Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 MIR4325-201ENST00000583049 90 ntBASIC3.93□□□□□ -1.78
LMCD1Q9NZU5 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.93□□□□□ -1.78
LMCD1Q9NZU5 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.93□□□□□ -1.78
LMCD1Q9NZU5 AC090132.2-201ENST00000615881 347 ntBASIC3.93□□□□□ -1.78
LMCD1Q9NZU5 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.93□□□□□ -1.78
LMCD1Q9NZU5 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.92□□□□□ -1.78
LMCD1Q9NZU5 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LMCD1Q9NZU5 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LMCD1Q9NZU5 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.92□□□□□ -1.78
LMCD1Q9NZU5 RNU6-653P-201ENST00000363074 106 ntBASIC3.92□□□□□ -1.78
LMCD1Q9NZU5 SNORD115-32-201ENST00000364079 82 ntBASIC3.92□□□□□ -1.78
LMCD1Q9NZU5 Y_RNA.309-201ENST00000365046 111 ntBASIC3.92□□□□□ -1.78
LMCD1Q9NZU5 Y_RNA.331-201ENST00000365267 102 ntBASIC3.92□□□□□ -1.78
LMCD1Q9NZU5 RNU6-1056P-201ENST00000383996 107 ntBASIC3.92□□□□□ -1.78
LMCD1Q9NZU5 Y_RNA.570-201ENST00000384750 101 ntBASIC3.92□□□□□ -1.78
LMCD1Q9NZU5 HLFP1-201ENST00000402375 499 ntBASIC3.92□□□□□ -1.78
LMCD1Q9NZU5 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.92□□□□□ -1.78
LMCD1Q9NZU5 NDUFB4P7-201ENST00000423198 363 ntBASIC3.92□□□□□ -1.78
LMCD1Q9NZU5 AC098614.2-201ENST00000426040 255 ntBASIC3.92□□□□□ -1.78
LMCD1Q9NZU5 AL356867.1-201ENST00000429623 299 ntBASIC3.92□□□□□ -1.78
LMCD1Q9NZU5 UQCRBP2-201ENST00000447827 297 ntBASIC3.92□□□□□ -1.78
LMCD1Q9NZU5 HMGB1P22-201ENST00000505315 124 ntBASIC3.92□□□□□ -1.78
LMCD1Q9NZU5 SNORA43.2-201ENST00000516652 128 ntBASIC3.92□□□□□ -1.78
LMCD1Q9NZU5 AC127455.1-201ENST00000565496 145 ntBASIC3.92□□□□□ -1.78
LMCD1Q9NZU5 MIR548X2-201ENST00000579776 100 ntBASIC3.92□□□□□ -1.78
LMCD1Q9NZU5 MIR3684-201ENST00000579779 74 ntBASIC3.92□□□□□ -1.78
LMCD1Q9NZU5 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.92□□□□□ -1.78
LMCD1Q9NZU5 AL137843.1-201ENST00000605078 385 ntBASIC3.92□□□□□ -1.78
LMCD1Q9NZU5 AL008718.3-201ENST00000610217 321 ntBASIC3.92□□□□□ -1.78
LMCD1Q9NZU5 XIST_intron.1-201ENST00000619444 68 ntBASIC3.92□□□□□ -1.78
LMCD1Q9NZU5 SCARNA4-202ENST00000625402 129 ntBASIC3.92□□□□□ -1.78
LMCD1Q9NZU5 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LMCD1Q9NZU5 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LMCD1Q9NZU5 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LMCD1Q9NZU5 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
LMCD1Q9NZU5 SNORA29-201ENST00000384183 140 ntBASIC3.91□□□□□ -1.78
LMCD1Q9NZU5 RNU6-281P-201ENST00000384212 103 ntBASIC3.91□□□□□ -1.78
LMCD1Q9NZU5 Y_RNA.563-201ENST00000384707 108 ntBASIC3.91□□□□□ -1.78
LMCD1Q9NZU5 Y_RNA.571-201ENST00000384753 98 ntBASIC3.91□□□□□ -1.78
LMCD1Q9NZU5 MIR10B-201ENST00000385011 110 ntBASIC3.91□□□□□ -1.78
LMCD1Q9NZU5 HMGN2P8-201ENST00000391458 268 ntBASIC3.91□□□□□ -1.78
LMCD1Q9NZU5 EI24P2-201ENST00000397776 1076 ntBASIC3.91□□□□□ -1.78
LMCD1Q9NZU5 AL357139.1-201ENST00000407792 426 ntBASIC3.91□□□□□ -1.78
LMCD1Q9NZU5 AL512844.2-201ENST00000433990 593 ntBASIC3.91□□□□□ -1.78
LMCD1Q9NZU5 SEPT7P4-201ENST00000437076 306 ntBASIC3.91□□□□□ -1.78
LMCD1Q9NZU5 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.91□□□□□ -1.78
LMCD1Q9NZU5 AC243964.1-201ENST00000441814 261 ntBASIC3.91□□□□□ -1.78
LMCD1Q9NZU5 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LMCD1Q9NZU5 SNRPGP7-201ENST00000469016 106 ntBASIC3.91□□□□□ -1.78
LMCD1Q9NZU5 RPL31P13-201ENST00000484151 370 ntBASIC3.91□□□□□ -1.78
LMCD1Q9NZU5 AC005840.1-201ENST00000498412 377 ntBASIC3.91□□□□□ -1.78
LMCD1Q9NZU5 RNA5SP291-201ENST00000517222 105 ntBASIC3.91□□□□□ -1.78
LMCD1Q9NZU5 AL391261.3-201ENST00000557194 520 ntBASIC3.91□□□□□ -1.78
LMCD1Q9NZU5 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.91□□□□□ -1.78
LMCD1Q9NZU5 MIR3921-201ENST00000577308 85 ntBASIC3.91□□□□□ -1.78
LMCD1Q9NZU5 MIR5692C2-201ENST00000577959 77 ntBASIC3.91□□□□□ -1.78
LMCD1Q9NZU5 AC020895.1-201ENST00000595362 272 ntBASIC3.91□□□□□ -1.78
LMCD1Q9NZU5 AC027309.3-201ENST00000623419 351 ntBASIC3.91□□□□□ -1.78
LMCD1Q9NZU5 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.91□□□□□ -1.78
LMCD1Q9NZU5 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.91□□□□□ -1.78
LMCD1Q9NZU5 AC118273.1-201ENST00000525324 3006 ntBASIC3.9□□□□□ -1.78
LMCD1Q9NZU5 RNU6-312P-201ENST00000364629 107 ntBASIC3.9□□□□□ -1.79
LMCD1Q9NZU5 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.9□□□□□ -1.79
LMCD1Q9NZU5 SNORA46.1-201ENST00000391069 153 ntBASIC3.9□□□□□ -1.79
LMCD1Q9NZU5 RNA5SP31-201ENST00000411144 127 ntBASIC3.9□□□□□ -1.79
LMCD1Q9NZU5 TOMM22P1-201ENST00000418578 312 ntBASIC3.9□□□□□ -1.79
LMCD1Q9NZU5 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.9□□□□□ -1.79
LMCD1Q9NZU5 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.9□□□□□ -1.79
LMCD1Q9NZU5 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.9□□□□□ -1.79
LMCD1Q9NZU5 AC023141.12-201ENST00000512399 199 ntBASIC3.9□□□□□ -1.79
LMCD1Q9NZU5 AP005660.1-201ENST00000522972 293 ntBASIC3.9□□□□□ -1.79
LMCD1Q9NZU5 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.9□□□□□ -1.79
LMCD1Q9NZU5 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.9□□□□□ -1.79
LMCD1Q9NZU5 GNRHR2P1-201ENST00000555315 631 ntBASIC3.9□□□□□ -1.79
LMCD1Q9NZU5 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.9□□□□□ -1.79
LMCD1Q9NZU5 AL137849.1-201ENST00000604767 169 ntBASIC3.9□□□□□ -1.79
LMCD1Q9NZU5 AP002826.1-201ENST00000608835 315 ntBASIC3.9□□□□□ -1.79
LMCD1Q9NZU5 RMST_8.1-201ENST00000610287 165 ntBASIC3.9□□□□□ -1.79
LMCD1Q9NZU5 TUG1_4.1-201ENST00000619464 181 ntBASIC3.9□□□□□ -1.79
LMCD1Q9NZU5 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.9□□□□□ -1.79
LMCD1Q9NZU5 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.9□□□□□ -1.79
LMCD1Q9NZU5 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
LMCD1Q9NZU5 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
LMCD1Q9NZU5 AL133383.2-201ENST00000622958 2336 ntBASIC3.9□□□□□ -1.79
LMCD1Q9NZU5 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LMCD1Q9NZU5 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LMCD1Q9NZU5 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LMCD1Q9NZU5 AL353743.1-202ENST00000431724 1695 ntBASIC3.9□□□□□ -1.79
LMCD1Q9NZU5 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LMCD1Q9NZU5 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
LMCD1Q9NZU5 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
LMCD1Q9NZU5 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.9□□□□□ -1.79
LMCD1Q9NZU5 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
LMCD1Q9NZU5 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.89□□□□□ -1.79
LMCD1Q9NZU5 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LMCD1Q9NZU5 Y_RNA.23-201ENST00000362496 106 ntBASIC3.89□□□□□ -1.79
LMCD1Q9NZU5 Y_RNA.262-201ENST00000364641 102 ntBASIC3.89□□□□□ -1.79
LMCD1Q9NZU5 RNU4-56P-201ENST00000364700 142 ntBASIC3.89□□□□□ -1.79
LMCD1Q9NZU5 Y_RNA.319-201ENST00000365138 92 ntBASIC3.89□□□□□ -1.79
LMCD1Q9NZU5 RNA5SP167-201ENST00000365461 116 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 160.2 ms