Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.08□□□□□ -1.76
CNTN3Q9P232 LINC02471-203ENST00000641941 4752 ntBASIC4.08□□□□□ -1.76
CNTN3Q9P232 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CNTN3Q9P232 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.07□□□□□ -1.76
CNTN3Q9P232 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CNTN3Q9P232 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CNTN3Q9P232 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CNTN3Q9P232 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CNTN3Q9P232 SNORA73.2-201ENST00000364946 201 ntBASIC4.07□□□□□ -1.76
CNTN3Q9P232 RNU6-1264P-201ENST00000383891 107 ntBASIC4.07□□□□□ -1.76
CNTN3Q9P232 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.07□□□□□ -1.76
CNTN3Q9P232 AC245291.1-201ENST00000419501 328 ntBASIC4.07□□□□□ -1.76
CNTN3Q9P232 BTF3P11-201ENST00000426582 477 ntBASIC4.07□□□□□ -1.76
CNTN3Q9P232 snoU13.28-201ENST00000459235 104 ntBASIC4.07□□□□□ -1.76
CNTN3Q9P232 AP002884.2-201ENST00000471647 395 ntBASIC4.07□□□□□ -1.76
CNTN3Q9P232 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CNTN3Q9P232 RNA5SP208-201ENST00000516156 78 ntBASIC4.07□□□□□ -1.76
CNTN3Q9P232 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.07□□□□□ -1.76
CNTN3Q9P232 AC027176.1-201ENST00000560204 514 ntBASIC4.07□□□□□ -1.76
CNTN3Q9P232 AL008718.3-201ENST00000610217 321 ntBASIC4.07□□□□□ -1.76
CNTN3Q9P232 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.07□□□□□ -1.76
CNTN3Q9P232 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CNTN3Q9P232 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CNTN3Q9P232 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CNTN3Q9P232 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CNTN3Q9P232 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CNTN3Q9P232 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CNTN3Q9P232 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
CNTN3Q9P232 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CNTN3Q9P232 Y_RNA.23-201ENST00000362496 106 ntBASIC4.06□□□□□ -1.76
CNTN3Q9P232 Y_RNA.238-201ENST00000364441 102 ntBASIC4.06□□□□□ -1.76
CNTN3Q9P232 Y_RNA.343-201ENST00000365354 112 ntBASIC4.06□□□□□ -1.76
CNTN3Q9P232 SNORA5A-201ENST00000384111 134 ntBASIC4.06□□□□□ -1.76
CNTN3Q9P232 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CNTN3Q9P232 RPS15AP5-201ENST00000436276 388 ntBASIC4.06□□□□□ -1.76
CNTN3Q9P232 AL049830.2-201ENST00000480072 201 ntBASIC4.06□□□□□ -1.76
CNTN3Q9P232 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.06□□□□□ -1.76
CNTN3Q9P232 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.06□□□□□ -1.76
CNTN3Q9P232 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.06□□□□□ -1.76
CNTN3Q9P232 RNA5SP143-201ENST00000516936 115 ntBASIC4.06□□□□□ -1.76
CNTN3Q9P232 SUMO2P18-201ENST00000518873 252 ntBASIC4.06□□□□□ -1.76
CNTN3Q9P232 AP000867.2-201ENST00000532468 320 ntBASIC4.06□□□□□ -1.76
CNTN3Q9P232 AC091152.3-201ENST00000604227 325 ntBASIC4.06□□□□□ -1.76
CNTN3Q9P232 AL034555.1-201ENST00000604816 211 ntBASIC4.06□□□□□ -1.76
CNTN3Q9P232 AL034408.1-202ENST00000636088 415 ntBASIC4.06□□□□□ -1.76
CNTN3Q9P232 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.06□□□□□ -1.76
CNTN3Q9P232 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CNTN3Q9P232 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.05□□□□□ -1.76
CNTN3Q9P232 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
CNTN3Q9P232 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.05□□□□□ -1.76
CNTN3Q9P232 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CNTN3Q9P232 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CNTN3Q9P232 RNU6-1010P-201ENST00000362757 107 ntBASIC4.05□□□□□ -1.76
CNTN3Q9P232 RNU6-727P-201ENST00000363592 107 ntBASIC4.05□□□□□ -1.76
CNTN3Q9P232 RNU6-449P-201ENST00000383914 107 ntBASIC4.05□□□□□ -1.76
CNTN3Q9P232 MIR23B-201ENST00000384832 97 ntBASIC4.05□□□□□ -1.76
CNTN3Q9P232 GOT2P5-201ENST00000433995 546 ntBASIC4.05□□□□□ -1.76
CNTN3Q9P232 snoU13.14-201ENST00000459372 104 ntBASIC4.05□□□□□ -1.76
CNTN3Q9P232 RN7SL93P-201ENST00000463035 293 ntBASIC4.05□□□□□ -1.76
CNTN3Q9P232 AC103975.1-201ENST00000482506 483 ntBASIC4.05□□□□□ -1.76
CNTN3Q9P232 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.05□□□□□ -1.76
CNTN3Q9P232 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.05□□□□□ -1.76
CNTN3Q9P232 RNU2-12P-201ENST00000517216 168 ntBASIC4.05□□□□□ -1.76
CNTN3Q9P232 AC026403.1-201ENST00000518938 295 ntBASIC4.05□□□□□ -1.76
CNTN3Q9P232 SNORA51-201ENST00000606420 132 ntBASIC4.05□□□□□ -1.76
CNTN3Q9P232 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.05□□□□□ -1.76
CNTN3Q9P232 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CNTN3Q9P232 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.05□□□□□ -1.76
CNTN3Q9P232 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CNTN3Q9P232 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CNTN3Q9P232 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CNTN3Q9P232 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CNTN3Q9P232 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CNTN3Q9P232 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.04□□□□□ -1.76
CNTN3Q9P232 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CNTN3Q9P232 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.04□□□□□ -1.76
CNTN3Q9P232 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.04□□□□□ -1.76
CNTN3Q9P232 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CNTN3Q9P232 Y_RNA.75-201ENST00000362927 97 ntBASIC4.04□□□□□ -1.76
CNTN3Q9P232 Y_RNA.329-201ENST00000365209 107 ntBASIC4.04□□□□□ -1.76
CNTN3Q9P232 Y_RNA.357-201ENST00000365487 109 ntBASIC4.04□□□□□ -1.76
CNTN3Q9P232 SNORD116-18-201ENST00000383961 92 ntBASIC4.04□□□□□ -1.76
CNTN3Q9P232 MIR549A-201ENST00000385268 96 ntBASIC4.04□□□□□ -1.76
CNTN3Q9P232 MIR591-201ENST00000385290 95 ntBASIC4.04□□□□□ -1.76
CNTN3Q9P232 RNA5SP424-201ENST00000390988 115 ntBASIC4.04□□□□□ -1.76
CNTN3Q9P232 HMGN2P8-201ENST00000391458 268 ntBASIC4.04□□□□□ -1.76
CNTN3Q9P232 RNU5E-9P-201ENST00000411164 104 ntBASIC4.04□□□□□ -1.76
CNTN3Q9P232 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.04□□□□□ -1.76
CNTN3Q9P232 AL035423.1-201ENST00000420331 213 ntBASIC4.04□□□□□ -1.76
CNTN3Q9P232 AC010099.1-201ENST00000455434 375 ntBASIC4.04□□□□□ -1.76
CNTN3Q9P232 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.04□□□□□ -1.76
CNTN3Q9P232 RNU6-344P-201ENST00000516635 111 ntBASIC4.04□□□□□ -1.76
CNTN3Q9P232 MIR2114-201ENST00000516645 80 ntBASIC4.04□□□□□ -1.76
CNTN3Q9P232 AP002001.1-203ENST00000534002 267 ntBASIC4.04□□□□□ -1.76
CNTN3Q9P232 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.04□□□□□ -1.76
CNTN3Q9P232 RPS15AP11-201ENST00000594193 385 ntBASIC4.04□□□□□ -1.76
CNTN3Q9P232 AC244505.7-201ENST00000599675 272 ntBASIC4.04□□□□□ -1.76
CNTN3Q9P232 PCGEM1.1-201ENST00000613431 131 ntBASIC4.04□□□□□ -1.76
CNTN3Q9P232 AL078604.3-201ENST00000615580 211 ntBASIC4.04□□□□□ -1.76
CNTN3Q9P232 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 207.1 ms