Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 IPO8P1-201ENST00000455509 3109 ntBASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 RNU1-62P-201ENST00000362599 164 ntBASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 Y_RNA.82-201ENST00000363000 102 ntBASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 Y_RNA.92-201ENST00000363043 102 ntBASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 RNU1-18P-201ENST00000363062 164 ntBASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 Y_RNA.150-201ENST00000363562 102 ntBASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 Y_RNA.179-201ENST00000363844 90 ntBASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 Y_RNA.235-201ENST00000364412 102 ntBASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 Y_RNA.306-201ENST00000365015 102 ntBASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 Y_RNA.312-201ENST00000365089 102 ntBASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 Y_RNA.322-201ENST00000365151 102 ntBASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 Y_RNA.418-201ENST00000384029 102 ntBASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 AP000567.1-201ENST00000406413 156 ntBASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 RNA5SP201-201ENST00000410316 124 ntBASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 RNU4-61P-201ENST00000411243 107 ntBASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 ELOCP21-201ENST00000412558 336 ntBASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 RPL23AP36-201ENST00000413895 458 ntBASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 AC138623.1-201ENST00000418060 216 ntBASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 AL365496.1-201ENST00000426885 215 ntBASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 AC104332.1-201ENST00000440471 797 ntBASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 Y_RNA.650-201ENST00000459002 102 ntBASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 RNU7-120P-201ENST00000459334 63 ntBASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 AC026784.1-201ENST00000507986 352 ntBASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 Y_RNA.777-201ENST00000516982 102 ntBASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 MIR3923-201ENST00000579521 83 ntBASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 MIR4513-201ENST00000581077 86 ntBASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 Y_RNA.771-201ENST00000598668 102 ntBASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 Y_RNA.789-201ENST00000622480 102 ntBASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 AC099654.7-201ENST00000635788 2127 ntBASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CDC42EP3Q9UKI2 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDC42EP3Q9UKI2 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CDC42EP3Q9UKI2 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.18□□□□□ -1.9
CDC42EP3Q9UKI2 SNORA25.1-201ENST00000362326 128 ntBASIC3.18□□□□□ -1.9
CDC42EP3Q9UKI2 Y_RNA.270-201ENST00000364693 104 ntBASIC3.18□□□□□ -1.9
CDC42EP3Q9UKI2 RNU4-56P-201ENST00000364700 142 ntBASIC3.18□□□□□ -1.9
CDC42EP3Q9UKI2 RNU6-793P-201ENST00000384233 104 ntBASIC3.18□□□□□ -1.9
CDC42EP3Q9UKI2 HMGN2P8-201ENST00000391458 268 ntBASIC3.18□□□□□ -1.9
CDC42EP3Q9UKI2 CBX3P9-201ENST00000402326 552 ntBASIC3.18□□□□□ -1.9
CDC42EP3Q9UKI2 Y_RNA.793-201ENST00000411222 111 ntBASIC3.18□□□□□ -1.9
CDC42EP3Q9UKI2 Y_RNA.626-201ENST00000411288 95 ntBASIC3.18□□□□□ -1.9
CDC42EP3Q9UKI2 RPL19P1-201ENST00000411635 428 ntBASIC3.18□□□□□ -1.9
CDC42EP3Q9UKI2 MTCO1P5-201ENST00000433573 344 ntBASIC3.18□□□□□ -1.9
CDC42EP3Q9UKI2 RPL23AP62-201ENST00000463396 453 ntBASIC3.18□□□□□ -1.9
CDC42EP3Q9UKI2 AC091179.3-201ENST00000474761 144 ntBASIC3.18□□□□□ -1.9
CDC42EP3Q9UKI2 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.18□□□□□ -1.9
CDC42EP3Q9UKI2 SNORA27.4-201ENST00000516650 95 ntBASIC3.18□□□□□ -1.9
CDC42EP3Q9UKI2 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.18□□□□□ -1.9
CDC42EP3Q9UKI2 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.18□□□□□ -1.9
CDC42EP3Q9UKI2 AC018448.1-201ENST00000552843 316 ntBASIC3.18□□□□□ -1.9
CDC42EP3Q9UKI2 MIR3186-201ENST00000577404 85 ntBASIC3.18□□□□□ -1.9
CDC42EP3Q9UKI2 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.18□□□□□ -1.9
CDC42EP3Q9UKI2 AL034555.1-201ENST00000604816 211 ntBASIC3.18□□□□□ -1.9
CDC42EP3Q9UKI2 AL137843.1-201ENST00000605078 385 ntBASIC3.18□□□□□ -1.9
CDC42EP3Q9UKI2 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.18□□□□□ -1.9
CDC42EP3Q9UKI2 AC007496.3-201ENST00000624987 3443 ntBASIC3.18□□□□□ -1.9
CDC42EP3Q9UKI2 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDC42EP3Q9UKI2 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDC42EP3Q9UKI2 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDC42EP3Q9UKI2 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDC42EP3Q9UKI2 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.17□□□□□ -1.9
CDC42EP3Q9UKI2 RNA5SP295-201ENST00000362655 121 ntBASIC3.17□□□□□ -1.9
CDC42EP3Q9UKI2 Y_RNA.292-201ENST00000364904 97 ntBASIC3.17□□□□□ -1.9
CDC42EP3Q9UKI2 Y_RNA.331-201ENST00000365267 102 ntBASIC3.17□□□□□ -1.9
CDC42EP3Q9UKI2 U1.1-201ENST00000384101 164 ntBASIC3.17□□□□□ -1.9
CDC42EP3Q9UKI2 AL133475.1-201ENST00000404414 305 ntBASIC3.17□□□□□ -1.9
CDC42EP3Q9UKI2 AL441985.1-201ENST00000457727 251 ntBASIC3.17□□□□□ -1.9
CDC42EP3Q9UKI2 SNORD105B-201ENST00000458770 79 ntBASIC3.17□□□□□ -1.9
CDC42EP3Q9UKI2 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.17□□□□□ -1.9
CDC42EP3Q9UKI2 RN7SL601P-201ENST00000471221 293 ntBASIC3.17□□□□□ -1.9
CDC42EP3Q9UKI2 AC091959.1-201ENST00000495857 238 ntBASIC3.17□□□□□ -1.9
CDC42EP3Q9UKI2 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.17□□□□□ -1.9
CDC42EP3Q9UKI2 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.17□□□□□ -1.9
CDC42EP3Q9UKI2 YPEL5P3-201ENST00000547227 352 ntBASIC3.17□□□□□ -1.9
CDC42EP3Q9UKI2 PCGEM1.1-201ENST00000613431 131 ntBASIC3.17□□□□□ -1.9
CDC42EP3Q9UKI2 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.17□□□□□ -1.9
CDC42EP3Q9UKI2 IGHVIII-44-202ENST00000636235 289 ntBASIC3.17□□□□□ -1.9
CDC42EP3Q9UKI2 MIR7153-201ENST00000637758 57 ntBASIC3.17□□□□□ -1.9
CDC42EP3Q9UKI2 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDC42EP3Q9UKI2 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDC42EP3Q9UKI2 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDC42EP3Q9UKI2 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CDC42EP3Q9UKI2 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CDC42EP3Q9UKI2 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDC42EP3Q9UKI2 SNORD114-19-201ENST00000363072 75 ntBASIC3.16□□□□□ -1.9
CDC42EP3Q9UKI2 Y_RNA.383-201ENST00000383855 97 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 165.2 ms