Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AC106785.1-201ENST00000565935 262 ntBASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 MIR4697-201ENST00000582977 78 ntBASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 AC080078.2-201ENST00000603766 501 ntBASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 AP001836.1-201ENST00000604675 523 ntBASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 AC018714.1-201ENST00000605028 208 ntBASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 AL353765.1-201ENST00000605514 183 ntBASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 GHRLOS.1-201ENST00000610995 70 ntBASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 AC107308.1-201ENST00000615897 301 ntBASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 AC009159.2-201ENST00000617603 606 ntBASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 AL607023.1-201ENST00000620045 248 ntBASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 AC138649.3-201ENST00000622154 254 ntBASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 AL078595.3-201ENST00000623815 1166 ntBASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 AC091895.1-201ENST00000624494 256 ntBASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 AC099654.13-201ENST00000639774 207 ntBASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 GNG5P1-201ENST00000255500 204 ntBASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 SNORA58B-201ENST00000364259 136 ntBASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 RNU6-169P-201ENST00000365336 107 ntBASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 Y_RNA.504-201ENST00000384481 104 ntBASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 RNU6-950P-201ENST00000384651 107 ntBASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 RNU6-417P-201ENST00000384712 107 ntBASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 MIR520E-201ENST00000384867 87 ntBASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 MIR653-201ENST00000385279 96 ntBASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 AC012306.1-201ENST00000423267 114 ntBASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 AL035398.1-201ENST00000430869 322 ntBASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 CETN4P-201ENST00000432407 469 ntBASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 AC084290.1-201ENST00000434995 374 ntBASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 SRRM1P2-201ENST00000464531 1192 ntBASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 AC025423.5-201ENST00000550230 219 ntBASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 AL359999.1-201ENST00000604513 294 ntBASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 BNIP3P10-201ENST00000605360 577 ntBASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 RNU4-5P-201ENST00000607255 135 ntBASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 AC009229.3-201ENST00000608056 282 ntBASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 AC104465.1-201ENST00000611365 139 ntBASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 AC008250.2-201ENST00000615261 205 ntBASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 AL136221.1-201ENST00000621449 509 ntBASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 MIR6730-201ENST00000622213 67 ntBASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 AC005858.4-201ENST00000623191 700 ntBASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 AC011155.2-201ENST00000623202 216 ntBASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 SNORD3E-202ENST00000627253 216 ntBASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.33□□□□□ -2.36
CDC42SE1Q9NRR8 AC023934.1-201ENST00000574529 2389 ntBASIC0.32□□□□□ -2.36
CDC42SE1Q9NRR8 Y_RNA.18-201ENST00000362461 102 ntBASIC0.32□□□□□ -2.36
CDC42SE1Q9NRR8 RNU5F-6P-201ENST00000362979 116 ntBASIC0.32□□□□□ -2.36
CDC42SE1Q9NRR8 RNU6-1200P-201ENST00000384162 107 ntBASIC0.32□□□□□ -2.36
CDC42SE1Q9NRR8 SNORA80D-201ENST00000384488 135 ntBASIC0.32□□□□□ -2.36
CDC42SE1Q9NRR8 RNU6-110P-201ENST00000384508 104 ntBASIC0.32□□□□□ -2.36
CDC42SE1Q9NRR8 RNU2-8P-201ENST00000410727 190 ntBASIC0.32□□□□□ -2.36
CDC42SE1Q9NRR8 AC016909.1-201ENST00000415916 166 ntBASIC0.32□□□□□ -2.36
CDC42SE1Q9NRR8 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.32□□□□□ -2.36
CDC42SE1Q9NRR8 SNRPEP10-201ENST00000420249 274 ntBASIC0.32□□□□□ -2.36
CDC42SE1Q9NRR8 AL139415.2-201ENST00000431968 163 ntBASIC0.32□□□□□ -2.36
CDC42SE1Q9NRR8 KRTAP19-11P-201ENST00000439851 104 ntBASIC0.32□□□□□ -2.36
CDC42SE1Q9NRR8 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.32□□□□□ -2.36
CDC42SE1Q9NRR8 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC0.32□□□□□ -2.36
CDC42SE1Q9NRR8 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.32□□□□□ -2.36
CDC42SE1Q9NRR8 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC0.32□□□□□ -2.36
CDC42SE1Q9NRR8 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.32□□□□□ -2.36
CDC42SE1Q9NRR8 AC010486.2-201ENST00000505572 483 ntBASIC0.32□□□□□ -2.36
CDC42SE1Q9NRR8 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.32□□□□□ -2.36
CDC42SE1Q9NRR8 RNU6-948P-201ENST00000516374 107 ntBASIC0.32□□□□□ -2.36
CDC42SE1Q9NRR8 RNU4-54P-201ENST00000516428 129 ntBASIC0.32□□□□□ -2.36
CDC42SE1Q9NRR8 RNA5SP121-201ENST00000516537 101 ntBASIC0.32□□□□□ -2.36
CDC42SE1Q9NRR8 RNU6-1069P-201ENST00000516612 133 ntBASIC0.32□□□□□ -2.36
CDC42SE1Q9NRR8 SNORA25.17-201ENST00000517184 124 ntBASIC0.32□□□□□ -2.36
CDC42SE1Q9NRR8 AC103996.1-201ENST00000555468 102 ntBASIC0.32□□□□□ -2.36
CDC42SE1Q9NRR8 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
CDC42SE1Q9NRR8 MTND5P17-201ENST00000418405 1603 ntBASIC0.31□□□□□ -2.36
CDC42SE1Q9NRR8 AL136360.1-201ENST00000503377 1900 ntBASIC0.31□□□□□ -2.36
CDC42SE1Q9NRR8 SNORA40.4-201ENST00000390971 128 ntBASIC0.31□□□□□ -2.36
CDC42SE1Q9NRR8 MIR942-201ENST00000401111 86 ntBASIC0.31□□□□□ -2.36
CDC42SE1Q9NRR8 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.31□□□□□ -2.36
CDC42SE1Q9NRR8 RN7SKP223-201ENST00000410582 62 ntBASIC0.31□□□□□ -2.36
CDC42SE1Q9NRR8 AC004866.1-201ENST00000411748 78 ntBASIC0.31□□□□□ -2.36
CDC42SE1Q9NRR8 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.31□□□□□ -2.36
CDC42SE1Q9NRR8 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.31□□□□□ -2.36
CDC42SE1Q9NRR8 AL606662.1-201ENST00000445763 553 ntBASIC0.31□□□□□ -2.36
CDC42SE1Q9NRR8 RNU7-21P-201ENST00000459430 62 ntBASIC0.31□□□□□ -2.36
CDC42SE1Q9NRR8 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.31□□□□□ -2.36
CDC42SE1Q9NRR8 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.31□□□□□ -2.36
CDC42SE1Q9NRR8 RNU6-1178P-201ENST00000516674 107 ntBASIC0.31□□□□□ -2.36
CDC42SE1Q9NRR8 AC090572.1-201ENST00000519251 160 ntBASIC0.31□□□□□ -2.36
CDC42SE1Q9NRR8 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.31□□□□□ -2.36
CDC42SE1Q9NRR8 APOOP3-201ENST00000536787 586 ntBASIC0.31□□□□□ -2.36
CDC42SE1Q9NRR8 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.31□□□□□ -2.36
CDC42SE1Q9NRR8 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.31□□□□□ -2.36
CDC42SE1Q9NRR8 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.31□□□□□ -2.36
CDC42SE1Q9NRR8 MIR3683-201ENST00000580847 82 ntBASIC0.31□□□□□ -2.36
CDC42SE1Q9NRR8 MIR4999-201ENST00000585029 91 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms