Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 AC068790.6-201ENST00000602558 258 ntBASIC0.26□□□□□ -2.37
LIMD2Q9BT23 AC064872.1-201ENST00000604823 1072 ntBASIC0.26□□□□□ -2.37
LIMD2Q9BT23 AL356157.2-201ENST00000605122 111 ntBASIC0.26□□□□□ -2.37
LIMD2Q9BT23 AC131235.4-201ENST00000609288 620 ntBASIC0.26□□□□□ -2.37
LIMD2Q9BT23 GHRLOS.1-201ENST00000610995 70 ntBASIC0.26□□□□□ -2.37
LIMD2Q9BT23 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.26□□□□□ -2.37
LIMD2Q9BT23 AC006386.1-201ENST00000619436 415 ntBASIC0.26□□□□□ -2.37
LIMD2Q9BT23 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.26□□□□□ -2.37
LIMD2Q9BT23 AC134026.1-201ENST00000623249 2239 ntBASIC0.26□□□□□ -2.37
LIMD2Q9BT23 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
LIMD2Q9BT23 Y_RNA.4-201ENST00000362333 112 ntBASIC0.25□□□□□ -2.37
LIMD2Q9BT23 Y_RNA.224-201ENST00000364308 111 ntBASIC0.25□□□□□ -2.37
LIMD2Q9BT23 RPS20P2-201ENST00000402520 389 ntBASIC0.25□□□□□ -2.37
LIMD2Q9BT23 RNA5SP111-201ENST00000411386 101 ntBASIC0.25□□□□□ -2.37
LIMD2Q9BT23 AC006366.1-201ENST00000422002 759 ntBASIC0.25□□□□□ -2.37
LIMD2Q9BT23 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
LIMD2Q9BT23 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.25□□□□□ -2.37
LIMD2Q9BT23 AL035398.1-201ENST00000430869 322 ntBASIC0.25□□□□□ -2.37
LIMD2Q9BT23 AL117351.1-201ENST00000438864 766 ntBASIC0.25□□□□□ -2.37
LIMD2Q9BT23 TAF9P1-201ENST00000445421 515 ntBASIC0.25□□□□□ -2.37
LIMD2Q9BT23 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.25□□□□□ -2.37
LIMD2Q9BT23 TAF9P2-201ENST00000454958 515 ntBASIC0.25□□□□□ -2.37
LIMD2Q9BT23 AL162395.1-201ENST00000457882 422 ntBASIC0.25□□□□□ -2.37
LIMD2Q9BT23 AC104982.1-201ENST00000478775 574 ntBASIC0.25□□□□□ -2.37
LIMD2Q9BT23 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
LIMD2Q9BT23 RNU6-1223P-201ENST00000517124 104 ntBASIC0.25□□□□□ -2.37
LIMD2Q9BT23 AC024995.1-201ENST00000523014 93 ntBASIC0.25□□□□□ -2.37
LIMD2Q9BT23 AC011979.2-201ENST00000527568 352 ntBASIC0.25□□□□□ -2.37
LIMD2Q9BT23 EIF4A1P12-201ENST00000551910 141 ntBASIC0.25□□□□□ -2.37
LIMD2Q9BT23 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.25□□□□□ -2.37
LIMD2Q9BT23 TPRKBP2-201ENST00000565969 475 ntBASIC0.25□□□□□ -2.37
LIMD2Q9BT23 MIR5695-201ENST00000579717 85 ntBASIC0.25□□□□□ -2.37
LIMD2Q9BT23 AC110760.3-201ENST00000598794 467 ntBASIC0.25□□□□□ -2.37
LIMD2Q9BT23 AC091965.4-201ENST00000607691 587 ntBASIC0.25□□□□□ -2.37
LIMD2Q9BT23 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.25□□□□□ -2.37
LIMD2Q9BT23 AL354696.1-201ENST00000614652 497 ntBASIC0.25□□□□□ -2.37
LIMD2Q9BT23 AC009509.4-201ENST00000619202 509 ntBASIC0.25□□□□□ -2.37
LIMD2Q9BT23 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.25□□□□□ -2.37
LIMD2Q9BT23 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.25□□□□□ -2.37
LIMD2Q9BT23 BX322639.1-202ENST00000423987 2213 ntBASIC0.25□□□□□ -2.37
LIMD2Q9BT23 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
LIMD2Q9BT23 AC092268.1-201ENST00000342691 405 ntBASIC0.24□□□□□ -2.37
LIMD2Q9BT23 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
LIMD2Q9BT23 Y_RNA.46-201ENST00000362695 102 ntBASIC0.24□□□□□ -2.37
LIMD2Q9BT23 RNU6-527P-201ENST00000363425 104 ntBASIC0.24□□□□□ -2.37
LIMD2Q9BT23 RNU6-105P-201ENST00000363909 104 ntBASIC0.24□□□□□ -2.37
LIMD2Q9BT23 RNU6-163P-201ENST00000384396 106 ntBASIC0.24□□□□□ -2.37
LIMD2Q9BT23 MIR10B-201ENST00000385011 110 ntBASIC0.24□□□□□ -2.37
LIMD2Q9BT23 MIR653-201ENST00000385279 96 ntBASIC0.24□□□□□ -2.37
LIMD2Q9BT23 MIR942-201ENST00000401111 86 ntBASIC0.24□□□□□ -2.37
LIMD2Q9BT23 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.24□□□□□ -2.37
LIMD2Q9BT23 AC092628.1-201ENST00000436250 252 ntBASIC0.24□□□□□ -2.37
LIMD2Q9BT23 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.24□□□□□ -2.37
LIMD2Q9BT23 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.24□□□□□ -2.37
LIMD2Q9BT23 AC007327.1-201ENST00000447461 264 ntBASIC0.24□□□□□ -2.37
LIMD2Q9BT23 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.24□□□□□ -2.37
LIMD2Q9BT23 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.24□□□□□ -2.37
LIMD2Q9BT23 AC105758.1-201ENST00000506038 399 ntBASIC0.24□□□□□ -2.37
LIMD2Q9BT23 AC010587.2-201ENST00000511727 448 ntBASIC0.24□□□□□ -2.37
LIMD2Q9BT23 RNU6-229P-201ENST00000516614 102 ntBASIC0.24□□□□□ -2.37
LIMD2Q9BT23 RNU6-1003P-201ENST00000517099 105 ntBASIC0.24□□□□□ -2.37
LIMD2Q9BT23 RNU6-201P-201ENST00000517100 61 ntBASIC0.24□□□□□ -2.37
LIMD2Q9BT23 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.24□□□□□ -2.37
LIMD2Q9BT23 LRRC6P1-201ENST00000532188 885 ntBASIC0.24□□□□□ -2.37
LIMD2Q9BT23 ADI1P3-201ENST00000549509 470 ntBASIC0.24□□□□□ -2.37
LIMD2Q9BT23 AC091489.2-201ENST00000566263 604 ntBASIC0.24□□□□□ -2.37
LIMD2Q9BT23 AP002360.4-201ENST00000606980 481 ntBASIC0.24□□□□□ -2.37
LIMD2Q9BT23 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.24□□□□□ -2.37
LIMD2Q9BT23 AC005520.5-201ENST00000613926 164 ntBASIC0.24□□□□□ -2.37
LIMD2Q9BT23 AC243829.3-201ENST00000622177 108 ntBASIC0.24□□□□□ -2.37
LIMD2Q9BT23 SNORD3E-202ENST00000627253 216 ntBASIC0.24□□□□□ -2.37
LIMD2Q9BT23 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.24□□□□□ -2.37
LIMD2Q9BT23 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
LIMD2Q9BT23 CASC19-280ENST00000642102 1351 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 AC073343.1-201ENST00000328239 651 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 Y_RNA.164-201ENST00000363709 102 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 RNU4-56P-201ENST00000364700 142 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 RNU4-12P-201ENST00000365233 139 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 RNU6-1-201ENST00000383898 107 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 RNU6-723P-201ENST00000383973 107 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 RNU6-413P-201ENST00000384115 107 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 RNU6-42P-201ENST00000384165 107 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 RNU6-36P-201ENST00000384172 107 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 RNU6-4P-201ENST00000384205 107 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 RNU6-5P-201ENST00000384238 107 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 RNU6-43P-201ENST00000384302 107 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 RNU6-3P-201ENST00000384314 107 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 RNU6-2-201ENST00000384627 107 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 RNU6-1031P-201ENST00000384773 107 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 RNU6-9-201ENST00000384776 107 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 RNU6-33P-201ENST00000384793 107 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 RPL21P1-201ENST00000399532 476 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 MIR548J-201ENST00000408833 112 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 RNU6-1245P-201ENST00000411130 106 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.23□□□□□ -2.37
LIMD2Q9BT23 AL590135.1-201ENST00000422215 156 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 AC019205.3-201ENST00000424573 156 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.23□□□□□ -2.37
LIMD2Q9BT23 AC244670.1-201ENST00000436879 112 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms