Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 RNU6-1088P-201ENST00000516850 104 ntBASIC1.59□□□□□ -2.15
RSPO3Q9BXY4 SNORA31.23-201ENST00000517219 133 ntBASIC1.59□□□□□ -2.15
RSPO3Q9BXY4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.59□□□□□ -2.15
RSPO3Q9BXY4 SCOCP1-201ENST00000554676 349 ntBASIC1.59□□□□□ -2.15
RSPO3Q9BXY4 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.59□□□□□ -2.15
RSPO3Q9BXY4 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.59□□□□□ -2.15
RSPO3Q9BXY4 MIR3683-201ENST00000580847 82 ntBASIC1.59□□□□□ -2.15
RSPO3Q9BXY4 AC090897.2-201ENST00000581715 130 ntBASIC1.59□□□□□ -2.15
RSPO3Q9BXY4 MIR3672-201ENST00000584290 82 ntBASIC1.59□□□□□ -2.15
RSPO3Q9BXY4 AC005034.5-201ENST00000604219 466 ntBASIC1.59□□□□□ -2.15
RSPO3Q9BXY4 AC091152.3-201ENST00000604227 325 ntBASIC1.59□□□□□ -2.15
RSPO3Q9BXY4 AC087045.1-201ENST00000605856 382 ntBASIC1.59□□□□□ -2.15
RSPO3Q9BXY4 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.59□□□□□ -2.15
RSPO3Q9BXY4 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.59□□□□□ -2.15
RSPO3Q9BXY4 AC005296.1-201ENST00000616145 209 ntBASIC1.59□□□□□ -2.15
RSPO3Q9BXY4 AC009248.2-201ENST00000619826 254 ntBASIC1.59□□□□□ -2.15
RSPO3Q9BXY4 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 RNA5SP125-201ENST00000364843 120 ntBASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 Y_RNA.301-201ENST00000364990 103 ntBASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 EIF4E2P1-201ENST00000393781 255 ntBASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 SNORD56-201ENST00000413522 71 ntBASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 PDCL2P1-201ENST00000419302 352 ntBASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 CYCSP49-201ENST00000420810 319 ntBASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 AL445685.2-201ENST00000422551 342 ntBASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 MTCO3P18-201ENST00000440206 761 ntBASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 BTF3P15-201ENST00000455606 336 ntBASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 AC007547.1-201ENST00000462177 490 ntBASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 AC132942.1-201ENST00000486753 483 ntBASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 AC092436.3-201ENST00000511788 257 ntBASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 RNU6-507P-201ENST00000516045 100 ntBASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 RNU4-49P-201ENST00000516080 140 ntBASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 AP005597.4-201ENST00000526762 229 ntBASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 CYCSP27-201ENST00000527643 293 ntBASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 AC118273.2-201ENST00000532092 465 ntBASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 NACAP3-201ENST00000552100 481 ntBASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 MIR3199-1-201ENST00000582434 88 ntBASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 RNU6-85P-201ENST00000605989 107 ntBASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 AL357078.3-201ENST00000607528 618 ntBASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 AC064836.2-201ENST00000609491 462 ntBASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
RSPO3Q9BXY4 AC010889.1-201ENST00000566193 2666 ntBASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 RNU6-428P-201ENST00000362942 107 ntBASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 RNY1P10-201ENST00000363268 113 ntBASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 SNORA72.1-201ENST00000363485 129 ntBASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 Y_RNA.414-201ENST00000384011 101 ntBASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 Y_RNA.480-201ENST00000384364 102 ntBASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 RNU6-750P-201ENST00000390946 107 ntBASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 MIR450B-201ENST00000401182 78 ntBASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 RN7SKP158-201ENST00000410453 326 ntBASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 VN1R36P-201ENST00000414936 291 ntBASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 RPL21P111-201ENST00000418453 477 ntBASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 ARL5AP1-201ENST00000418991 388 ntBASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 AL590632.1-201ENST00000424289 371 ntBASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 NDUFA5P4-201ENST00000436704 385 ntBASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 IFNA20P-201ENST00000436840 528 ntBASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 AL353689.1-201ENST00000438895 199 ntBASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 AL161651.1-201ENST00000440882 223 ntBASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 MTND4P18-201ENST00000447010 465 ntBASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 RNU6-329P-201ENST00000459618 107 ntBASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 MTCYBP40-201ENST00000509390 1135 ntBASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 SNORA19.2-201ENST00000516013 114 ntBASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 SNORA31.6-201ENST00000516241 130 ntBASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 RNU6-323P-201ENST00000521915 107 ntBASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 AC025423.5-201ENST00000550230 219 ntBASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 MIR548S-201ENST00000581352 82 ntBASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 MIR3941-201ENST00000582572 103 ntBASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 MIR8081-201ENST00000611533 95 ntBASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 AL138726.1-201ENST00000614873 333 ntBASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 AC092794.2-201ENST00000620933 563 ntBASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 MIR3199-2-201ENST00000636243 86 ntBASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
RSPO3Q9BXY4 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.56□□□□□ -2.16
RSPO3Q9BXY4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.56□□□□□ -2.16
RSPO3Q9BXY4 CBX3P1-201ENST00000325243 554 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms