Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AL160413.1-201ENST00000622780 310 ntBASIC2.5□□□□□ -2.01
UPF2Q9HAU5 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.5□□□□□ -2.01
UPF2Q9HAU5 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
UPF2Q9HAU5 ADAM3A-203ENST00000461344 2157 ntBASIC2.49□□□□□ -2.01
UPF2Q9HAU5 AL109809.4-201ENST00000603520 2185 ntBASIC2.49□□□□□ -2.01
UPF2Q9HAU5 SNORD42.2-201ENST00000365570 69 ntBASIC2.49□□□□□ -2.01
UPF2Q9HAU5 RNU6-1083P-201ENST00000384022 107 ntBASIC2.49□□□□□ -2.01
UPF2Q9HAU5 SNORA6-201ENST00000384033 151 ntBASIC2.49□□□□□ -2.01
UPF2Q9HAU5 RNU6-43P-201ENST00000384302 107 ntBASIC2.49□□□□□ -2.01
UPF2Q9HAU5 RNU6-692P-201ENST00000384496 107 ntBASIC2.49□□□□□ -2.01
UPF2Q9HAU5 SNORD116-20-201ENST00000384529 92 ntBASIC2.49□□□□□ -2.01
UPF2Q9HAU5 RNU6-1140P-201ENST00000410517 106 ntBASIC2.49□□□□□ -2.01
UPF2Q9HAU5 RPS20P15-201ENST00000412792 311 ntBASIC2.49□□□□□ -2.01
UPF2Q9HAU5 AC243428.1-201ENST00000421099 264 ntBASIC2.49□□□□□ -2.01
UPF2Q9HAU5 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.49□□□□□ -2.01
UPF2Q9HAU5 AL161651.1-201ENST00000440882 223 ntBASIC2.49□□□□□ -2.01
UPF2Q9HAU5 MTCYBP6-201ENST00000441810 138 ntBASIC2.49□□□□□ -2.01
UPF2Q9HAU5 AC243964.1-201ENST00000441814 261 ntBASIC2.49□□□□□ -2.01
UPF2Q9HAU5 AC007969.2-201ENST00000441891 191 ntBASIC2.49□□□□□ -2.01
UPF2Q9HAU5 IFNA11P-201ENST00000446352 526 ntBASIC2.49□□□□□ -2.01
UPF2Q9HAU5 ELOCP24-201ENST00000456370 334 ntBASIC2.49□□□□□ -2.01
UPF2Q9HAU5 AC018437.1-201ENST00000492214 406 ntBASIC2.49□□□□□ -2.01
UPF2Q9HAU5 HMGN1P13-201ENST00000505795 138 ntBASIC2.49□□□□□ -2.01
UPF2Q9HAU5 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.49□□□□□ -2.01
UPF2Q9HAU5 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.49□□□□□ -2.01
UPF2Q9HAU5 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.49□□□□□ -2.01
UPF2Q9HAU5 ACA59.2-201ENST00000517061 156 ntBASIC2.49□□□□□ -2.01
UPF2Q9HAU5 AC109479.2-201ENST00000517842 174 ntBASIC2.49□□□□□ -2.01
UPF2Q9HAU5 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.49□□□□□ -2.01
UPF2Q9HAU5 CR383656.8-201ENST00000549046 145 ntBASIC2.49□□□□□ -2.01
UPF2Q9HAU5 SNRPGP18-201ENST00000553000 214 ntBASIC2.49□□□□□ -2.01
UPF2Q9HAU5 AC243829.7-201ENST00000633081 225 ntBASIC2.49□□□□□ -2.01
UPF2Q9HAU5 AL669831.3-213ENST00000636676 183 ntBASIC2.49□□□□□ -2.01
UPF2Q9HAU5 AC099654.10-201ENST00000640395 161 ntBASIC2.49□□□□□ -2.01
UPF2Q9HAU5 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
UPF2Q9HAU5 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
UPF2Q9HAU5 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
UPF2Q9HAU5 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.48□□□□□ -2.01
UPF2Q9HAU5 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.48□□□□□ -2.01
UPF2Q9HAU5 RNU6-593P-201ENST00000364716 112 ntBASIC2.48□□□□□ -2.01
UPF2Q9HAU5 Y_RNA.384-201ENST00000383909 102 ntBASIC2.48□□□□□ -2.01
UPF2Q9HAU5 SNORA75.4-201ENST00000391278 119 ntBASIC2.48□□□□□ -2.01
UPF2Q9HAU5 RNU6-1050P-201ENST00000410388 107 ntBASIC2.48□□□□□ -2.01
UPF2Q9HAU5 RNU6-174P-201ENST00000410406 106 ntBASIC2.48□□□□□ -2.01
UPF2Q9HAU5 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.48□□□□□ -2.01
UPF2Q9HAU5 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.48□□□□□ -2.01
UPF2Q9HAU5 RNU6-1037P-201ENST00000459571 107 ntBASIC2.48□□□□□ -2.01
UPF2Q9HAU5 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.48□□□□□ -2.01
UPF2Q9HAU5 AK3P2-201ENST00000507976 429 ntBASIC2.48□□□□□ -2.01
UPF2Q9HAU5 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.48□□□□□ -2.01
UPF2Q9HAU5 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.48□□□□□ -2.01
UPF2Q9HAU5 AC091874.1-201ENST00000511402 339 ntBASIC2.48□□□□□ -2.01
UPF2Q9HAU5 ANP32BP3-201ENST00000559213 706 ntBASIC2.48□□□□□ -2.01
UPF2Q9HAU5 MIR4448-201ENST00000584360 86 ntBASIC2.48□□□□□ -2.01
UPF2Q9HAU5 AC241585.2-209ENST00000638217 143 ntBASIC2.48□□□□□ -2.01
UPF2Q9HAU5 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.48□□□□□ -2.01
UPF2Q9HAU5 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
UPF2Q9HAU5 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
UPF2Q9HAU5 MIR449A-201ENST00000362113 91 ntBASIC2.47□□□□□ -2.01
UPF2Q9HAU5 RNU6-1280P-201ENST00000365211 107 ntBASIC2.47□□□□□ -2.01
UPF2Q9HAU5 Y_RNA.460-201ENST00000384255 102 ntBASIC2.47□□□□□ -2.01
UPF2Q9HAU5 RNU6-622P-201ENST00000384272 103 ntBASIC2.47□□□□□ -2.01
UPF2Q9HAU5 RNU6-331P-201ENST00000384724 107 ntBASIC2.47□□□□□ -2.01
UPF2Q9HAU5 SUMO2P12-201ENST00000405924 140 ntBASIC2.47□□□□□ -2.01
UPF2Q9HAU5 U3.40-201ENST00000408706 208 ntBASIC2.47□□□□□ -2.01
UPF2Q9HAU5 AC074117.2-201ENST00000417130 397 ntBASIC2.47□□□□□ -2.01
UPF2Q9HAU5 IPO7P1-201ENST00000442031 636 ntBASIC2.47□□□□□ -2.01
UPF2Q9HAU5 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.47□□□□□ -2.01
UPF2Q9HAU5 RPL9P9-202ENST00000466501 579 ntBASIC2.47□□□□□ -2.01
UPF2Q9HAU5 MED28P2-201ENST00000475771 317 ntBASIC2.47□□□□□ -2.01
UPF2Q9HAU5 RN7SL274P-201ENST00000492268 272 ntBASIC2.47□□□□□ -2.01
UPF2Q9HAU5 RNU6-377P-201ENST00000515965 102 ntBASIC2.47□□□□□ -2.01
UPF2Q9HAU5 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.47□□□□□ -2.01
UPF2Q9HAU5 AC093249.1-201ENST00000567049 203 ntBASIC2.47□□□□□ -2.01
UPF2Q9HAU5 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.47□□□□□ -2.01
UPF2Q9HAU5 AC090574.1-201ENST00000623186 233 ntBASIC2.47□□□□□ -2.01
UPF2Q9HAU5 AC010329.5-201ENST00000623497 2174 ntBASIC2.47□□□□□ -2.01
UPF2Q9HAU5 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.46□□□□□ -2.02
UPF2Q9HAU5 SNORD50.1-201ENST00000362987 71 ntBASIC2.46□□□□□ -2.02
UPF2Q9HAU5 SNORD32A-201ENST00000364805 84 ntBASIC2.46□□□□□ -2.02
UPF2Q9HAU5 RNU1-52P-201ENST00000384190 164 ntBASIC2.46□□□□□ -2.02
UPF2Q9HAU5 RNU6-843P-201ENST00000384454 104 ntBASIC2.46□□□□□ -2.02
UPF2Q9HAU5 MTCYBP4-201ENST00000401524 249 ntBASIC2.46□□□□□ -2.02
UPF2Q9HAU5 RNU2-40P-201ENST00000410833 196 ntBASIC2.46□□□□□ -2.02
UPF2Q9HAU5 TOMM20P4-201ENST00000427861 435 ntBASIC2.46□□□□□ -2.02
UPF2Q9HAU5 AC027124.2-201ENST00000428249 105 ntBASIC2.46□□□□□ -2.02
UPF2Q9HAU5 MTND3P9-201ENST00000429526 346 ntBASIC2.46□□□□□ -2.02
UPF2Q9HAU5 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.46□□□□□ -2.02
UPF2Q9HAU5 PCMTD1P1-201ENST00000455560 355 ntBASIC2.46□□□□□ -2.02
UPF2Q9HAU5 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.46□□□□□ -2.02
UPF2Q9HAU5 Y_RNA.639-201ENST00000458981 102 ntBASIC2.46□□□□□ -2.02
UPF2Q9HAU5 FO393415.2-201ENST00000480085 343 ntBASIC2.46□□□□□ -2.02
UPF2Q9HAU5 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.46□□□□□ -2.02
UPF2Q9HAU5 RPL23AP94-201ENST00000512518 302 ntBASIC2.46□□□□□ -2.02
UPF2Q9HAU5 RNU6-612P-201ENST00000516909 102 ntBASIC2.46□□□□□ -2.02
UPF2Q9HAU5 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.46□□□□□ -2.02
UPF2Q9HAU5 AL158827.2-201ENST00000602494 330 ntBASIC2.46□□□□□ -2.02
UPF2Q9HAU5 AL391813.1-201ENST00000603098 260 ntBASIC2.46□□□□□ -2.02
UPF2Q9HAU5 AC019193.3-201ENST00000609144 554 ntBASIC2.46□□□□□ -2.02
UPF2Q9HAU5 AC126177.8-201ENST00000618339 1015 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms