Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 AL691447.3-201ENST00000635020 330 ntBASIC3.12□□□□□ -1.91
SCAF8Q9UPN6 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
SCAF8Q9UPN6 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SCAF8Q9UPN6 Y_RNA.48-201ENST00000362710 103 ntBASIC3.11□□□□□ -1.91
SCAF8Q9UPN6 Y_RNA.557-201ENST00000384680 107 ntBASIC3.11□□□□□ -1.91
SCAF8Q9UPN6 MIR147B-201ENST00000390185 80 ntBASIC3.11□□□□□ -1.91
SCAF8Q9UPN6 Y_RNA.645-201ENST00000391229 102 ntBASIC3.11□□□□□ -1.91
SCAF8Q9UPN6 RPS29P13-201ENST00000402041 169 ntBASIC3.11□□□□□ -1.91
SCAF8Q9UPN6 RNU4-53P-201ENST00000410828 140 ntBASIC3.11□□□□□ -1.91
SCAF8Q9UPN6 HMGB3P2-201ENST00000411913 584 ntBASIC3.11□□□□□ -1.91
SCAF8Q9UPN6 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.11□□□□□ -1.91
SCAF8Q9UPN6 AL117339.3-201ENST00000418733 162 ntBASIC3.11□□□□□ -1.91
SCAF8Q9UPN6 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.11□□□□□ -1.91
SCAF8Q9UPN6 MTCYBP9-201ENST00000431021 303 ntBASIC3.11□□□□□ -1.91
SCAF8Q9UPN6 AL591043.1-201ENST00000432461 424 ntBASIC3.11□□□□□ -1.91
SCAF8Q9UPN6 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.11□□□□□ -1.91
SCAF8Q9UPN6 UQCRHP3-201ENST00000451503 251 ntBASIC3.11□□□□□ -1.91
SCAF8Q9UPN6 RPL31P41-201ENST00000477967 372 ntBASIC3.11□□□□□ -1.91
SCAF8Q9UPN6 MTCO2P24-201ENST00000515611 426 ntBASIC3.11□□□□□ -1.91
SCAF8Q9UPN6 GNAI2P1-201ENST00000541815 315 ntBASIC3.11□□□□□ -1.91
SCAF8Q9UPN6 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SCAF8Q9UPN6 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.11□□□□□ -1.91
SCAF8Q9UPN6 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.11□□□□□ -1.91
SCAF8Q9UPN6 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.11□□□□□ -1.91
SCAF8Q9UPN6 AC008269.2-201ENST00000561915 1105 ntBASIC3.11□□□□□ -1.91
SCAF8Q9UPN6 SUB1P3-201ENST00000564581 315 ntBASIC3.11□□□□□ -1.91
SCAF8Q9UPN6 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.11□□□□□ -1.91
SCAF8Q9UPN6 MIR3976-201ENST00000606807 139 ntBASIC3.11□□□□□ -1.91
SCAF8Q9UPN6 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.11□□□□□ -1.91
SCAF8Q9UPN6 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.11□□□□□ -1.91
SCAF8Q9UPN6 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.11□□□□□ -1.91
SCAF8Q9UPN6 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SCAF8Q9UPN6 AL161431.1-201ENST00000618966 4205 ntBASIC3.11□□□□□ -1.91
SCAF8Q9UPN6 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SCAF8Q9UPN6 AC005592.1-201ENST00000566527 1640 ntBASIC3.11□□□□□ -1.91
SCAF8Q9UPN6 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
SCAF8Q9UPN6 RNU6-858P-201ENST00000362436 107 ntBASIC3.1□□□□□ -1.91
SCAF8Q9UPN6 RNU6-1083P-201ENST00000384022 107 ntBASIC3.1□□□□□ -1.91
SCAF8Q9UPN6 Y_RNA.455-201ENST00000384230 98 ntBASIC3.1□□□□□ -1.91
SCAF8Q9UPN6 MIR518C-201ENST00000384822 101 ntBASIC3.1□□□□□ -1.91
SCAF8Q9UPN6 RPL19P1-201ENST00000411635 428 ntBASIC3.1□□□□□ -1.91
SCAF8Q9UPN6 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.1□□□□□ -1.91
SCAF8Q9UPN6 AC074117.2-201ENST00000417130 397 ntBASIC3.1□□□□□ -1.91
SCAF8Q9UPN6 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.1□□□□□ -1.91
SCAF8Q9UPN6 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.1□□□□□ -1.91
SCAF8Q9UPN6 AL031274.1-201ENST00000450334 232 ntBASIC3.1□□□□□ -1.91
SCAF8Q9UPN6 AC022447.4-201ENST00000504053 364 ntBASIC3.1□□□□□ -1.91
SCAF8Q9UPN6 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.1□□□□□ -1.91
SCAF8Q9UPN6 ACA59.1-201ENST00000515966 143 ntBASIC3.1□□□□□ -1.91
SCAF8Q9UPN6 RNU4-77P-201ENST00000516692 156 ntBASIC3.1□□□□□ -1.91
SCAF8Q9UPN6 MIR4635-201ENST00000583759 79 ntBASIC3.1□□□□□ -1.91
SCAF8Q9UPN6 AC020895.1-201ENST00000595362 272 ntBASIC3.1□□□□□ -1.91
SCAF8Q9UPN6 AC008739.2-201ENST00000597006 317 ntBASIC3.1□□□□□ -1.91
SCAF8Q9UPN6 AC009314.1-201ENST00000603871 304 ntBASIC3.1□□□□□ -1.91
SCAF8Q9UPN6 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.09□□□□□ -1.91
SCAF8Q9UPN6 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
SCAF8Q9UPN6 RPL9P7-201ENST00000330965 580 ntBASIC3.09□□□□□ -1.91
SCAF8Q9UPN6 RNU6-1317P-201ENST00000364582 104 ntBASIC3.09□□□□□ -1.91
SCAF8Q9UPN6 RNU6-827P-201ENST00000365553 106 ntBASIC3.09□□□□□ -1.91
SCAF8Q9UPN6 Y_RNA.485-201ENST00000384395 102 ntBASIC3.09□□□□□ -1.91
SCAF8Q9UPN6 RNU6-933P-201ENST00000384424 107 ntBASIC3.09□□□□□ -1.91
SCAF8Q9UPN6 SNORD116-20-201ENST00000384529 92 ntBASIC3.09□□□□□ -1.91
SCAF8Q9UPN6 AL513475.1-201ENST00000406602 315 ntBASIC3.09□□□□□ -1.91
SCAF8Q9UPN6 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.09□□□□□ -1.91
SCAF8Q9UPN6 RNU2-23P-201ENST00000410545 195 ntBASIC3.09□□□□□ -1.91
SCAF8Q9UPN6 AC096644.2-201ENST00000429278 159 ntBASIC3.09□□□□□ -1.91
SCAF8Q9UPN6 AL353997.1-201ENST00000432936 108 ntBASIC3.09□□□□□ -1.91
SCAF8Q9UPN6 RPS29P6-201ENST00000438196 145 ntBASIC3.09□□□□□ -1.91
SCAF8Q9UPN6 AC099799.1-201ENST00000439809 192 ntBASIC3.09□□□□□ -1.91
SCAF8Q9UPN6 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.09□□□□□ -1.91
SCAF8Q9UPN6 RPL9P9-202ENST00000466501 579 ntBASIC3.09□□□□□ -1.91
SCAF8Q9UPN6 RPL17P19-201ENST00000489069 552 ntBASIC3.09□□□□□ -1.91
SCAF8Q9UPN6 RPL23AP49-201ENST00000492925 468 ntBASIC3.09□□□□□ -1.91
SCAF8Q9UPN6 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.09□□□□□ -1.91
SCAF8Q9UPN6 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.09□□□□□ -1.91
SCAF8Q9UPN6 AC105758.1-201ENST00000506038 399 ntBASIC3.09□□□□□ -1.91
SCAF8Q9UPN6 CKS1BP7-201ENST00000522230 235 ntBASIC3.09□□□□□ -1.91
SCAF8Q9UPN6 CBX3P8-201ENST00000532412 525 ntBASIC3.09□□□□□ -1.91
SCAF8Q9UPN6 AC113195.1-201ENST00000579952 141 ntBASIC3.09□□□□□ -1.91
SCAF8Q9UPN6 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.09□□□□□ -1.91
SCAF8Q9UPN6 MIR4273-201ENST00000582824 84 ntBASIC3.09□□□□□ -1.91
SCAF8Q9UPN6 AL356157.2-201ENST00000605122 111 ntBASIC3.09□□□□□ -1.91
SCAF8Q9UPN6 AC025754.2-201ENST00000606491 432 ntBASIC3.09□□□□□ -1.91
SCAF8Q9UPN6 AC010329.5-201ENST00000623497 2174 ntBASIC3.09□□□□□ -1.91
SCAF8Q9UPN6 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.92
SCAF8Q9UPN6 AC091812.1-201ENST00000432235 1948 ntBASIC3.09□□□□□ -1.92
SCAF8Q9UPN6 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
SCAF8Q9UPN6 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
SCAF8Q9UPN6 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SCAF8Q9UPN6 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SCAF8Q9UPN6 RNU6-527P-201ENST00000363425 104 ntBASIC3.08□□□□□ -1.92
SCAF8Q9UPN6 Y_RNA.149-201ENST00000363558 117 ntBASIC3.08□□□□□ -1.92
SCAF8Q9UPN6 Y_RNA.153-201ENST00000363615 91 ntBASIC3.08□□□□□ -1.92
SCAF8Q9UPN6 RNU6-105P-201ENST00000363909 104 ntBASIC3.08□□□□□ -1.92
SCAF8Q9UPN6 RNU6-1245P-201ENST00000411130 106 ntBASIC3.08□□□□□ -1.92
SCAF8Q9UPN6 RN7SL75P-201ENST00000461926 281 ntBASIC3.08□□□□□ -1.92
SCAF8Q9UPN6 FO393415.2-201ENST00000480085 343 ntBASIC3.08□□□□□ -1.92
SCAF8Q9UPN6 RPL22P13-201ENST00000493291 347 ntBASIC3.08□□□□□ -1.92
SCAF8Q9UPN6 AC114801.2-201ENST00000503825 781 ntBASIC3.08□□□□□ -1.92
SCAF8Q9UPN6 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms