Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 RPL30P7-201ENST00000479312 323 ntBASIC0.85□□□□□ -2.27
UPK3BQ9BT76 AC079140.5-201ENST00000507882 310 ntBASIC0.85□□□□□ -2.27
UPK3BQ9BT76 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.85□□□□□ -2.27
UPK3BQ9BT76 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.85□□□□□ -2.27
UPK3BQ9BT76 LRRC34P2-201ENST00000514850 553 ntBASIC0.85□□□□□ -2.27
UPK3BQ9BT76 RNA5SP437-201ENST00000517249 129 ntBASIC0.85□□□□□ -2.27
UPK3BQ9BT76 AC019176.1-201ENST00000518519 225 ntBASIC0.85□□□□□ -2.27
UPK3BQ9BT76 RAB11AP2-201ENST00000545905 639 ntBASIC0.85□□□□□ -2.27
UPK3BQ9BT76 ZNF321P-202ENST00000550843 495 ntBASIC0.85□□□□□ -2.27
UPK3BQ9BT76 EIF4A1P12-201ENST00000551910 141 ntBASIC0.85□□□□□ -2.27
UPK3BQ9BT76 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.85□□□□□ -2.27
UPK3BQ9BT76 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.85□□□□□ -2.27
UPK3BQ9BT76 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.85□□□□□ -2.27
UPK3BQ9BT76 AC012414.6-201ENST00000568241 401 ntBASIC0.85□□□□□ -2.27
UPK3BQ9BT76 AP005136.1-201ENST00000579765 429 ntBASIC0.85□□□□□ -2.27
UPK3BQ9BT76 MIR3682-201ENST00000581338 84 ntBASIC0.85□□□□□ -2.27
UPK3BQ9BT76 BNIP3P8-201ENST00000597863 560 ntBASIC0.85□□□□□ -2.27
UPK3BQ9BT76 AC095038.3-201ENST00000634439 195 ntBASIC0.85□□□□□ -2.27
UPK3BQ9BT76 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.85□□□□□ -2.27
UPK3BQ9BT76 RNU4-28P-201ENST00000364739 141 ntBASIC0.84□□□□□ -2.27
UPK3BQ9BT76 RNU4-91P-201ENST00000364778 135 ntBASIC0.84□□□□□ -2.27
UPK3BQ9BT76 SNORD32A-201ENST00000364805 84 ntBASIC0.84□□□□□ -2.27
UPK3BQ9BT76 RNU6-1303P-201ENST00000364841 107 ntBASIC0.84□□□□□ -2.27
UPK3BQ9BT76 Y_RNA.480-201ENST00000384364 102 ntBASIC0.84□□□□□ -2.27
UPK3BQ9BT76 RNU6-1065P-201ENST00000384513 106 ntBASIC0.84□□□□□ -2.27
UPK3BQ9BT76 MIR548B-201ENST00000385247 97 ntBASIC0.84□□□□□ -2.27
UPK3BQ9BT76 MIR618-201ENST00000385287 98 ntBASIC0.84□□□□□ -2.27
UPK3BQ9BT76 MRPL35P1-201ENST00000404272 572 ntBASIC0.84□□□□□ -2.27
UPK3BQ9BT76 AL161935.2-201ENST00000414627 60 ntBASIC0.84□□□□□ -2.27
UPK3BQ9BT76 CST2P1-201ENST00000425770 87 ntBASIC0.84□□□□□ -2.27
UPK3BQ9BT76 AL133396.1-201ENST00000432048 687 ntBASIC0.84□□□□□ -2.27
UPK3BQ9BT76 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.84□□□□□ -2.27
UPK3BQ9BT76 AC245047.4-201ENST00000433189 144 ntBASIC0.84□□□□□ -2.27
UPK3BQ9BT76 AC002486.1-201ENST00000435098 391 ntBASIC0.84□□□□□ -2.27
UPK3BQ9BT76 GTF2IP13-201ENST00000438487 386 ntBASIC0.84□□□□□ -2.27
UPK3BQ9BT76 OR2AQ1P-201ENST00000451972 200 ntBASIC0.84□□□□□ -2.27
UPK3BQ9BT76 AC013470.1-201ENST00000453438 462 ntBASIC0.84□□□□□ -2.27
UPK3BQ9BT76 RNU7-182P-201ENST00000459009 62 ntBASIC0.84□□□□□ -2.27
UPK3BQ9BT76 SNORD11.1-201ENST00000459482 85 ntBASIC0.84□□□□□ -2.27
UPK3BQ9BT76 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.84□□□□□ -2.27
UPK3BQ9BT76 RPS23P5-201ENST00000495419 428 ntBASIC0.84□□□□□ -2.27
UPK3BQ9BT76 AC016632.1-201ENST00000503994 196 ntBASIC0.84□□□□□ -2.27
UPK3BQ9BT76 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.84□□□□□ -2.27
UPK3BQ9BT76 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.84□□□□□ -2.27
UPK3BQ9BT76 FABP5P5-201ENST00000515537 406 ntBASIC0.84□□□□□ -2.27
UPK3BQ9BT76 RNU6-567P-201ENST00000516746 107 ntBASIC0.84□□□□□ -2.27
UPK3BQ9BT76 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.84□□□□□ -2.27
UPK3BQ9BT76 AC078795.3-201ENST00000602913 472 ntBASIC0.84□□□□□ -2.27
UPK3BQ9BT76 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.84□□□□□ -2.27
UPK3BQ9BT76 SEPT14P19-203ENST00000633205 211 ntBASIC0.84□□□□□ -2.27
UPK3BQ9BT76 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.84□□□□□ -2.28
UPK3BQ9BT76 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.84□□□□□ -2.28
UPK3BQ9BT76 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.84□□□□□ -2.28
UPK3BQ9BT76 RNU6-552P-201ENST00000362869 119 ntBASIC0.83□□□□□ -2.28
UPK3BQ9BT76 RNU1-96P-201ENST00000364163 162 ntBASIC0.83□□□□□ -2.28
UPK3BQ9BT76 RNY4P34-201ENST00000364779 95 ntBASIC0.83□□□□□ -2.28
UPK3BQ9BT76 Y_RNA.367-201ENST00000365544 101 ntBASIC0.83□□□□□ -2.28
UPK3BQ9BT76 RNU6-378P-201ENST00000384324 107 ntBASIC0.83□□□□□ -2.28
UPK3BQ9BT76 RNU6-393P-201ENST00000384475 107 ntBASIC0.83□□□□□ -2.28
UPK3BQ9BT76 MIR454-201ENST00000390180 115 ntBASIC0.83□□□□□ -2.28
UPK3BQ9BT76 RPS29P13-201ENST00000402041 169 ntBASIC0.83□□□□□ -2.28
UPK3BQ9BT76 MIR1285-1-201ENST00000408593 84 ntBASIC0.83□□□□□ -2.28
UPK3BQ9BT76 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.83□□□□□ -2.28
UPK3BQ9BT76 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.83□□□□□ -2.28
UPK3BQ9BT76 EIF1P1-201ENST00000421436 341 ntBASIC0.83□□□□□ -2.28
UPK3BQ9BT76 MTCO3P29-201ENST00000432119 779 ntBASIC0.83□□□□□ -2.28
UPK3BQ9BT76 HSFY7P-201ENST00000432672 318 ntBASIC0.83□□□□□ -2.28
UPK3BQ9BT76 GPR143P-201ENST00000434155 205 ntBASIC0.83□□□□□ -2.28
UPK3BQ9BT76 HSFY8P-201ENST00000437934 318 ntBASIC0.83□□□□□ -2.28
UPK3BQ9BT76 AC069257.2-201ENST00000441819 155 ntBASIC0.83□□□□□ -2.28
UPK3BQ9BT76 HSFY5P-201ENST00000453726 309 ntBASIC0.83□□□□□ -2.28
UPK3BQ9BT76 AC016925.1-201ENST00000458303 298 ntBASIC0.83□□□□□ -2.28
UPK3BQ9BT76 OR2A41P-201ENST00000473586 105 ntBASIC0.83□□□□□ -2.28
UPK3BQ9BT76 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.83□□□□□ -2.28
UPK3BQ9BT76 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.83□□□□□ -2.28
UPK3BQ9BT76 SCARNA1-201ENST00000517138 166 ntBASIC0.83□□□□□ -2.28
UPK3BQ9BT76 AC021231.3-201ENST00000558497 370 ntBASIC0.83□□□□□ -2.28
UPK3BQ9BT76 CYP4A27P-201ENST00000567218 190 ntBASIC0.83□□□□□ -2.28
UPK3BQ9BT76 MIR4775-201ENST00000581168 75 ntBASIC0.83□□□□□ -2.28
UPK3BQ9BT76 MIR3976-201ENST00000606807 139 ntBASIC0.83□□□□□ -2.28
UPK3BQ9BT76 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.83□□□□□ -2.28
UPK3BQ9BT76 AC008250.2-201ENST00000615261 205 ntBASIC0.83□□□□□ -2.28
UPK3BQ9BT76 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.83□□□□□ -2.28
UPK3BQ9BT76 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.83□□□□□ -2.28
UPK3BQ9BT76 RNU6-434P-201ENST00000384376 107 ntBASIC0.82□□□□□ -2.28
UPK3BQ9BT76 SNORA26.3-201ENST00000391119 136 ntBASIC0.82□□□□□ -2.28
UPK3BQ9BT76 RPL37P10-201ENST00000412884 288 ntBASIC0.82□□□□□ -2.28
UPK3BQ9BT76 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.82□□□□□ -2.28
UPK3BQ9BT76 AL593851.1-201ENST00000426171 157 ntBASIC0.82□□□□□ -2.28
UPK3BQ9BT76 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.82□□□□□ -2.28
UPK3BQ9BT76 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.82□□□□□ -2.28
UPK3BQ9BT76 AL596276.1-201ENST00000434465 418 ntBASIC0.82□□□□□ -2.28
UPK3BQ9BT76 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.82□□□□□ -2.28
UPK3BQ9BT76 PRPS1P1-201ENST00000445305 876 ntBASIC0.82□□□□□ -2.28
UPK3BQ9BT76 AL031274.1-201ENST00000450334 232 ntBASIC0.82□□□□□ -2.28
UPK3BQ9BT76 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.82□□□□□ -2.28
UPK3BQ9BT76 AL162395.1-201ENST00000457882 422 ntBASIC0.82□□□□□ -2.28
UPK3BQ9BT76 HMGN2P9-201ENST00000476875 229 ntBASIC0.82□□□□□ -2.28
UPK3BQ9BT76 AL163195.1-201ENST00000496941 348 ntBASIC0.82□□□□□ -2.28
UPK3BQ9BT76 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms