Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SEC61A2Q9H9S3 AC092593.1-201ENST00000515413 1815 ntBASIC3.21□□□□□ -1.9
SEC61A2Q9H9S3 PWAR6-201ENST00000552334 4618 ntBASIC3.21□□□□□ -1.9
SEC61A2Q9H9S3 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SEC61A2Q9H9S3 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SEC61A2Q9H9S3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
SEC61A2Q9H9S3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
SEC61A2Q9H9S3 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SEC61A2Q9H9S3 Y_RNA.217-201ENST00000364214 105 ntBASIC3.2□□□□□ -1.9
SEC61A2Q9H9S3 Y_RNA.262-201ENST00000364641 102 ntBASIC3.2□□□□□ -1.9
SEC61A2Q9H9S3 RNA5SP167-201ENST00000365461 116 ntBASIC3.2□□□□□ -1.9
SEC61A2Q9H9S3 RNU6-211P-201ENST00000384047 107 ntBASIC3.2□□□□□ -1.9
SEC61A2Q9H9S3 PTMAP2-201ENST00000397627 327 ntBASIC3.2□□□□□ -1.9
SEC61A2Q9H9S3 EI24P2-201ENST00000397776 1076 ntBASIC3.2□□□□□ -1.9
SEC61A2Q9H9S3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.2□□□□□ -1.9
SEC61A2Q9H9S3 OOSP1P1-201ENST00000423265 274 ntBASIC3.2□□□□□ -1.9
SEC61A2Q9H9S3 AC006539.3-201ENST00000454258 129 ntBASIC3.2□□□□□ -1.9
SEC61A2Q9H9S3 Y_RNA.641-201ENST00000459414 105 ntBASIC3.2□□□□□ -1.9
SEC61A2Q9H9S3 RN7SL330P-201ENST00000469709 307 ntBASIC3.2□□□□□ -1.9
SEC61A2Q9H9S3 AC090525.1-201ENST00000479116 478 ntBASIC3.2□□□□□ -1.9
SEC61A2Q9H9S3 HMGB3P3-201ENST00000510526 400 ntBASIC3.2□□□□□ -1.9
SEC61A2Q9H9S3 RNU5F-8P-201ENST00000515941 111 ntBASIC3.2□□□□□ -1.9
SEC61A2Q9H9S3 RNA5SP54-201ENST00000516951 92 ntBASIC3.2□□□□□ -1.9
SEC61A2Q9H9S3 ACA59.2-201ENST00000517061 156 ntBASIC3.2□□□□□ -1.9
SEC61A2Q9H9S3 AC233702.2-202ENST00000562547 291 ntBASIC3.2□□□□□ -1.9
SEC61A2Q9H9S3 MIR3690-201ENST00000580266 75 ntBASIC3.2□□□□□ -1.9
SEC61A2Q9H9S3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.2□□□□□ -1.9
SEC61A2Q9H9S3 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.2□□□□□ -1.9
SEC61A2Q9H9S3 AC091932.3-201ENST00000624223 323 ntBASIC3.2□□□□□ -1.9
SEC61A2Q9H9S3 AL034408.1-202ENST00000636088 415 ntBASIC3.2□□□□□ -1.9
SEC61A2Q9H9S3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.2□□□□□ -1.9
SEC61A2Q9H9S3 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
SEC61A2Q9H9S3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SEC61A2Q9H9S3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SEC61A2Q9H9S3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.2□□□□□ -1.9
SEC61A2Q9H9S3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.19□□□□□ -1.9
SEC61A2Q9H9S3 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SEC61A2Q9H9S3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SEC61A2Q9H9S3 MIR670-201ENST00000390142 98 ntBASIC3.19□□□□□ -1.9
SEC61A2Q9H9S3 AL512633.1-201ENST00000399931 655 ntBASIC3.19□□□□□ -1.9
SEC61A2Q9H9S3 AL133475.1-201ENST00000404414 305 ntBASIC3.19□□□□□ -1.9
SEC61A2Q9H9S3 U3.39-201ENST00000408569 239 ntBASIC3.19□□□□□ -1.9
SEC61A2Q9H9S3 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.19□□□□□ -1.9
SEC61A2Q9H9S3 RAB28P5-201ENST00000427490 651 ntBASIC3.19□□□□□ -1.9
SEC61A2Q9H9S3 AC091179.3-201ENST00000474761 144 ntBASIC3.19□□□□□ -1.9
SEC61A2Q9H9S3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.19□□□□□ -1.9
SEC61A2Q9H9S3 AC074133.1-201ENST00000515696 183 ntBASIC3.19□□□□□ -1.9
SEC61A2Q9H9S3 RNU6-191P-201ENST00000516295 94 ntBASIC3.19□□□□□ -1.9
SEC61A2Q9H9S3 RNU6-155P-201ENST00000516347 100 ntBASIC3.19□□□□□ -1.9
SEC61A2Q9H9S3 SNORA70.18-201ENST00000516696 98 ntBASIC3.19□□□□□ -1.9
SEC61A2Q9H9S3 CKS1BP7-201ENST00000522230 235 ntBASIC3.19□□□□□ -1.9
SEC61A2Q9H9S3 NACAP3-201ENST00000552100 481 ntBASIC3.19□□□□□ -1.9
SEC61A2Q9H9S3 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.19□□□□□ -1.9
SEC61A2Q9H9S3 MIR4738-201ENST00000579134 87 ntBASIC3.19□□□□□ -1.9
SEC61A2Q9H9S3 AC090897.2-201ENST00000581715 130 ntBASIC3.19□□□□□ -1.9
SEC61A2Q9H9S3 DEFB117-201ENST00000602356 141 ntBASIC3.19□□□□□ -1.9
SEC61A2Q9H9S3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.19□□□□□ -1.9
SEC61A2Q9H9S3 AP001485.1-201ENST00000604799 199 ntBASIC3.19□□□□□ -1.9
SEC61A2Q9H9S3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
SEC61A2Q9H9S3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SEC61A2Q9H9S3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SEC61A2Q9H9S3 AC110491.1-201ENST00000562191 2010 ntBASIC3.19□□□□□ -1.9
SEC61A2Q9H9S3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SEC61A2Q9H9S3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.18□□□□□ -1.9
SEC61A2Q9H9S3 RNA5SP197-201ENST00000363357 119 ntBASIC3.18□□□□□ -1.9
SEC61A2Q9H9S3 RNU6-283P-201ENST00000364788 107 ntBASIC3.18□□□□□ -1.9
SEC61A2Q9H9S3 SNORD6-201ENST00000365444 73 ntBASIC3.18□□□□□ -1.9
SEC61A2Q9H9S3 AL357139.1-201ENST00000407792 426 ntBASIC3.18□□□□□ -1.9
SEC61A2Q9H9S3 DBIP2-201ENST00000419076 262 ntBASIC3.18□□□□□ -1.9
SEC61A2Q9H9S3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.18□□□□□ -1.9
SEC61A2Q9H9S3 BPY2DP-201ENST00000422208 265 ntBASIC3.18□□□□□ -1.9
SEC61A2Q9H9S3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.18□□□□□ -1.9
SEC61A2Q9H9S3 AL121594.1-201ENST00000475906 575 ntBASIC3.18□□□□□ -1.9
SEC61A2Q9H9S3 RPL21P129-201ENST00000491732 478 ntBASIC3.18□□□□□ -1.9
SEC61A2Q9H9S3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.18□□□□□ -1.9
SEC61A2Q9H9S3 RNU2-27P-201ENST00000516185 142 ntBASIC3.18□□□□□ -1.9
SEC61A2Q9H9S3 RNA5SP309-201ENST00000516670 106 ntBASIC3.18□□□□□ -1.9
SEC61A2Q9H9S3 AC026403.1-201ENST00000518938 295 ntBASIC3.18□□□□□ -1.9
SEC61A2Q9H9S3 AC093331.1-201ENST00000521474 169 ntBASIC3.18□□□□□ -1.9
SEC61A2Q9H9S3 AC006199.1-201ENST00000548728 219 ntBASIC3.18□□□□□ -1.9
SEC61A2Q9H9S3 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.18□□□□□ -1.9
SEC61A2Q9H9S3 MIR3922-201ENST00000585192 84 ntBASIC3.18□□□□□ -1.9
SEC61A2Q9H9S3 HMGN2P15-201ENST00000585707 270 ntBASIC3.18□□□□□ -1.9
SEC61A2Q9H9S3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.18□□□□□ -1.9
SEC61A2Q9H9S3 AC073308.1-201ENST00000623696 305 ntBASIC3.18□□□□□ -1.9
SEC61A2Q9H9S3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.18□□□□□ -1.9
SEC61A2Q9H9S3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.18□□□□□ -1.9
SEC61A2Q9H9S3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SEC61A2Q9H9S3 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SEC61A2Q9H9S3 AC022336.2-201ENST00000568966 2538 ntBASIC3.18□□□□□ -1.9
SEC61A2Q9H9S3 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.17□□□□□ -1.9
SEC61A2Q9H9S3 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SEC61A2Q9H9S3 AL109809.4-201ENST00000603520 2185 ntBASIC3.17□□□□□ -1.9
SEC61A2Q9H9S3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SEC61A2Q9H9S3 SNORD9-201ENST00000362566 104 ntBASIC3.17□□□□□ -1.9
SEC61A2Q9H9S3 RNU6-799P-201ENST00000363567 107 ntBASIC3.17□□□□□ -1.9
SEC61A2Q9H9S3 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.17□□□□□ -1.9
SEC61A2Q9H9S3 RNU6-1130P-201ENST00000365434 107 ntBASIC3.17□□□□□ -1.9
SEC61A2Q9H9S3 SNORD116-18-201ENST00000383961 92 ntBASIC3.17□□□□□ -1.9
SEC61A2Q9H9S3 RNU6-793P-201ENST00000384233 104 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms