Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 SNORA22B-201ENST00000383876 138 ntBASIC2.96□□□□□ -1.94
VPS45Q9NRW7 RNU6-692P-201ENST00000384496 107 ntBASIC2.96□□□□□ -1.94
VPS45Q9NRW7 Y_RNA.533-201ENST00000384596 114 ntBASIC2.96□□□□□ -1.94
VPS45Q9NRW7 MIR196B-201ENST00000384852 84 ntBASIC2.96□□□□□ -1.94
VPS45Q9NRW7 RNU6-308P-201ENST00000390957 107 ntBASIC2.96□□□□□ -1.94
VPS45Q9NRW7 snosnR66.1-201ENST00000391095 99 ntBASIC2.96□□□□□ -1.94
VPS45Q9NRW7 CYCSP48-201ENST00000417124 323 ntBASIC2.96□□□□□ -1.94
VPS45Q9NRW7 AC007969.2-201ENST00000441891 191 ntBASIC2.96□□□□□ -1.94
VPS45Q9NRW7 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.96□□□□□ -1.94
VPS45Q9NRW7 UBL5P3-201ENST00000475112 231 ntBASIC2.96□□□□□ -1.94
VPS45Q9NRW7 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.96□□□□□ -1.94
VPS45Q9NRW7 AC023141.11-201ENST00000508864 202 ntBASIC2.96□□□□□ -1.94
VPS45Q9NRW7 RNU6-120P-201ENST00000516077 103 ntBASIC2.96□□□□□ -1.94
VPS45Q9NRW7 RN7SKP295-201ENST00000517264 153 ntBASIC2.96□□□□□ -1.94
VPS45Q9NRW7 AC023442.1-201ENST00000531247 422 ntBASIC2.96□□□□□ -1.94
VPS45Q9NRW7 AC105245.1-201ENST00000581934 244 ntBASIC2.96□□□□□ -1.94
VPS45Q9NRW7 AC006504.6-201ENST00000590142 199 ntBASIC2.96□□□□□ -1.94
VPS45Q9NRW7 AL356157.2-201ENST00000605122 111 ntBASIC2.96□□□□□ -1.94
VPS45Q9NRW7 AC005014.2-201ENST00000607795 599 ntBASIC2.96□□□□□ -1.94
VPS45Q9NRW7 AC009318.2-201ENST00000610917 651 ntBASIC2.96□□□□□ -1.94
VPS45Q9NRW7 PART1_1.1-201ENST00000611761 217 ntBASIC2.96□□□□□ -1.94
VPS45Q9NRW7 HMGB1P24-202ENST00000615653 685 ntBASIC2.96□□□□□ -1.94
VPS45Q9NRW7 AC002543.1-201ENST00000299783 1954 ntBASIC2.96□□□□□ -1.94
VPS45Q9NRW7 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
VPS45Q9NRW7 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VPS45Q9NRW7 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
VPS45Q9NRW7 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
VPS45Q9NRW7 RNY1P16-201ENST00000363063 111 ntBASIC2.95□□□□□ -1.94
VPS45Q9NRW7 Y_RNA.123-201ENST00000363338 102 ntBASIC2.95□□□□□ -1.94
VPS45Q9NRW7 RNU6-529P-201ENST00000363383 104 ntBASIC2.95□□□□□ -1.94
VPS45Q9NRW7 Y_RNA.428-201ENST00000384078 102 ntBASIC2.95□□□□□ -1.94
VPS45Q9NRW7 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
VPS45Q9NRW7 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS45Q9NRW7 AL353997.1-201ENST00000432936 108 ntBASIC2.95□□□□□ -1.94
VPS45Q9NRW7 AC099799.1-201ENST00000439809 192 ntBASIC2.95□□□□□ -1.94
VPS45Q9NRW7 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.95□□□□□ -1.94
VPS45Q9NRW7 snoU13.14-201ENST00000459372 104 ntBASIC2.95□□□□□ -1.94
VPS45Q9NRW7 AP001025.1-201ENST00000486139 332 ntBASIC2.95□□□□□ -1.94
VPS45Q9NRW7 Y_RNA.661-201ENST00000516003 99 ntBASIC2.95□□□□□ -1.94
VPS45Q9NRW7 SNORD116.3-201ENST00000517176 78 ntBASIC2.95□□□□□ -1.94
VPS45Q9NRW7 MIR3117-201ENST00000584034 78 ntBASIC2.95□□□□□ -1.94
VPS45Q9NRW7 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS45Q9NRW7 AC023043.3-201ENST00000593113 385 ntBASIC2.95□□□□□ -1.94
VPS45Q9NRW7 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.95□□□□□ -1.94
VPS45Q9NRW7 AL158827.2-201ENST00000602494 330 ntBASIC2.95□□□□□ -1.94
VPS45Q9NRW7 AC005034.5-201ENST00000604219 466 ntBASIC2.95□□□□□ -1.94
VPS45Q9NRW7 AC016925.2-201ENST00000605108 242 ntBASIC2.95□□□□□ -1.94
VPS45Q9NRW7 AC090115.4-201ENST00000609970 188 ntBASIC2.95□□□□□ -1.94
VPS45Q9NRW7 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.95□□□□□ -1.94
VPS45Q9NRW7 AL691447.3-201ENST00000635020 330 ntBASIC2.95□□□□□ -1.94
VPS45Q9NRW7 AC009541.1-201ENST00000438279 2662 ntBASIC2.95□□□□□ -1.94
VPS45Q9NRW7 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.94□□□□□ -1.94
VPS45Q9NRW7 Z75746.1-201ENST00000440243 2080 ntBASIC2.94□□□□□ -1.94
VPS45Q9NRW7 OR56A5-201ENST00000340110 738 ntBASIC2.94□□□□□ -1.94
VPS45Q9NRW7 RNU6-595P-201ENST00000363944 107 ntBASIC2.94□□□□□ -1.94
VPS45Q9NRW7 MIR181B1-201ENST00000385240 110 ntBASIC2.94□□□□□ -1.94
VPS45Q9NRW7 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.94□□□□□ -1.94
VPS45Q9NRW7 AC008267.5-201ENST00000424928 265 ntBASIC2.94□□□□□ -1.94
VPS45Q9NRW7 Z98742.2-201ENST00000431564 187 ntBASIC2.94□□□□□ -1.94
VPS45Q9NRW7 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.94□□□□□ -1.94
VPS45Q9NRW7 AC079354.2-201ENST00000453523 154 ntBASIC2.94□□□□□ -1.94
VPS45Q9NRW7 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.94□□□□□ -1.94
VPS45Q9NRW7 AP002770.2-201ENST00000543613 532 ntBASIC2.94□□□□□ -1.94
VPS45Q9NRW7 AC040896.1-201ENST00000613819 479 ntBASIC2.94□□□□□ -1.94
VPS45Q9NRW7 AC083806.3-201ENST00000614016 455 ntBASIC2.94□□□□□ -1.94
VPS45Q9NRW7 AC091925.1-201ENST00000623204 462 ntBASIC2.94□□□□□ -1.94
VPS45Q9NRW7 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
VPS45Q9NRW7 RNU1-35P-201ENST00000362782 153 ntBASIC2.93□□□□□ -1.94
VPS45Q9NRW7 RNU1-115P-201ENST00000365329 160 ntBASIC2.93□□□□□ -1.94
VPS45Q9NRW7 AC117470.1-201ENST00000381974 330 ntBASIC2.93□□□□□ -1.94
VPS45Q9NRW7 SNORA18.3-201ENST00000384122 132 ntBASIC2.93□□□□□ -1.94
VPS45Q9NRW7 Y_RNA.577-201ENST00000384794 101 ntBASIC2.93□□□□□ -1.94
VPS45Q9NRW7 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
VPS45Q9NRW7 RNU2-23P-201ENST00000410545 195 ntBASIC2.93□□□□□ -1.94
VPS45Q9NRW7 AL451074.5-201ENST00000415894 435 ntBASIC2.93□□□□□ -1.94
VPS45Q9NRW7 MCFD2P1-201ENST00000417812 300 ntBASIC2.93□□□□□ -1.94
VPS45Q9NRW7 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.93□□□□□ -1.94
VPS45Q9NRW7 RPL30P4-201ENST00000429309 333 ntBASIC2.93□□□□□ -1.94
VPS45Q9NRW7 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.93□□□□□ -1.94
VPS45Q9NRW7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.93□□□□□ -1.94
VPS45Q9NRW7 AL031659.1-201ENST00000447075 539 ntBASIC2.93□□□□□ -1.94
VPS45Q9NRW7 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.93□□□□□ -1.94
VPS45Q9NRW7 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.93□□□□□ -1.94
VPS45Q9NRW7 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.93□□□□□ -1.94
VPS45Q9NRW7 AC105137.2-201ENST00000569073 466 ntBASIC2.93□□□□□ -1.94
VPS45Q9NRW7 AC090616.3-201ENST00000582184 217 ntBASIC2.93□□□□□ -1.94
VPS45Q9NRW7 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
VPS45Q9NRW7 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
VPS45Q9NRW7 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
VPS45Q9NRW7 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.92□□□□□ -1.94
VPS45Q9NRW7 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.92□□□□□ -1.94
VPS45Q9NRW7 RNU6-639P-201ENST00000384074 107 ntBASIC2.92□□□□□ -1.94
VPS45Q9NRW7 SNORA70B-201ENST00000384210 135 ntBASIC2.92□□□□□ -1.94
VPS45Q9NRW7 MIR606-201ENST00000384851 96 ntBASIC2.92□□□□□ -1.94
VPS45Q9NRW7 MIR544A-201ENST00000384855 91 ntBASIC2.92□□□□□ -1.94
VPS45Q9NRW7 MIR512-1-201ENST00000384913 84 ntBASIC2.92□□□□□ -1.94
VPS45Q9NRW7 EIF1AXP1-201ENST00000419267 435 ntBASIC2.92□□□□□ -1.94
VPS45Q9NRW7 RPL23AP95-201ENST00000426806 265 ntBASIC2.92□□□□□ -1.94
VPS45Q9NRW7 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.92□□□□□ -1.94
VPS45Q9NRW7 MTND4P19-201ENST00000446659 478 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 155.5 ms