Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 Y_RNA.670-201ENST00000516255 105 ntBASIC2.52□□□□□ -2.01
HCN3Q9P1Z3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.52□□□□□ -2.01
HCN3Q9P1Z3 CYP4A27P-201ENST00000567218 190 ntBASIC2.52□□□□□ -2.01
HCN3Q9P1Z3 AC011494.1-201ENST00000596454 237 ntBASIC2.52□□□□□ -2.01
HCN3Q9P1Z3 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.52□□□□□ -2.01
HCN3Q9P1Z3 AC113139.1-201ENST00000605049 239 ntBASIC2.52□□□□□ -2.01
HCN3Q9P1Z3 AC013412.1-201ENST00000610687 192 ntBASIC2.52□□□□□ -2.01
HCN3Q9P1Z3 MIR1302-1-201ENST00000637932 143 ntBASIC2.52□□□□□ -2.01
HCN3Q9P1Z3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
HCN3Q9P1Z3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HCN3Q9P1Z3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
HCN3Q9P1Z3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.52□□□□□ -2.01
HCN3Q9P1Z3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
HCN3Q9P1Z3 VTRNA1-1-201ENST00000363120 99 ntBASIC2.51□□□□□ -2.01
HCN3Q9P1Z3 Y_RNA.533-201ENST00000384596 114 ntBASIC2.51□□□□□ -2.01
HCN3Q9P1Z3 MIR95-201ENST00000385072 81 ntBASIC2.51□□□□□ -2.01
HCN3Q9P1Z3 MIR561-201ENST00000385216 97 ntBASIC2.51□□□□□ -2.01
HCN3Q9P1Z3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
HCN3Q9P1Z3 SNORA46.1-201ENST00000391069 153 ntBASIC2.51□□□□□ -2.01
HCN3Q9P1Z3 AL139095.1-201ENST00000404326 391 ntBASIC2.51□□□□□ -2.01
HCN3Q9P1Z3 EIF4EP2-201ENST00000422816 654 ntBASIC2.51□□□□□ -2.01
HCN3Q9P1Z3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.51□□□□□ -2.01
HCN3Q9P1Z3 AL109933.2-201ENST00000452651 260 ntBASIC2.51□□□□□ -2.01
HCN3Q9P1Z3 AC079354.2-201ENST00000453523 154 ntBASIC2.51□□□□□ -2.01
HCN3Q9P1Z3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.51□□□□□ -2.01
HCN3Q9P1Z3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.51□□□□□ -2.01
HCN3Q9P1Z3 RNU6-559P-201ENST00000516151 98 ntBASIC2.51□□□□□ -2.01
HCN3Q9P1Z3 RNU6-965P-201ENST00000516721 96 ntBASIC2.51□□□□□ -2.01
HCN3Q9P1Z3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.51□□□□□ -2.01
HCN3Q9P1Z3 AC016256.1-201ENST00000547971 354 ntBASIC2.51□□□□□ -2.01
HCN3Q9P1Z3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.51□□□□□ -2.01
HCN3Q9P1Z3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.51□□□□□ -2.01
HCN3Q9P1Z3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.51□□□□□ -2.01
HCN3Q9P1Z3 AL356575.1-201ENST00000603008 283 ntBASIC2.51□□□□□ -2.01
HCN3Q9P1Z3 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.51□□□□□ -2.01
HCN3Q9P1Z3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.51□□□□□ -2.01
HCN3Q9P1Z3 RNU6-867P-201ENST00000364956 107 ntBASIC2.5□□□□□ -2.01
HCN3Q9P1Z3 Y_RNA.384-201ENST00000383909 102 ntBASIC2.5□□□□□ -2.01
HCN3Q9P1Z3 RNU6-378P-201ENST00000384324 107 ntBASIC2.5□□□□□ -2.01
HCN3Q9P1Z3 Y_RNA.474-201ENST00000384341 102 ntBASIC2.5□□□□□ -2.01
HCN3Q9P1Z3 Y_RNA.529-201ENST00000384586 119 ntBASIC2.5□□□□□ -2.01
HCN3Q9P1Z3 RNU6-1093P-201ENST00000391194 107 ntBASIC2.5□□□□□ -2.01
HCN3Q9P1Z3 SNORA75.4-201ENST00000391278 119 ntBASIC2.5□□□□□ -2.01
HCN3Q9P1Z3 RNU6-174P-201ENST00000410406 106 ntBASIC2.5□□□□□ -2.01
HCN3Q9P1Z3 RNU2-32P-201ENST00000411193 191 ntBASIC2.5□□□□□ -2.01
HCN3Q9P1Z3 AC087477.1-201ENST00000465747 340 ntBASIC2.5□□□□□ -2.01
HCN3Q9P1Z3 RPL23AP75-201ENST00000491601 451 ntBASIC2.5□□□□□ -2.01
HCN3Q9P1Z3 AC005741.1-201ENST00000511094 432 ntBASIC2.5□□□□□ -2.01
HCN3Q9P1Z3 AC096725.1-201ENST00000514266 313 ntBASIC2.5□□□□□ -2.01
HCN3Q9P1Z3 SNORA48.11-201ENST00000517015 89 ntBASIC2.5□□□□□ -2.01
HCN3Q9P1Z3 RNU6-1213P-201ENST00000517075 94 ntBASIC2.5□□□□□ -2.01
HCN3Q9P1Z3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.5□□□□□ -2.01
HCN3Q9P1Z3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.5□□□□□ -2.01
HCN3Q9P1Z3 RPS3AP23-202ENST00000574601 686 ntBASIC2.5□□□□□ -2.01
HCN3Q9P1Z3 7SK.7-201ENST00000603504 247 ntBASIC2.5□□□□□ -2.01
HCN3Q9P1Z3 AP000654.2-201ENST00000605633 586 ntBASIC2.5□□□□□ -2.01
HCN3Q9P1Z3 AL132765.2-201ENST00000610812 351 ntBASIC2.5□□□□□ -2.01
HCN3Q9P1Z3 AC092608.2-201ENST00000624427 218 ntBASIC2.5□□□□□ -2.01
HCN3Q9P1Z3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
HCN3Q9P1Z3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
HCN3Q9P1Z3 KPNA2P1-201ENST00000458289 1591 ntBASIC2.49□□□□□ -2.01
HCN3Q9P1Z3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.49□□□□□ -2.01
HCN3Q9P1Z3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
HCN3Q9P1Z3 RNU6-1159P-201ENST00000362933 107 ntBASIC2.49□□□□□ -2.01
HCN3Q9P1Z3 Y_RNA.263-201ENST00000364659 114 ntBASIC2.49□□□□□ -2.01
HCN3Q9P1Z3 RNU6-596P-201ENST00000365395 98 ntBASIC2.49□□□□□ -2.01
HCN3Q9P1Z3 RNU6-546P-201ENST00000383991 107 ntBASIC2.49□□□□□ -2.01
HCN3Q9P1Z3 MIR592-201ENST00000384959 97 ntBASIC2.49□□□□□ -2.01
HCN3Q9P1Z3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
HCN3Q9P1Z3 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.49□□□□□ -2.01
HCN3Q9P1Z3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.49□□□□□ -2.01
HCN3Q9P1Z3 RPL23AP50-201ENST00000434149 455 ntBASIC2.49□□□□□ -2.01
HCN3Q9P1Z3 AC009238.1-201ENST00000442165 424 ntBASIC2.49□□□□□ -2.01
HCN3Q9P1Z3 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.49□□□□□ -2.01
HCN3Q9P1Z3 AC009237.6-201ENST00000446969 424 ntBASIC2.49□□□□□ -2.01
HCN3Q9P1Z3 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.49□□□□□ -2.01
HCN3Q9P1Z3 AC103975.1-201ENST00000482506 483 ntBASIC2.49□□□□□ -2.01
HCN3Q9P1Z3 SRIP1-201ENST00000489235 288 ntBASIC2.49□□□□□ -2.01
HCN3Q9P1Z3 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.49□□□□□ -2.01
HCN3Q9P1Z3 AF186996.7-201ENST00000492781 209 ntBASIC2.49□□□□□ -2.01
HCN3Q9P1Z3 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.49□□□□□ -2.01
HCN3Q9P1Z3 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.49□□□□□ -2.01
HCN3Q9P1Z3 SNORA31.15-201ENST00000516771 132 ntBASIC2.49□□□□□ -2.01
HCN3Q9P1Z3 AL158827.2-201ENST00000602494 330 ntBASIC2.49□□□□□ -2.01
HCN3Q9P1Z3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.49□□□□□ -2.01
HCN3Q9P1Z3 PCGEM1.1-201ENST00000613431 131 ntBASIC2.49□□□□□ -2.01
HCN3Q9P1Z3 AL691447.3-201ENST00000635020 330 ntBASIC2.49□□□□□ -2.01
HCN3Q9P1Z3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HCN3Q9P1Z3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
HCN3Q9P1Z3 AL136360.1-201ENST00000503377 1900 ntBASIC2.48□□□□□ -2.01
HCN3Q9P1Z3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
HCN3Q9P1Z3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HCN3Q9P1Z3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.48□□□□□ -2.01
HCN3Q9P1Z3 RNU5B-2P-201ENST00000363036 113 ntBASIC2.48□□□□□ -2.01
HCN3Q9P1Z3 U3.9-201ENST00000363823 204 ntBASIC2.48□□□□□ -2.01
HCN3Q9P1Z3 SNORA25.6-201ENST00000364121 118 ntBASIC2.48□□□□□ -2.01
HCN3Q9P1Z3 RNU6-743P-201ENST00000364151 106 ntBASIC2.48□□□□□ -2.01
HCN3Q9P1Z3 RNU1-91P-201ENST00000364746 163 ntBASIC2.48□□□□□ -2.01
HCN3Q9P1Z3 RNU5E-4P-201ENST00000364931 120 ntBASIC2.48□□□□□ -2.01
HCN3Q9P1Z3 RNU6-331P-201ENST00000384724 107 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms