Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 RNU6-1329P-201ENST00000365664 107 ntBASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 RNU6-831P-201ENST00000384548 107 ntBASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 RNU2-2P-201ENST00000410396 191 ntBASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 RNU2-32P-201ENST00000411193 191 ntBASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 MTND1P2-201ENST00000430604 821 ntBASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 AC007547.1-201ENST00000462177 490 ntBASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 RPS29P21-201ENST00000496272 170 ntBASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 AC008628.2-201ENST00000502605 298 ntBASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 AC016632.1-201ENST00000503994 196 ntBASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 RNU6-358P-201ENST00000516564 75 ntBASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 RNU6-1314P-201ENST00000517139 104 ntBASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 AC107953.1-201ENST00000522216 297 ntBASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 AC100830.2-201ENST00000581636 240 ntBASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 MIR3672-201ENST00000584290 82 ntBASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 AC002984.1-201ENST00000591692 448 ntBASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 SNRPGP17-201ENST00000603780 214 ntBASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 U2.15-201ENST00000611544 191 ntBASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 U2.16-201ENST00000613119 191 ntBASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 U2.12-201ENST00000613778 191 ntBASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 U2.20-201ENST00000613956 192 ntBASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 U2.9-201ENST00000615427 191 ntBASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 U2.11-201ENST00000616345 191 ntBASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 U2.2-201ENST00000616535 191 ntBASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 AL132822.1-201ENST00000617063 513 ntBASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 U2.3-201ENST00000617785 191 ntBASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 U2.19-201ENST00000618602 191 ntBASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 RNU2-1-201ENST00000618664 191 ntBASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 U2.6-201ENST00000619225 191 ntBASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 U2.5-201ENST00000619465 191 ntBASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 U2.10-201ENST00000620268 191 ntBASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 AC006504.8-201ENST00000621046 635 ntBASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 AL136221.1-201ENST00000621449 509 ntBASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.58□□□□□ -2
SMC4Q9NTJ3 SNORA32.2-201ENST00000384049 122 ntBASIC2.58□□□□□ -2
SMC4Q9NTJ3 RNU6-611P-201ENST00000384276 104 ntBASIC2.58□□□□□ -2
SMC4Q9NTJ3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.58□□□□□ -2
SMC4Q9NTJ3 RNA5SP338-201ENST00000410495 85 ntBASIC2.58□□□□□ -2
SMC4Q9NTJ3 RNU6-373P-201ENST00000411247 98 ntBASIC2.58□□□□□ -2
SMC4Q9NTJ3 VN1R36P-201ENST00000414936 291 ntBASIC2.58□□□□□ -2
SMC4Q9NTJ3 AL590632.1-201ENST00000424289 371 ntBASIC2.58□□□□□ -2
SMC4Q9NTJ3 AL445646.1-201ENST00000431784 216 ntBASIC2.58□□□□□ -2
SMC4Q9NTJ3 NDUFA5P4-201ENST00000436704 385 ntBASIC2.58□□□□□ -2
SMC4Q9NTJ3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.58□□□□□ -2
SMC4Q9NTJ3 MTCO3P18-201ENST00000440206 761 ntBASIC2.58□□□□□ -2
SMC4Q9NTJ3 RBMX2P4-201ENST00000441256 376 ntBASIC2.58□□□□□ -2
SMC4Q9NTJ3 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.58□□□□□ -2
SMC4Q9NTJ3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.58□□□□□ -2
SMC4Q9NTJ3 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.58□□□□□ -2
SMC4Q9NTJ3 SNORA4.4-201ENST00000515921 135 ntBASIC2.58□□□□□ -2
SMC4Q9NTJ3 SNORA31.25-201ENST00000517242 134 ntBASIC2.58□□□□□ -2
SMC4Q9NTJ3 AF235103.2-201ENST00000525753 346 ntBASIC2.58□□□□□ -2
SMC4Q9NTJ3 HSPE1P4-201ENST00000550617 308 ntBASIC2.58□□□□□ -2
SMC4Q9NTJ3 AC026271.5-201ENST00000577873 130 ntBASIC2.58□□□□□ -2
SMC4Q9NTJ3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SMC4Q9NTJ3 AP006437.1-201ENST00000641440 3685 ntBASIC2.58□□□□□ -2
SMC4Q9NTJ3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
SMC4Q9NTJ3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
SMC4Q9NTJ3 RNU4-56P-201ENST00000364700 142 ntBASIC2.57□□□□□ -2
SMC4Q9NTJ3 RNU6-1283P-201ENST00000365314 105 ntBASIC2.57□□□□□ -2
SMC4Q9NTJ3 AL355497.1-201ENST00000406262 551 ntBASIC2.57□□□□□ -2
SMC4Q9NTJ3 SNORD23.1-201ENST00000408212 104 ntBASIC2.57□□□□□ -2
SMC4Q9NTJ3 IFNA20P-201ENST00000436840 528 ntBASIC2.57□□□□□ -2
SMC4Q9NTJ3 AMD1P1-201ENST00000457220 922 ntBASIC2.57□□□□□ -2
SMC4Q9NTJ3 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.57□□□□□ -2
SMC4Q9NTJ3 AC091874.1-201ENST00000511402 339 ntBASIC2.57□□□□□ -2
SMC4Q9NTJ3 RNU7-193P-201ENST00000516723 65 ntBASIC2.57□□□□□ -2
SMC4Q9NTJ3 RNU6-1088P-201ENST00000516850 104 ntBASIC2.57□□□□□ -2
SMC4Q9NTJ3 RNU6-667P-201ENST00000517186 102 ntBASIC2.57□□□□□ -2
SMC4Q9NTJ3 AC233702.2-202ENST00000562547 291 ntBASIC2.57□□□□□ -2
SMC4Q9NTJ3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.57□□□□□ -2
SMC4Q9NTJ3 MIR5089-201ENST00000580047 84 ntBASIC2.57□□□□□ -2
SMC4Q9NTJ3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.57□□□□□ -2
SMC4Q9NTJ3 SNRPGP19-201ENST00000603826 189 ntBASIC2.57□□□□□ -2
SMC4Q9NTJ3 AC012640.5-201ENST00000623897 319 ntBASIC2.57□□□□□ -2
SMC4Q9NTJ3 RNU4-15P-201ENST00000362613 141 ntBASIC2.56□□□□□ -2
SMC4Q9NTJ3 RNA5SP37-201ENST00000365420 130 ntBASIC2.56□□□□□ -2
SMC4Q9NTJ3 Y_RNA.390-201ENST00000383932 102 ntBASIC2.56□□□□□ -2
SMC4Q9NTJ3 Y_RNA.414-201ENST00000384011 101 ntBASIC2.56□□□□□ -2
SMC4Q9NTJ3 RNU6-214P-201ENST00000384130 107 ntBASIC2.56□□□□□ -2
SMC4Q9NTJ3 Y_RNA.530-201ENST00000384587 101 ntBASIC2.56□□□□□ -2
SMC4Q9NTJ3 SNORA40.19-201ENST00000390846 128 ntBASIC2.56□□□□□ -2
SMC4Q9NTJ3 U3.40-201ENST00000408706 208 ntBASIC2.56□□□□□ -2
SMC4Q9NTJ3 Y_RNA.597-201ENST00000410463 100 ntBASIC2.56□□□□□ -2
SMC4Q9NTJ3 UBE2V1P4-201ENST00000425374 344 ntBASIC2.56□□□□□ -2
SMC4Q9NTJ3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.56□□□□□ -2
SMC4Q9NTJ3 snoU13.15-201ENST00000459407 104 ntBASIC2.56□□□□□ -2
SMC4Q9NTJ3 SNRPGP7-201ENST00000469016 106 ntBASIC2.56□□□□□ -2
SMC4Q9NTJ3 TRBVA-201ENST00000498804 316 ntBASIC2.56□□□□□ -2
SMC4Q9NTJ3 MTCO2P30-201ENST00000503662 364 ntBASIC2.56□□□□□ -2
SMC4Q9NTJ3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.56□□□□□ -2
SMC4Q9NTJ3 MIR514B-201ENST00000516774 80 ntBASIC2.56□□□□□ -2
SMC4Q9NTJ3 RNU1-40P-201ENST00000516816 164 ntBASIC2.56□□□□□ -2
SMC4Q9NTJ3 RNU1-97P-201ENST00000516872 164 ntBASIC2.56□□□□□ -2
SMC4Q9NTJ3 RNU6-273P-201ENST00000516937 96 ntBASIC2.56□□□□□ -2
SMC4Q9NTJ3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.56□□□□□ -2
SMC4Q9NTJ3 AC016256.1-201ENST00000547971 354 ntBASIC2.56□□□□□ -2
SMC4Q9NTJ3 TRAV32-201ENST00000553993 340 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms