Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.51□□□□□ -2.17
HDHD3Q9BSH5 AC025465.4-201ENST00000513422 638 ntBASIC1.51□□□□□ -2.17
HDHD3Q9BSH5 RNU6-612P-201ENST00000516909 102 ntBASIC1.51□□□□□ -2.17
HDHD3Q9BSH5 AC104576.1-201ENST00000524225 88 ntBASIC1.51□□□□□ -2.17
HDHD3Q9BSH5 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.51□□□□□ -2.17
HDHD3Q9BSH5 AC024614.2-201ENST00000577584 372 ntBASIC1.51□□□□□ -2.17
HDHD3Q9BSH5 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.51□□□□□ -2.17
HDHD3Q9BSH5 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.51□□□□□ -2.17
HDHD3Q9BSH5 AC064859.1-201ENST00000624741 174 ntBASIC1.51□□□□□ -2.17
HDHD3Q9BSH5 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.51□□□□□ -2.17
HDHD3Q9BSH5 MIR3688-2-201ENST00000636963 87 ntBASIC1.51□□□□□ -2.17
HDHD3Q9BSH5 AC009487.4-201ENST00000624969 3585 ntBASIC1.5□□□□□ -2.17
HDHD3Q9BSH5 RNU5B-2P-201ENST00000363036 113 ntBASIC1.5□□□□□ -2.17
HDHD3Q9BSH5 RNU6-1164P-201ENST00000364428 107 ntBASIC1.5□□□□□ -2.17
HDHD3Q9BSH5 RNU6-1317P-201ENST00000364582 104 ntBASIC1.5□□□□□ -2.17
HDHD3Q9BSH5 MIR518A2-201ENST00000384966 87 ntBASIC1.5□□□□□ -2.17
HDHD3Q9BSH5 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
HDHD3Q9BSH5 AL139413.1-201ENST00000421309 217 ntBASIC1.5□□□□□ -2.17
HDHD3Q9BSH5 AL445685.2-201ENST00000422551 342 ntBASIC1.5□□□□□ -2.17
HDHD3Q9BSH5 UBE2V1P4-201ENST00000425374 344 ntBASIC1.5□□□□□ -2.17
HDHD3Q9BSH5 AL513185.2-201ENST00000425543 193 ntBASIC1.5□□□□□ -2.17
HDHD3Q9BSH5 RPL32P28-201ENST00000443577 397 ntBASIC1.5□□□□□ -2.17
HDHD3Q9BSH5 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.5□□□□□ -2.17
HDHD3Q9BSH5 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.5□□□□□ -2.17
HDHD3Q9BSH5 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.5□□□□□ -2.17
HDHD3Q9BSH5 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.5□□□□□ -2.17
HDHD3Q9BSH5 MTCYBP18-201ENST00000501056 747 ntBASIC1.5□□□□□ -2.17
HDHD3Q9BSH5 AC016632.1-201ENST00000503994 196 ntBASIC1.5□□□□□ -2.17
HDHD3Q9BSH5 RNU6-965P-201ENST00000516721 96 ntBASIC1.5□□□□□ -2.17
HDHD3Q9BSH5 MTND1P35-201ENST00000526739 508 ntBASIC1.5□□□□□ -2.17
HDHD3Q9BSH5 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.5□□□□□ -2.17
HDHD3Q9BSH5 MIR3126-201ENST00000577443 74 ntBASIC1.5□□□□□ -2.17
HDHD3Q9BSH5 AC007229.1-201ENST00000590455 412 ntBASIC1.5□□□□□ -2.17
HDHD3Q9BSH5 AL031274.2-201ENST00000599419 203 ntBASIC1.5□□□□□ -2.17
HDHD3Q9BSH5 AL096840.1-201ENST00000603287 93 ntBASIC1.5□□□□□ -2.17
HDHD3Q9BSH5 AC012493.3-201ENST00000604494 112 ntBASIC1.5□□□□□ -2.17
HDHD3Q9BSH5 PCGEM1.1-201ENST00000613431 131 ntBASIC1.5□□□□□ -2.17
HDHD3Q9BSH5 AL138726.1-201ENST00000614873 333 ntBASIC1.5□□□□□ -2.17
HDHD3Q9BSH5 AL590808.1-201ENST00000618696 141 ntBASIC1.5□□□□□ -2.17
HDHD3Q9BSH5 AC139792.2-201ENST00000624218 587 ntBASIC1.5□□□□□ -2.17
HDHD3Q9BSH5 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
HDHD3Q9BSH5 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
HDHD3Q9BSH5 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.49□□□□□ -2.17
HDHD3Q9BSH5 MIR340-201ENST00000362125 95 ntBASIC1.49□□□□□ -2.17
HDHD3Q9BSH5 RNU6-227P-201ENST00000362865 103 ntBASIC1.49□□□□□ -2.17
HDHD3Q9BSH5 RNA5SP363-201ENST00000365072 115 ntBASIC1.49□□□□□ -2.17
HDHD3Q9BSH5 RNU6-378P-201ENST00000384324 107 ntBASIC1.49□□□□□ -2.17
HDHD3Q9BSH5 MIR450B-201ENST00000401182 78 ntBASIC1.49□□□□□ -2.17
HDHD3Q9BSH5 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.49□□□□□ -2.17
HDHD3Q9BSH5 RNU4-26P-201ENST00000410270 107 ntBASIC1.49□□□□□ -2.17
HDHD3Q9BSH5 RNA5SP450-201ENST00000411206 102 ntBASIC1.49□□□□□ -2.17
HDHD3Q9BSH5 SRIP3-201ENST00000413200 219 ntBASIC1.49□□□□□ -2.17
HDHD3Q9BSH5 VN1R36P-201ENST00000414936 291 ntBASIC1.49□□□□□ -2.17
HDHD3Q9BSH5 AC096920.1-201ENST00000423991 241 ntBASIC1.49□□□□□ -2.17
HDHD3Q9BSH5 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.49□□□□□ -2.17
HDHD3Q9BSH5 MTCO3P18-201ENST00000440206 761 ntBASIC1.49□□□□□ -2.17
HDHD3Q9BSH5 AL137159.1-201ENST00000452808 512 ntBASIC1.49□□□□□ -2.17
HDHD3Q9BSH5 MTND1P11-201ENST00000456661 876 ntBASIC1.49□□□□□ -2.17
HDHD3Q9BSH5 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.49□□□□□ -2.17
HDHD3Q9BSH5 PTP4A1P4-201ENST00000512479 322 ntBASIC1.49□□□□□ -2.17
HDHD3Q9BSH5 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.49□□□□□ -2.17
HDHD3Q9BSH5 RNU6-1332P-201ENST00000516666 104 ntBASIC1.49□□□□□ -2.17
HDHD3Q9BSH5 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.49□□□□□ -2.17
HDHD3Q9BSH5 AC087441.2-201ENST00000529141 262 ntBASIC1.49□□□□□ -2.17
HDHD3Q9BSH5 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.49□□□□□ -2.17
HDHD3Q9BSH5 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.49□□□□□ -2.17
HDHD3Q9BSH5 MIR3672-201ENST00000584290 82 ntBASIC1.49□□□□□ -2.17
HDHD3Q9BSH5 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.49□□□□□ -2.17
HDHD3Q9BSH5 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.49□□□□□ -2.17
HDHD3Q9BSH5 Z98751.3-201ENST00000604447 521 ntBASIC1.49□□□□□ -2.17
HDHD3Q9BSH5 AC009994.1-201ENST00000606889 253 ntBASIC1.49□□□□□ -2.17
HDHD3Q9BSH5 AC090617.10-201ENST00000624308 134 ntBASIC1.49□□□□□ -2.17
HDHD3Q9BSH5 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
HDHD3Q9BSH5 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
HDHD3Q9BSH5 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
HDHD3Q9BSH5 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.48□□□□□ -2.17
HDHD3Q9BSH5 Y_RNA.373-201ENST00000365600 103 ntBASIC1.48□□□□□ -2.17
HDHD3Q9BSH5 Y_RNA.530-201ENST00000384587 101 ntBASIC1.48□□□□□ -2.17
HDHD3Q9BSH5 MIR9-3-201ENST00000385084 90 ntBASIC1.48□□□□□ -2.17
HDHD3Q9BSH5 RNU6-325P-201ENST00000411132 105 ntBASIC1.48□□□□□ -2.17
HDHD3Q9BSH5 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.48□□□□□ -2.17
HDHD3Q9BSH5 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.48□□□□□ -2.17
HDHD3Q9BSH5 AL645568.3-201ENST00000433683 316 ntBASIC1.48□□□□□ -2.17
HDHD3Q9BSH5 UBE2V1P8-201ENST00000437166 265 ntBASIC1.48□□□□□ -2.17
HDHD3Q9BSH5 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.48□□□□□ -2.17
HDHD3Q9BSH5 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.48□□□□□ -2.17
HDHD3Q9BSH5 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.48□□□□□ -2.17
HDHD3Q9BSH5 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.48□□□□□ -2.17
HDHD3Q9BSH5 RPL9P9-202ENST00000466501 579 ntBASIC1.48□□□□□ -2.17
HDHD3Q9BSH5 AC107032.1-201ENST00000485945 480 ntBASIC1.48□□□□□ -2.17
HDHD3Q9BSH5 RNU2-44P-201ENST00000516795 194 ntBASIC1.48□□□□□ -2.17
HDHD3Q9BSH5 AC016256.1-201ENST00000547971 354 ntBASIC1.48□□□□□ -2.17
HDHD3Q9BSH5 AC110588.1-201ENST00000559699 137 ntBASIC1.48□□□□□ -2.17
HDHD3Q9BSH5 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.48□□□□□ -2.17
HDHD3Q9BSH5 MIR3618-201ENST00000580330 88 ntBASIC1.48□□□□□ -2.17
HDHD3Q9BSH5 AL670379.2-201ENST00000604983 252 ntBASIC1.48□□□□□ -2.17
HDHD3Q9BSH5 AL133215.3-201ENST00000609801 448 ntBASIC1.48□□□□□ -2.17
HDHD3Q9BSH5 AL627230.6-201ENST00000611129 280 ntBASIC1.48□□□□□ -2.17
HDHD3Q9BSH5 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.48□□□□□ -2.17
HDHD3Q9BSH5 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms