Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.47□□□□□ -2.17
KLHL28Q9NXS3 RNU2-9P-201ENST00000410194 145 ntBASIC1.47□□□□□ -2.17
KLHL28Q9NXS3 AL117339.3-201ENST00000418733 162 ntBASIC1.47□□□□□ -2.17
KLHL28Q9NXS3 AC078809.1-201ENST00000427601 140 ntBASIC1.47□□□□□ -2.17
KLHL28Q9NXS3 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.47□□□□□ -2.17
KLHL28Q9NXS3 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.47□□□□□ -2.17
KLHL28Q9NXS3 PRPS1P1-201ENST00000445305 876 ntBASIC1.47□□□□□ -2.17
KLHL28Q9NXS3 AC132479.1-201ENST00000449160 144 ntBASIC1.47□□□□□ -2.17
KLHL28Q9NXS3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.47□□□□□ -2.17
KLHL28Q9NXS3 AC022364.2-201ENST00000457963 554 ntBASIC1.47□□□□□ -2.17
KLHL28Q9NXS3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.47□□□□□ -2.17
KLHL28Q9NXS3 AC079382.1-201ENST00000493346 557 ntBASIC1.47□□□□□ -2.17
KLHL28Q9NXS3 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.47□□□□□ -2.17
KLHL28Q9NXS3 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.47□□□□□ -2.17
KLHL28Q9NXS3 RNU2-69P-201ENST00000516061 100 ntBASIC1.47□□□□□ -2.17
KLHL28Q9NXS3 SNORA25.17-201ENST00000517184 124 ntBASIC1.47□□□□□ -2.17
KLHL28Q9NXS3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.47□□□□□ -2.17
KLHL28Q9NXS3 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.47□□□□□ -2.17
KLHL28Q9NXS3 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.47□□□□□ -2.17
KLHL28Q9NXS3 MIR4255-201ENST00000579351 72 ntBASIC1.47□□□□□ -2.17
KLHL28Q9NXS3 AC107304.1-201ENST00000604229 296 ntBASIC1.47□□□□□ -2.17
KLHL28Q9NXS3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.47□□□□□ -2.17
KLHL28Q9NXS3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.47□□□□□ -2.17
KLHL28Q9NXS3 Y_RNA.159-201ENST00000363674 87 ntBASIC1.46□□□□□ -2.18
KLHL28Q9NXS3 RNU4-56P-201ENST00000364700 142 ntBASIC1.46□□□□□ -2.18
KLHL28Q9NXS3 RNU6-439P-201ENST00000384188 106 ntBASIC1.46□□□□□ -2.18
KLHL28Q9NXS3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.46□□□□□ -2.18
KLHL28Q9NXS3 SNORD70.1-201ENST00000391007 85 ntBASIC1.46□□□□□ -2.18
KLHL28Q9NXS3 SNORA26.3-201ENST00000391119 136 ntBASIC1.46□□□□□ -2.18
KLHL28Q9NXS3 AC068050.1-201ENST00000394891 380 ntBASIC1.46□□□□□ -2.18
KLHL28Q9NXS3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.46□□□□□ -2.18
KLHL28Q9NXS3 RNA5SP201-201ENST00000410316 124 ntBASIC1.46□□□□□ -2.18
KLHL28Q9NXS3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.46□□□□□ -2.18
KLHL28Q9NXS3 MTCO3P46-201ENST00000425787 232 ntBASIC1.46□□□□□ -2.18
KLHL28Q9NXS3 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.46□□□□□ -2.18
KLHL28Q9NXS3 SNAP23P1-201ENST00000433229 246 ntBASIC1.46□□□□□ -2.18
KLHL28Q9NXS3 MTND1P18-201ENST00000448191 573 ntBASIC1.46□□□□□ -2.18
KLHL28Q9NXS3 RNU6-956P-201ENST00000458868 103 ntBASIC1.46□□□□□ -2.18
KLHL28Q9NXS3 snoU13.9-201ENST00000458927 103 ntBASIC1.46□□□□□ -2.18
KLHL28Q9NXS3 GMFBP1-201ENST00000467831 427 ntBASIC1.46□□□□□ -2.18
KLHL28Q9NXS3 AC114801.2-201ENST00000503825 781 ntBASIC1.46□□□□□ -2.18
KLHL28Q9NXS3 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.46□□□□□ -2.18
KLHL28Q9NXS3 AC079140.5-201ENST00000507882 310 ntBASIC1.46□□□□□ -2.18
KLHL28Q9NXS3 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.46□□□□□ -2.18
KLHL28Q9NXS3 Y_RNA.675-201ENST00000516389 149 ntBASIC1.46□□□□□ -2.18
KLHL28Q9NXS3 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.46□□□□□ -2.18
KLHL28Q9NXS3 SUB1P2-201ENST00000556401 297 ntBASIC1.46□□□□□ -2.18
KLHL28Q9NXS3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.46□□□□□ -2.18
KLHL28Q9NXS3 MIR3923-201ENST00000579521 83 ntBASIC1.46□□□□□ -2.18
KLHL28Q9NXS3 AP005136.1-201ENST00000579765 429 ntBASIC1.46□□□□□ -2.18
KLHL28Q9NXS3 AC012507.3-201ENST00000603556 477 ntBASIC1.46□□□□□ -2.18
KLHL28Q9NXS3 BX248123.2-201ENST00000606318 124 ntBASIC1.46□□□□□ -2.18
KLHL28Q9NXS3 snoU13.31-201ENST00000607291 104 ntBASIC1.46□□□□□ -2.18
KLHL28Q9NXS3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
KLHL28Q9NXS3 AC009161.2-201ENST00000624626 138 ntBASIC1.46□□□□□ -2.18
KLHL28Q9NXS3 AL390237.1-201ENST00000404226 1415 ntBASIC1.46□□□□□ -2.18
KLHL28Q9NXS3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
KLHL28Q9NXS3 MTND5P9-201ENST00000503854 1755 ntBASIC1.45□□□□□ -2.18
KLHL28Q9NXS3 MIR340-201ENST00000362125 95 ntBASIC1.45□□□□□ -2.18
KLHL28Q9NXS3 Y_RNA.359-201ENST00000365498 102 ntBASIC1.45□□□□□ -2.18
KLHL28Q9NXS3 RNU6-1127P-201ENST00000384580 107 ntBASIC1.45□□□□□ -2.18
KLHL28Q9NXS3 Y_RNA.553-201ENST00000384670 102 ntBASIC1.45□□□□□ -2.18
KLHL28Q9NXS3 SNORA16.2-201ENST00000390991 127 ntBASIC1.45□□□□□ -2.18
KLHL28Q9NXS3 SNORA67.5-201ENST00000391036 107 ntBASIC1.45□□□□□ -2.18
KLHL28Q9NXS3 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.45□□□□□ -2.18
KLHL28Q9NXS3 MTCO2P16-201ENST00000436962 677 ntBASIC1.45□□□□□ -2.18
KLHL28Q9NXS3 AL357134.1-201ENST00000445848 426 ntBASIC1.45□□□□□ -2.18
KLHL28Q9NXS3 AC098826.2-201ENST00000452011 651 ntBASIC1.45□□□□□ -2.18
KLHL28Q9NXS3 Y_RNA.688-201ENST00000516565 95 ntBASIC1.45□□□□□ -2.18
KLHL28Q9NXS3 MTCO2P4-201ENST00000517968 247 ntBASIC1.45□□□□□ -2.18
KLHL28Q9NXS3 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.45□□□□□ -2.18
KLHL28Q9NXS3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.45□□□□□ -2.18
KLHL28Q9NXS3 AP002963.1-201ENST00000530590 184 ntBASIC1.45□□□□□ -2.18
KLHL28Q9NXS3 HSPE1P4-201ENST00000550617 308 ntBASIC1.45□□□□□ -2.18
KLHL28Q9NXS3 MTCO3P23-201ENST00000561363 289 ntBASIC1.45□□□□□ -2.18
KLHL28Q9NXS3 AC109446.1-201ENST00000566172 220 ntBASIC1.45□□□□□ -2.18
KLHL28Q9NXS3 AC006362.1-201ENST00000567392 174 ntBASIC1.45□□□□□ -2.18
KLHL28Q9NXS3 AL391840.1-201ENST00000571144 367 ntBASIC1.45□□□□□ -2.18
KLHL28Q9NXS3 RSL24D1P11-201ENST00000591045 491 ntBASIC1.45□□□□□ -2.18
KLHL28Q9NXS3 AC072046.2-201ENST00000618366 268 ntBASIC1.45□□□□□ -2.18
KLHL28Q9NXS3 AC009509.4-201ENST00000619202 509 ntBASIC1.45□□□□□ -2.18
KLHL28Q9NXS3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
KLHL28Q9NXS3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
KLHL28Q9NXS3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
KLHL28Q9NXS3 AC092268.1-201ENST00000342691 405 ntBASIC1.44□□□□□ -2.18
KLHL28Q9NXS3 RNU6-112P-201ENST00000363599 104 ntBASIC1.44□□□□□ -2.18
KLHL28Q9NXS3 Y_RNA.381-201ENST00000365666 102 ntBASIC1.44□□□□□ -2.18
KLHL28Q9NXS3 RNY3P9-201ENST00000384727 106 ntBASIC1.44□□□□□ -2.18
KLHL28Q9NXS3 RN7SKP51-201ENST00000410781 304 ntBASIC1.44□□□□□ -2.18
KLHL28Q9NXS3 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.44□□□□□ -2.18
KLHL28Q9NXS3 MTCO3P41-201ENST00000414801 328 ntBASIC1.44□□□□□ -2.18
KLHL28Q9NXS3 RPL23AP95-201ENST00000426806 265 ntBASIC1.44□□□□□ -2.18
KLHL28Q9NXS3 AL133396.1-201ENST00000432048 687 ntBASIC1.44□□□□□ -2.18
KLHL28Q9NXS3 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.44□□□□□ -2.18
KLHL28Q9NXS3 AC087477.1-201ENST00000465747 340 ntBASIC1.44□□□□□ -2.18
KLHL28Q9NXS3 AC005908.1-201ENST00000468701 347 ntBASIC1.44□□□□□ -2.18
KLHL28Q9NXS3 AC010424.1-201ENST00000506336 297 ntBASIC1.44□□□□□ -2.18
KLHL28Q9NXS3 ATP5EP1-201ENST00000510257 156 ntBASIC1.44□□□□□ -2.18
KLHL28Q9NXS3 AC025465.3-201ENST00000510570 311 ntBASIC1.44□□□□□ -2.18
KLHL28Q9NXS3 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 159.1 ms