Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AC008269.2-201ENST00000561915 1105 ntBASIC1.21□□□□□ -2.22
CLN6Q9NWW5 AP005136.1-201ENST00000579765 429 ntBASIC1.21□□□□□ -2.22
CLN6Q9NWW5 AP001836.1-201ENST00000604675 523 ntBASIC1.21□□□□□ -2.22
CLN6Q9NWW5 AC091304.6-201ENST00000619761 202 ntBASIC1.21□□□□□ -2.22
CLN6Q9NWW5 ICE2P2-201ENST00000483823 2787 ntBASIC1.21□□□□□ -2.22
CLN6Q9NWW5 AC100821.1-201ENST00000523153 2479 ntBASIC1.21□□□□□ -2.22
CLN6Q9NWW5 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CLN6Q9NWW5 MIR26B-201ENST00000362251 77 ntBASIC1.2□□□□□ -2.22
CLN6Q9NWW5 RNU6-360P-201ENST00000390944 104 ntBASIC1.2□□□□□ -2.22
CLN6Q9NWW5 RPL17P50-201ENST00000396131 546 ntBASIC1.2□□□□□ -2.22
CLN6Q9NWW5 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.2□□□□□ -2.22
CLN6Q9NWW5 RNU2-29P-201ENST00000410423 189 ntBASIC1.2□□□□□ -2.22
CLN6Q9NWW5 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.2□□□□□ -2.22
CLN6Q9NWW5 CYCSP49-201ENST00000420810 319 ntBASIC1.2□□□□□ -2.22
CLN6Q9NWW5 PIGFP2-201ENST00000421400 651 ntBASIC1.2□□□□□ -2.22
CLN6Q9NWW5 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.2□□□□□ -2.22
CLN6Q9NWW5 FTH1P12-201ENST00000432137 551 ntBASIC1.2□□□□□ -2.22
CLN6Q9NWW5 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.2□□□□□ -2.22
CLN6Q9NWW5 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.2□□□□□ -2.22
CLN6Q9NWW5 AC007395.1-201ENST00000451333 677 ntBASIC1.2□□□□□ -2.22
CLN6Q9NWW5 AC016925.1-201ENST00000458303 298 ntBASIC1.2□□□□□ -2.22
CLN6Q9NWW5 AC007547.1-201ENST00000462177 490 ntBASIC1.2□□□□□ -2.22
CLN6Q9NWW5 RPS26P55-201ENST00000471178 356 ntBASIC1.2□□□□□ -2.22
CLN6Q9NWW5 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.2□□□□□ -2.22
CLN6Q9NWW5 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.2□□□□□ -2.22
CLN6Q9NWW5 AC098862.1-201ENST00000504991 413 ntBASIC1.2□□□□□ -2.22
CLN6Q9NWW5 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.2□□□□□ -2.22
CLN6Q9NWW5 AC116337.1-201ENST00000509680 687 ntBASIC1.2□□□□□ -2.22
CLN6Q9NWW5 RN7SKP179-201ENST00000516126 217 ntBASIC1.2□□□□□ -2.22
CLN6Q9NWW5 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.2□□□□□ -2.22
CLN6Q9NWW5 AC060788.1-201ENST00000521318 469 ntBASIC1.2□□□□□ -2.22
CLN6Q9NWW5 MTCO3P23-201ENST00000561363 289 ntBASIC1.2□□□□□ -2.22
CLN6Q9NWW5 AC068338.1-201ENST00000565567 176 ntBASIC1.2□□□□□ -2.22
CLN6Q9NWW5 MIR3941-201ENST00000582572 103 ntBASIC1.2□□□□□ -2.22
CLN6Q9NWW5 RPL17P51-201ENST00000605218 238 ntBASIC1.2□□□□□ -2.22
CLN6Q9NWW5 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.2□□□□□ -2.22
CLN6Q9NWW5 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.2□□□□□ -2.22
CLN6Q9NWW5 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.2□□□□□ -2.22
CLN6Q9NWW5 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
CLN6Q9NWW5 AL391262.2-201ENST00000622466 494 ntBASIC1.2□□□□□ -2.22
CLN6Q9NWW5 AL450472.1-202ENST00000637286 180 ntBASIC1.2□□□□□ -2.22
CLN6Q9NWW5 ZNF72P-201ENST00000425869 1908 ntBASIC1.2□□□□□ -2.22
CLN6Q9NWW5 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CLN6Q9NWW5 AC010615.1-201ENST00000594254 1764 ntBASIC1.19□□□□□ -2.22
CLN6Q9NWW5 RNU6-862P-201ENST00000362804 105 ntBASIC1.19□□□□□ -2.22
CLN6Q9NWW5 SNORA36A-201ENST00000384221 132 ntBASIC1.19□□□□□ -2.22
CLN6Q9NWW5 SNORA26.8-201ENST00000391306 124 ntBASIC1.19□□□□□ -2.22
CLN6Q9NWW5 RNU6-248P-201ENST00000410720 107 ntBASIC1.19□□□□□ -2.22
CLN6Q9NWW5 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.19□□□□□ -2.22
CLN6Q9NWW5 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.19□□□□□ -2.22
CLN6Q9NWW5 C8orf59P1-201ENST00000429930 303 ntBASIC1.19□□□□□ -2.22
CLN6Q9NWW5 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.19□□□□□ -2.22
CLN6Q9NWW5 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.19□□□□□ -2.22
CLN6Q9NWW5 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.19□□□□□ -2.22
CLN6Q9NWW5 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.19□□□□□ -2.22
CLN6Q9NWW5 SNRPFP3-201ENST00000457792 225 ntBASIC1.19□□□□□ -2.22
CLN6Q9NWW5 snoU13.30-201ENST00000458951 104 ntBASIC1.19□□□□□ -2.22
CLN6Q9NWW5 AC010531.2-201ENST00000465012 153 ntBASIC1.19□□□□□ -2.22
CLN6Q9NWW5 AL163973.1-201ENST00000484753 577 ntBASIC1.19□□□□□ -2.22
CLN6Q9NWW5 RPS23P5-201ENST00000495419 428 ntBASIC1.19□□□□□ -2.22
CLN6Q9NWW5 AC008628.2-201ENST00000502605 298 ntBASIC1.19□□□□□ -2.22
CLN6Q9NWW5 RNA5SP437-201ENST00000517249 129 ntBASIC1.19□□□□□ -2.22
CLN6Q9NWW5 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.19□□□□□ -2.22
CLN6Q9NWW5 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.19□□□□□ -2.22
CLN6Q9NWW5 RNU6-85P-201ENST00000605989 107 ntBASIC1.19□□□□□ -2.22
CLN6Q9NWW5 AC008536.2-201ENST00000607284 349 ntBASIC1.19□□□□□ -2.22
CLN6Q9NWW5 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.19□□□□□ -2.22
CLN6Q9NWW5 AL121890.5-201ENST00000620848 304 ntBASIC1.19□□□□□ -2.22
CLN6Q9NWW5 AL136221.1-201ENST00000621449 509 ntBASIC1.19□□□□□ -2.22
CLN6Q9NWW5 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CLN6Q9NWW5 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.18□□□□□ -2.22
CLN6Q9NWW5 AL390237.1-201ENST00000404226 1415 ntBASIC1.18□□□□□ -2.22
CLN6Q9NWW5 RNU1-76P-201ENST00000362903 159 ntBASIC1.18□□□□□ -2.22
CLN6Q9NWW5 Y_RNA.132-201ENST00000363421 102 ntBASIC1.18□□□□□ -2.22
CLN6Q9NWW5 RNU4-91P-201ENST00000364778 135 ntBASIC1.18□□□□□ -2.22
CLN6Q9NWW5 SNORD1A-201ENST00000364968 72 ntBASIC1.18□□□□□ -2.22
CLN6Q9NWW5 Y_RNA.399-201ENST00000383955 105 ntBASIC1.18□□□□□ -2.22
CLN6Q9NWW5 SNORA67.5-201ENST00000391036 107 ntBASIC1.18□□□□□ -2.22
CLN6Q9NWW5 MTND2P18-201ENST00000419962 1030 ntBASIC1.18□□□□□ -2.22
CLN6Q9NWW5 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.18□□□□□ -2.22
CLN6Q9NWW5 AC099677.2-201ENST00000436385 175 ntBASIC1.18□□□□□ -2.22
CLN6Q9NWW5 RNU7-167P-201ENST00000459160 62 ntBASIC1.18□□□□□ -2.22
CLN6Q9NWW5 SNORD13-201ENST00000459299 104 ntBASIC1.18□□□□□ -2.22
CLN6Q9NWW5 AC079140.3-201ENST00000511111 550 ntBASIC1.18□□□□□ -2.22
CLN6Q9NWW5 SUB1P2-201ENST00000556401 297 ntBASIC1.18□□□□□ -2.22
CLN6Q9NWW5 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.18□□□□□ -2.22
CLN6Q9NWW5 SNORA59B-202ENST00000578183 701 ntBASIC1.18□□□□□ -2.22
CLN6Q9NWW5 AL645939.4-201ENST00000604495 135 ntBASIC1.18□□□□□ -2.22
CLN6Q9NWW5 AC009994.1-201ENST00000606889 253 ntBASIC1.18□□□□□ -2.22
CLN6Q9NWW5 AC064807.4-201ENST00000607201 407 ntBASIC1.18□□□□□ -2.22
CLN6Q9NWW5 U2.17-201ENST00000611454 95 ntBASIC1.18□□□□□ -2.22
CLN6Q9NWW5 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.18□□□□□ -2.22
CLN6Q9NWW5 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.18□□□□□ -2.22
CLN6Q9NWW5 MIR302D-201ENST00000362275 68 ntBASIC1.17□□□□□ -2.22
CLN6Q9NWW5 RNU1-96P-201ENST00000364163 162 ntBASIC1.17□□□□□ -2.22
CLN6Q9NWW5 RNU6-1019P-201ENST00000364424 107 ntBASIC1.17□□□□□ -2.22
CLN6Q9NWW5 Y_RNA.255-201ENST00000364581 97 ntBASIC1.17□□□□□ -2.22
CLN6Q9NWW5 RNA5SP126-201ENST00000365092 109 ntBASIC1.17□□□□□ -2.22
CLN6Q9NWW5 MIR548B-201ENST00000385247 97 ntBASIC1.17□□□□□ -2.22
CLN6Q9NWW5 RNU6-1106P-201ENST00000390845 107 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms