Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AL139095.1-201ENST00000404326 391 ntBASIC3.25□□□□□ -1.89
SALL3Q9BXA9 AL031121.1-201ENST00000406553 254 ntBASIC3.25□□□□□ -1.89
SALL3Q9BXA9 AC092423.1-201ENST00000430165 186 ntBASIC3.25□□□□□ -1.89
SALL3Q9BXA9 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.25□□□□□ -1.89
SALL3Q9BXA9 AL590664.1-201ENST00000448065 339 ntBASIC3.25□□□□□ -1.89
SALL3Q9BXA9 RNU7-169P-201ENST00000459456 61 ntBASIC3.25□□□□□ -1.89
SALL3Q9BXA9 RPL39P38-201ENST00000467018 153 ntBASIC3.25□□□□□ -1.89
SALL3Q9BXA9 AC025465.3-201ENST00000510570 311 ntBASIC3.25□□□□□ -1.89
SALL3Q9BXA9 RNA5SP282-201ENST00000516355 108 ntBASIC3.25□□□□□ -1.89
SALL3Q9BXA9 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.25□□□□□ -1.89
SALL3Q9BXA9 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.25□□□□□ -1.89
SALL3Q9BXA9 MIR4506-201ENST00000584693 77 ntBASIC3.25□□□□□ -1.89
SALL3Q9BXA9 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.25□□□□□ -1.89
SALL3Q9BXA9 AC130454.1-201ENST00000622948 401 ntBASIC3.25□□□□□ -1.89
SALL3Q9BXA9 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.25□□□□□ -1.89
SALL3Q9BXA9 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.25□□□□□ -1.89
SALL3Q9BXA9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SALL3Q9BXA9 AC009487.2-201ENST00000420969 6821 ntBASIC3.25□□□□□ -1.89
SALL3Q9BXA9 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
SALL3Q9BXA9 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SALL3Q9BXA9 Y_RNA.64-201ENST00000362845 102 ntBASIC3.24□□□□□ -1.89
SALL3Q9BXA9 RNU1-76P-201ENST00000362903 159 ntBASIC3.24□□□□□ -1.89
SALL3Q9BXA9 SNORA20.1-201ENST00000364790 130 ntBASIC3.24□□□□□ -1.89
SALL3Q9BXA9 Y_RNA.483-201ENST00000384380 101 ntBASIC3.24□□□□□ -1.89
SALL3Q9BXA9 MIR10A-201ENST00000385043 110 ntBASIC3.24□□□□□ -1.89
SALL3Q9BXA9 MIR548I2-201ENST00000408348 149 ntBASIC3.24□□□□□ -1.89
SALL3Q9BXA9 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.24□□□□□ -1.89
SALL3Q9BXA9 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SALL3Q9BXA9 AC079354.2-201ENST00000453523 154 ntBASIC3.24□□□□□ -1.89
SALL3Q9BXA9 RPS29P27-201ENST00000463711 170 ntBASIC3.24□□□□□ -1.89
SALL3Q9BXA9 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.24□□□□□ -1.89
SALL3Q9BXA9 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.24□□□□□ -1.89
SALL3Q9BXA9 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.24□□□□□ -1.89
SALL3Q9BXA9 RNU6-377P-201ENST00000515965 102 ntBASIC3.24□□□□□ -1.89
SALL3Q9BXA9 Y_RNA.680-201ENST00000516441 93 ntBASIC3.24□□□□□ -1.89
SALL3Q9BXA9 RNU6-612P-201ENST00000516909 102 ntBASIC3.24□□□□□ -1.89
SALL3Q9BXA9 MIR2355-201ENST00000517199 87 ntBASIC3.24□□□□□ -1.89
SALL3Q9BXA9 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.24□□□□□ -1.89
SALL3Q9BXA9 AL590705.4-201ENST00000532209 134 ntBASIC3.24□□□□□ -1.89
SALL3Q9BXA9 HSPE1P20-201ENST00000538133 289 ntBASIC3.24□□□□□ -1.89
SALL3Q9BXA9 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.24□□□□□ -1.89
SALL3Q9BXA9 AC103996.1-201ENST00000555468 102 ntBASIC3.24□□□□□ -1.89
SALL3Q9BXA9 AC104581.2-201ENST00000572227 430 ntBASIC3.24□□□□□ -1.89
SALL3Q9BXA9 MIR3128-201ENST00000581957 66 ntBASIC3.24□□□□□ -1.89
SALL3Q9BXA9 MIR4435-1-201ENST00000582552 80 ntBASIC3.24□□□□□ -1.89
SALL3Q9BXA9 MIR4635-201ENST00000583759 79 ntBASIC3.24□□□□□ -1.89
SALL3Q9BXA9 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.24□□□□□ -1.89
SALL3Q9BXA9 AC027309.3-201ENST00000623419 351 ntBASIC3.24□□□□□ -1.89
SALL3Q9BXA9 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.24□□□□□ -1.89
SALL3Q9BXA9 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
SALL3Q9BXA9 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SALL3Q9BXA9 AC008568.2-201ENST00000623862 2313 ntBASIC3.24□□□□□ -1.89
SALL3Q9BXA9 AP000560.1-201ENST00000624150 1937 ntBASIC3.24□□□□□ -1.89
SALL3Q9BXA9 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.24□□□□□ -1.89
SALL3Q9BXA9 AC110774.1-201ENST00000623567 2018 ntBASIC3.24□□□□□ -1.89
SALL3Q9BXA9 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
SALL3Q9BXA9 Y_RNA.27-201ENST00000362540 103 ntBASIC3.23□□□□□ -1.89
SALL3Q9BXA9 RNU6-227P-201ENST00000362865 103 ntBASIC3.23□□□□□ -1.89
SALL3Q9BXA9 U3.13-201ENST00000364804 214 ntBASIC3.23□□□□□ -1.89
SALL3Q9BXA9 MIR628-201ENST00000385229 95 ntBASIC3.23□□□□□ -1.89
SALL3Q9BXA9 RNA5SP494-201ENST00000410653 129 ntBASIC3.23□□□□□ -1.89
SALL3Q9BXA9 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.23□□□□□ -1.89
SALL3Q9BXA9 LINC01399-202ENST00000458450 244 ntBASIC3.23□□□□□ -1.89
SALL3Q9BXA9 AC092798.1-201ENST00000458542 409 ntBASIC3.23□□□□□ -1.89
SALL3Q9BXA9 AK3P2-201ENST00000507976 429 ntBASIC3.23□□□□□ -1.89
SALL3Q9BXA9 MTND1P19-201ENST00000511780 315 ntBASIC3.23□□□□□ -1.89
SALL3Q9BXA9 RNA5SP385-201ENST00000515947 110 ntBASIC3.23□□□□□ -1.89
SALL3Q9BXA9 RNU6-237P-201ENST00000515985 71 ntBASIC3.23□□□□□ -1.89
SALL3Q9BXA9 SNORA31.19-201ENST00000517079 126 ntBASIC3.23□□□□□ -1.89
SALL3Q9BXA9 AP003733.2-201ENST00000529409 171 ntBASIC3.23□□□□□ -1.89
SALL3Q9BXA9 TRAV28-201ENST00000557548 323 ntBASIC3.23□□□□□ -1.89
SALL3Q9BXA9 AL355877.2-201ENST00000603670 358 ntBASIC3.23□□□□□ -1.89
SALL3Q9BXA9 U4.7-201ENST00000638126 106 ntBASIC3.23□□□□□ -1.89
SALL3Q9BXA9 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SALL3Q9BXA9 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.23□□□□□ -1.89
SALL3Q9BXA9 Z75746.1-201ENST00000440243 2080 ntBASIC3.23□□□□□ -1.89
SALL3Q9BXA9 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.22□□□□□ -1.89
SALL3Q9BXA9 Y_RNA.515-201ENST00000384535 112 ntBASIC3.22□□□□□ -1.89
SALL3Q9BXA9 MIR190B-201ENST00000401119 79 ntBASIC3.22□□□□□ -1.89
SALL3Q9BXA9 RNU2-68P-201ENST00000410878 191 ntBASIC3.22□□□□□ -1.89
SALL3Q9BXA9 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.22□□□□□ -1.89
SALL3Q9BXA9 AC092047.1-201ENST00000424997 240 ntBASIC3.22□□□□□ -1.89
SALL3Q9BXA9 AC025750.2-201ENST00000442609 450 ntBASIC3.22□□□□□ -1.89
SALL3Q9BXA9 AL078601.1-201ENST00000444542 271 ntBASIC3.22□□□□□ -1.89
SALL3Q9BXA9 AC009237.8-201ENST00000445492 379 ntBASIC3.22□□□□□ -1.89
SALL3Q9BXA9 AC108938.1-201ENST00000451204 136 ntBASIC3.22□□□□□ -1.89
SALL3Q9BXA9 AL031183.1-201ENST00000457667 207 ntBASIC3.22□□□□□ -1.89
SALL3Q9BXA9 RNU6-255P-201ENST00000516957 105 ntBASIC3.22□□□□□ -1.89
SALL3Q9BXA9 Y_RNA.713-201ENST00000517013 96 ntBASIC3.22□□□□□ -1.89
SALL3Q9BXA9 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.22□□□□□ -1.89
SALL3Q9BXA9 GTF3AP2-201ENST00000557014 266 ntBASIC3.22□□□□□ -1.89
SALL3Q9BXA9 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.22□□□□□ -1.89
SALL3Q9BXA9 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SALL3Q9BXA9 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SALL3Q9BXA9 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SALL3Q9BXA9 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SALL3Q9BXA9 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SALL3Q9BXA9 MAPK10-266ENST00000641066 6555 ntBASIC3.22□□□□□ -1.89
SALL3Q9BXA9 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SALL3Q9BXA9 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms