1Q9Y239 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
NOD1Q9Y239 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NOD1Q9Y239 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NOD1Q9Y239 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NOD1Q9Y239 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
NOD1Q9Y239 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.34□□□□□ -1.71
NOD1Q9Y239 Y_RNA.215-201ENST00000364204 112 ntBASIC4.34□□□□□ -1.71
NOD1Q9Y239 RNU6-959P-201ENST00000384671 107 ntBASIC4.34□□□□□ -1.71
NOD1Q9Y239 Y_RNA.568-201ENST00000384742 113 ntBASIC4.34□□□□□ -1.71
NOD1Q9Y239 AL031003.1-201ENST00000404229 172 ntBASIC4.34□□□□□ -1.71
NOD1Q9Y239 AL135790.2-201ENST00000437701 267 ntBASIC4.34□□□□□ -1.71
NOD1Q9Y239 RN7SL271P-201ENST00000487601 295 ntBASIC4.34□□□□□ -1.71
NOD1Q9Y239 Y_RNA.797-201ENST00000515977 94 ntBASIC4.34□□□□□ -1.71
NOD1Q9Y239 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.34□□□□□ -1.71
NOD1Q9Y239 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NOD1Q9Y239 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.34□□□□□ -1.72
NOD1Q9Y239 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.34□□□□□ -1.72
NOD1Q9Y239 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
NOD1Q9Y239 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
NOD1Q9Y239 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
NOD1Q9Y239 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.33□□□□□ -1.72
NOD1Q9Y239 SNORD115-30-201ENST00000364117 82 ntBASIC4.33□□□□□ -1.72
NOD1Q9Y239 U1.1-201ENST00000384101 164 ntBASIC4.33□□□□□ -1.72
NOD1Q9Y239 RNU6-22P-201ENST00000384355 107 ntBASIC4.33□□□□□ -1.72
NOD1Q9Y239 SNORA26.5-201ENST00000391215 123 ntBASIC4.33□□□□□ -1.72
NOD1Q9Y239 RNU6-381P-201ENST00000391259 108 ntBASIC4.33□□□□□ -1.72
NOD1Q9Y239 AL035423.1-201ENST00000420331 213 ntBASIC4.33□□□□□ -1.72
NOD1Q9Y239 HMGN2P20-201ENST00000437531 273 ntBASIC4.33□□□□□ -1.72
NOD1Q9Y239 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.33□□□□□ -1.72
NOD1Q9Y239 SNORD116-25-201ENST00000516517 92 ntBASIC4.33□□□□□ -1.72
NOD1Q9Y239 RNU6-62P-201ENST00000516526 102 ntBASIC4.33□□□□□ -1.72
NOD1Q9Y239 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.33□□□□□ -1.72
NOD1Q9Y239 AC007179.3-201ENST00000604976 235 ntBASIC4.33□□□□□ -1.72
NOD1Q9Y239 U3.45-201ENST00000607547 219 ntBASIC4.33□□□□□ -1.72
NOD1Q9Y239 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NOD1Q9Y239 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NOD1Q9Y239 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.33□□□□□ -1.72
NOD1Q9Y239 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
NOD1Q9Y239 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
NOD1Q9Y239 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.32□□□□□ -1.72
NOD1Q9Y239 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NOD1Q9Y239 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
NOD1Q9Y239 AC093908.1-201ENST00000623125 8092 ntBASIC4.32□□□□□ -1.72
NOD1Q9Y239 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.32□□□□□ -1.72
NOD1Q9Y239 AC010329.5-201ENST00000623497 2174 ntBASIC4.32□□□□□ -1.72
NOD1Q9Y239 RNU6-275P-201ENST00000364910 107 ntBASIC4.32□□□□□ -1.72
NOD1Q9Y239 SNORD50B-201ENST00000364995 70 ntBASIC4.32□□□□□ -1.72
NOD1Q9Y239 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.32□□□□□ -1.72
NOD1Q9Y239 RNU6-417P-201ENST00000384712 107 ntBASIC4.32□□□□□ -1.72
NOD1Q9Y239 MIR483-201ENST00000385070 76 ntBASIC4.32□□□□□ -1.72
NOD1Q9Y239 MIR34B-201ENST00000385076 84 ntBASIC4.32□□□□□ -1.72
NOD1Q9Y239 RNU6-750P-201ENST00000390946 107 ntBASIC4.32□□□□□ -1.72
NOD1Q9Y239 RNA5SP504-201ENST00000410676 117 ntBASIC4.32□□□□□ -1.72
NOD1Q9Y239 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.32□□□□□ -1.72
NOD1Q9Y239 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.32□□□□□ -1.72
NOD1Q9Y239 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.32□□□□□ -1.72
NOD1Q9Y239 RPS3P1-201ENST00000456781 192 ntBASIC4.32□□□□□ -1.72
NOD1Q9Y239 AC091179.1-201ENST00000461606 579 ntBASIC4.32□□□□□ -1.72
NOD1Q9Y239 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.32□□□□□ -1.72
NOD1Q9Y239 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.32□□□□□ -1.72
NOD1Q9Y239 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.32□□□□□ -1.72
NOD1Q9Y239 RNU2-44P-201ENST00000516795 194 ntBASIC4.32□□□□□ -1.72
NOD1Q9Y239 YPEL5P3-201ENST00000547227 352 ntBASIC4.32□□□□□ -1.72
NOD1Q9Y239 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.32□□□□□ -1.72
NOD1Q9Y239 AC013791.1-201ENST00000616619 62 ntBASIC4.32□□□□□ -1.72
NOD1Q9Y239 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.32□□□□□ -1.72
NOD1Q9Y239 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.32□□□□□ -1.72
NOD1Q9Y239 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NOD1Q9Y239 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
NOD1Q9Y239 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
NOD1Q9Y239 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NOD1Q9Y239 AF127577.6-201ENST00000623352 2191 ntBASIC4.31□□□□□ -1.72
NOD1Q9Y239 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.31□□□□□ -1.72
NOD1Q9Y239 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
NOD1Q9Y239 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.31□□□□□ -1.72
NOD1Q9Y239 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
NOD1Q9Y239 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.31□□□□□ -1.72
NOD1Q9Y239 AC002546.1-201ENST00000588041 2504 ntBASIC4.31□□□□□ -1.72
NOD1Q9Y239 RNU1-75P-201ENST00000347264 129 ntBASIC4.31□□□□□ -1.72
NOD1Q9Y239 RNU6-655P-201ENST00000362858 107 ntBASIC4.31□□□□□ -1.72
NOD1Q9Y239 RNU6-1210P-201ENST00000363775 107 ntBASIC4.31□□□□□ -1.72
NOD1Q9Y239 RNU6-151P-201ENST00000364158 107 ntBASIC4.31□□□□□ -1.72
NOD1Q9Y239 SNORA71B-202ENST00000439232 272 ntBASIC4.31□□□□□ -1.72
NOD1Q9Y239 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC4.31□□□□□ -1.72
NOD1Q9Y239 AC022695.1-201ENST00000522089 237 ntBASIC4.31□□□□□ -1.72
NOD1Q9Y239 AC100770.1-201ENST00000532310 322 ntBASIC4.31□□□□□ -1.72
NOD1Q9Y239 AC021269.2-201ENST00000532318 330 ntBASIC4.31□□□□□ -1.72
NOD1Q9Y239 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.31□□□□□ -1.72
NOD1Q9Y239 GNRHR2P1-201ENST00000555315 631 ntBASIC4.31□□□□□ -1.72
NOD1Q9Y239 AL138880.2-201ENST00000616214 239 ntBASIC4.31□□□□□ -1.72
NOD1Q9Y239 Y_RNA.778-201ENST00000620203 90 ntBASIC4.31□□□□□ -1.72
NOD1Q9Y239 UBE3AP2-201ENST00000429033 2259 ntBASIC4.31□□□□□ -1.72
NOD1Q9Y239 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
NOD1Q9Y239 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.31□□□□□ -1.72
NOD1Q9Y239 AC134026.1-201ENST00000623249 2239 ntBASIC4.3□□□□□ -1.72
NOD1Q9Y239 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
NOD1Q9Y239 RNA5SP72-201ENST00000364442 117 ntBASIC4.3□□□□□ -1.72
NOD1Q9Y239 Y_RNA.287-201ENST00000364853 94 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 188.8 ms