Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC079354.2-201ENST00000453523 154 ntBASIC2.29□□□□□ -2.04
SIX2Q9NPC8 FO393415.2-201ENST00000480085 343 ntBASIC2.29□□□□□ -2.04
SIX2Q9NPC8 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.29□□□□□ -2.04
SIX2Q9NPC8 AC093303.1-201ENST00000514549 295 ntBASIC2.29□□□□□ -2.04
SIX2Q9NPC8 Y_RNA.701-201ENST00000516812 110 ntBASIC2.29□□□□□ -2.04
SIX2Q9NPC8 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SIX2Q9NPC8 SNRPGP18-201ENST00000553000 214 ntBASIC2.29□□□□□ -2.04
SIX2Q9NPC8 MIR4273-201ENST00000582824 84 ntBASIC2.29□□□□□ -2.04
SIX2Q9NPC8 AC080078.3-201ENST00000605407 463 ntBASIC2.29□□□□□ -2.04
SIX2Q9NPC8 AC096772.1-201ENST00000609146 564 ntBASIC2.29□□□□□ -2.04
SIX2Q9NPC8 AC009318.2-201ENST00000610917 651 ntBASIC2.29□□□□□ -2.04
SIX2Q9NPC8 AP000553.5-201ENST00000641933 54 ntBASIC2.29□□□□□ -2.04
SIX2Q9NPC8 AC009541.1-201ENST00000438279 2662 ntBASIC2.29□□□□□ -2.04
SIX2Q9NPC8 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
SIX2Q9NPC8 MTND5P10-201ENST00000603719 1809 ntBASIC2.28□□□□□ -2.04
SIX2Q9NPC8 MTND5P9-201ENST00000503854 1755 ntBASIC2.28□□□□□ -2.04
SIX2Q9NPC8 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.28□□□□□ -2.04
SIX2Q9NPC8 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.28□□□□□ -2.04
SIX2Q9NPC8 RNA5SP160-201ENST00000364866 120 ntBASIC2.28□□□□□ -2.04
SIX2Q9NPC8 RNU6-1083P-201ENST00000384022 107 ntBASIC2.28□□□□□ -2.04
SIX2Q9NPC8 Y_RNA.533-201ENST00000384596 114 ntBASIC2.28□□□□□ -2.04
SIX2Q9NPC8 RNA5SP338-201ENST00000410495 85 ntBASIC2.28□□□□□ -2.04
SIX2Q9NPC8 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.28□□□□□ -2.04
SIX2Q9NPC8 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.28□□□□□ -2.04
SIX2Q9NPC8 RPL39P29-201ENST00000447779 157 ntBASIC2.28□□□□□ -2.04
SIX2Q9NPC8 AC027575.1-201ENST00000481064 460 ntBASIC2.28□□□□□ -2.04
SIX2Q9NPC8 RNU6-307P-201ENST00000516743 106 ntBASIC2.28□□□□□ -2.04
SIX2Q9NPC8 SCARNA11.3-201ENST00000517276 130 ntBASIC2.28□□□□□ -2.04
SIX2Q9NPC8 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.28□□□□□ -2.04
SIX2Q9NPC8 CBX3P8-201ENST00000532412 525 ntBASIC2.28□□□□□ -2.04
SIX2Q9NPC8 AC079598.5-201ENST00000547460 117 ntBASIC2.28□□□□□ -2.04
SIX2Q9NPC8 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.28□□□□□ -2.04
SIX2Q9NPC8 MIR5696-201ENST00000578474 85 ntBASIC2.28□□□□□ -2.04
SIX2Q9NPC8 AC005899.2-201ENST00000584353 90 ntBASIC2.28□□□□□ -2.04
SIX2Q9NPC8 AL158827.2-201ENST00000602494 330 ntBASIC2.28□□□□□ -2.04
SIX2Q9NPC8 AL356055.1-201ENST00000602528 446 ntBASIC2.28□□□□□ -2.04
SIX2Q9NPC8 HMGB1P24-202ENST00000615653 685 ntBASIC2.28□□□□□ -2.04
SIX2Q9NPC8 AL159153.1-201ENST00000619688 317 ntBASIC2.28□□□□□ -2.04
SIX2Q9NPC8 SNORA43.4-201ENST00000629559 138 ntBASIC2.28□□□□□ -2.04
SIX2Q9NPC8 AL691447.3-201ENST00000635020 330 ntBASIC2.28□□□□□ -2.04
SIX2Q9NPC8 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SIX2Q9NPC8 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.28□□□□□ -2.04
SIX2Q9NPC8 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.28□□□□□ -2.04
SIX2Q9NPC8 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.28□□□□□ -2.05
SIX2Q9NPC8 AL359854.1-201ENST00000614203 1594 ntBASIC2.27□□□□□ -2.05
SIX2Q9NPC8 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SIX2Q9NPC8 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.27□□□□□ -2.05
SIX2Q9NPC8 RNU6-1285P-201ENST00000363480 105 ntBASIC2.27□□□□□ -2.05
SIX2Q9NPC8 SNORD42.2-201ENST00000365570 69 ntBASIC2.27□□□□□ -2.05
SIX2Q9NPC8 RNU6-1040P-201ENST00000383974 107 ntBASIC2.27□□□□□ -2.05
SIX2Q9NPC8 AL023284.1-201ENST00000403956 276 ntBASIC2.27□□□□□ -2.05
SIX2Q9NPC8 RN7SKP61-201ENST00000410642 295 ntBASIC2.27□□□□□ -2.05
SIX2Q9NPC8 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.27□□□□□ -2.05
SIX2Q9NPC8 AL354751.2-201ENST00000415471 210 ntBASIC2.27□□□□□ -2.05
SIX2Q9NPC8 CYCSP48-201ENST00000417124 323 ntBASIC2.27□□□□□ -2.05
SIX2Q9NPC8 AC138623.1-201ENST00000418060 216 ntBASIC2.27□□□□□ -2.05
SIX2Q9NPC8 AC243428.1-201ENST00000421099 264 ntBASIC2.27□□□□□ -2.05
SIX2Q9NPC8 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.27□□□□□ -2.05
SIX2Q9NPC8 AC007677.1-201ENST00000445757 515 ntBASIC2.27□□□□□ -2.05
SIX2Q9NPC8 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.27□□□□□ -2.05
SIX2Q9NPC8 Y_RNA.639-201ENST00000458981 102 ntBASIC2.27□□□□□ -2.05
SIX2Q9NPC8 SNRPGP7-201ENST00000469016 106 ntBASIC2.27□□□□□ -2.05
SIX2Q9NPC8 RPL36AP48-201ENST00000485521 314 ntBASIC2.27□□□□□ -2.05
SIX2Q9NPC8 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.27□□□□□ -2.05
SIX2Q9NPC8 SEM1P1-201ENST00000506694 209 ntBASIC2.27□□□□□ -2.05
SIX2Q9NPC8 RNU6-1170P-201ENST00000515974 106 ntBASIC2.27□□□□□ -2.05
SIX2Q9NPC8 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.27□□□□□ -2.05
SIX2Q9NPC8 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.27□□□□□ -2.05
SIX2Q9NPC8 AL049779.4-201ENST00000604500 156 ntBASIC2.27□□□□□ -2.05
SIX2Q9NPC8 RPL23AP88-201ENST00000605759 454 ntBASIC2.27□□□□□ -2.05
SIX2Q9NPC8 AC090971.5-201ENST00000621102 293 ntBASIC2.27□□□□□ -2.05
SIX2Q9NPC8 AC007792.1-201ENST00000623023 402 ntBASIC2.27□□□□□ -2.05
SIX2Q9NPC8 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.27□□□□□ -2.05
SIX2Q9NPC8 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.27□□□□□ -2.05
SIX2Q9NPC8 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.27□□□□□ -2.05
SIX2Q9NPC8 ZNF299P-201ENST00000406845 1804 ntBASIC2.26□□□□□ -2.05
SIX2Q9NPC8 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SIX2Q9NPC8 MIR449A-201ENST00000362113 91 ntBASIC2.26□□□□□ -2.05
SIX2Q9NPC8 Y_RNA.40-201ENST00000362645 93 ntBASIC2.26□□□□□ -2.05
SIX2Q9NPC8 Y_RNA.48-201ENST00000362710 103 ntBASIC2.26□□□□□ -2.05
SIX2Q9NPC8 SNORD114-19-201ENST00000363072 75 ntBASIC2.26□□□□□ -2.05
SIX2Q9NPC8 AC007064.1-201ENST00000412238 351 ntBASIC2.26□□□□□ -2.05
SIX2Q9NPC8 AL139156.1-201ENST00000412785 841 ntBASIC2.26□□□□□ -2.05
SIX2Q9NPC8 EIF1AXP1-201ENST00000419267 435 ntBASIC2.26□□□□□ -2.05
SIX2Q9NPC8 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.26□□□□□ -2.05
SIX2Q9NPC8 Z98742.2-201ENST00000431564 187 ntBASIC2.26□□□□□ -2.05
SIX2Q9NPC8 AC009296.1-201ENST00000443146 155 ntBASIC2.26□□□□□ -2.05
SIX2Q9NPC8 AL021397.1-201ENST00000451806 248 ntBASIC2.26□□□□□ -2.05
SIX2Q9NPC8 RNU6-717P-201ENST00000459076 104 ntBASIC2.26□□□□□ -2.05
SIX2Q9NPC8 snoU13.14-201ENST00000459372 104 ntBASIC2.26□□□□□ -2.05
SIX2Q9NPC8 AC112771.1-201ENST00000463581 102 ntBASIC2.26□□□□□ -2.05
SIX2Q9NPC8 AC022447.4-201ENST00000504053 364 ntBASIC2.26□□□□□ -2.05
SIX2Q9NPC8 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.26□□□□□ -2.05
SIX2Q9NPC8 RNU6-1153P-201ENST00000516760 105 ntBASIC2.26□□□□□ -2.05
SIX2Q9NPC8 AC109329.1-201ENST00000518744 317 ntBASIC2.26□□□□□ -2.05
SIX2Q9NPC8 HSPE1P4-201ENST00000550617 308 ntBASIC2.26□□□□□ -2.05
SIX2Q9NPC8 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.26□□□□□ -2.05
SIX2Q9NPC8 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.26□□□□□ -2.05
SIX2Q9NPC8 CYP2C61P-201ENST00000604072 290 ntBASIC2.26□□□□□ -2.05
SIX2Q9NPC8 AL080274.1-201ENST00000605565 220 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms