Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.78□□□□□ -1.96
PAAF1Q9BRP4 AC010329.5-201ENST00000623497 2174 ntBASIC2.78□□□□□ -1.96
PAAF1Q9BRP4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.78□□□□□ -1.96
PAAF1Q9BRP4 Y_RNA.314-201ENST00000365114 102 ntBASIC2.77□□□□□ -1.97
PAAF1Q9BRP4 Y_RNA.463-201ENST00000384271 102 ntBASIC2.77□□□□□ -1.97
PAAF1Q9BRP4 MIR32-201ENST00000384965 70 ntBASIC2.77□□□□□ -1.97
PAAF1Q9BRP4 MIR559-201ENST00000385188 96 ntBASIC2.77□□□□□ -1.97
PAAF1Q9BRP4 MIR548P-201ENST00000408336 84 ntBASIC2.77□□□□□ -1.97
PAAF1Q9BRP4 AL590556.1-201ENST00000423231 483 ntBASIC2.77□□□□□ -1.97
PAAF1Q9BRP4 EIF4EP4-201ENST00000424916 578 ntBASIC2.77□□□□□ -1.97
PAAF1Q9BRP4 snoU13.30-201ENST00000458951 104 ntBASIC2.77□□□□□ -1.97
PAAF1Q9BRP4 Y_RNA.639-201ENST00000458981 102 ntBASIC2.77□□□□□ -1.97
PAAF1Q9BRP4 snoU13.14-201ENST00000459372 104 ntBASIC2.77□□□□□ -1.97
PAAF1Q9BRP4 AC103975.1-201ENST00000482506 483 ntBASIC2.77□□□□□ -1.97
PAAF1Q9BRP4 HMGB1P35-201ENST00000503360 598 ntBASIC2.77□□□□□ -1.97
PAAF1Q9BRP4 Y_RNA.706-201ENST00000516933 99 ntBASIC2.77□□□□□ -1.97
PAAF1Q9BRP4 SNORD116.3-201ENST00000517176 78 ntBASIC2.77□□□□□ -1.97
PAAF1Q9BRP4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.77□□□□□ -1.97
PAAF1Q9BRP4 AC004584.2-201ENST00000570407 410 ntBASIC2.77□□□□□ -1.97
PAAF1Q9BRP4 MIR3945-201ENST00000581853 98 ntBASIC2.77□□□□□ -1.97
PAAF1Q9BRP4 RPL30P11-203ENST00000598995 310 ntBASIC2.77□□□□□ -1.97
PAAF1Q9BRP4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.77□□□□□ -1.97
PAAF1Q9BRP4 AC090517.3-201ENST00000625170 141 ntBASIC2.77□□□□□ -1.97
PAAF1Q9BRP4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.77□□□□□ -1.97
PAAF1Q9BRP4 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PAAF1Q9BRP4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.77□□□□□ -1.97
PAAF1Q9BRP4 MTND5P27-201ENST00000428871 1720 ntBASIC2.76□□□□□ -1.97
PAAF1Q9BRP4 FAM35CP-201ENST00000554755 2470 ntBASIC2.76□□□□□ -1.97
PAAF1Q9BRP4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
PAAF1Q9BRP4 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PAAF1Q9BRP4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
PAAF1Q9BRP4 RNA5SP289-201ENST00000362332 137 ntBASIC2.76□□□□□ -1.97
PAAF1Q9BRP4 SNORA63-201ENST00000363450 132 ntBASIC2.76□□□□□ -1.97
PAAF1Q9BRP4 MIR518C-201ENST00000384822 101 ntBASIC2.76□□□□□ -1.97
PAAF1Q9BRP4 MIR625-201ENST00000385047 85 ntBASIC2.76□□□□□ -1.97
PAAF1Q9BRP4 RNU6-1156P-201ENST00000410365 100 ntBASIC2.76□□□□□ -1.97
PAAF1Q9BRP4 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.76□□□□□ -1.97
PAAF1Q9BRP4 AL358453.1-201ENST00000422522 250 ntBASIC2.76□□□□□ -1.97
PAAF1Q9BRP4 AC012306.1-201ENST00000423267 114 ntBASIC2.76□□□□□ -1.97
PAAF1Q9BRP4 AC099799.1-201ENST00000439809 192 ntBASIC2.76□□□□□ -1.97
PAAF1Q9BRP4 AL121594.1-201ENST00000475906 575 ntBASIC2.76□□□□□ -1.97
PAAF1Q9BRP4 RN7SKP282-201ENST00000516824 299 ntBASIC2.76□□□□□ -1.97
PAAF1Q9BRP4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.76□□□□□ -1.97
PAAF1Q9BRP4 SUB1P3-201ENST00000564581 315 ntBASIC2.76□□□□□ -1.97
PAAF1Q9BRP4 MIR5571-201ENST00000577998 113 ntBASIC2.76□□□□□ -1.97
PAAF1Q9BRP4 MIR3923-201ENST00000579521 83 ntBASIC2.76□□□□□ -1.97
PAAF1Q9BRP4 Z98751.3-201ENST00000604447 521 ntBASIC2.76□□□□□ -1.97
PAAF1Q9BRP4 AL034555.1-201ENST00000604816 211 ntBASIC2.76□□□□□ -1.97
PAAF1Q9BRP4 AC100812.1-201ENST00000607622 580 ntBASIC2.76□□□□□ -1.97
PAAF1Q9BRP4 AC137590.2-201ENST00000619709 240 ntBASIC2.76□□□□□ -1.97
PAAF1Q9BRP4 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.76□□□□□ -1.97
PAAF1Q9BRP4 SCARNA4-201ENST00000629045 128 ntBASIC2.76□□□□□ -1.97
PAAF1Q9BRP4 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.76□□□□□ -1.97
PAAF1Q9BRP4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
PAAF1Q9BRP4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 snoU2_19.1-201ENST00000362361 80 ntBASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 RNU6-1115P-201ENST00000362490 106 ntBASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 Y_RNA.405-201ENST00000383979 100 ntBASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 RNU6-1227P-201ENST00000383981 107 ntBASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 Y_RNA.451-201ENST00000384200 100 ntBASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 RNU6-474P-201ENST00000384243 107 ntBASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 Y_RNA.524-201ENST00000384564 100 ntBASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 Y_RNA.561-201ENST00000384694 100 ntBASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 RNU6-541P-201ENST00000384709 110 ntBASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 Y_RNA.577-201ENST00000384794 101 ntBASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 RNU6-308P-201ENST00000390957 107 ntBASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 SNORA12.2-201ENST00000391040 156 ntBASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 CBX3P9-201ENST00000402326 552 ntBASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 AL590004.2-201ENST00000404787 371 ntBASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 MTCYBP2-201ENST00000407745 171 ntBASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 RNU6-1328P-201ENST00000410938 106 ntBASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 AC008267.5-201ENST00000424928 265 ntBASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 MTCO3P29-201ENST00000432119 779 ntBASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 Z82188.1-201ENST00000436709 154 ntBASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 snoU13.6-201ENST00000458785 104 ntBASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 RNU7-87P-201ENST00000459343 62 ntBASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 RPL30P10-201ENST00000488148 337 ntBASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 CKS1BP2-201ENST00000497342 240 ntBASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 AC105758.1-201ENST00000506038 399 ntBASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 AC008413.1-201ENST00000511864 177 ntBASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 AL442663.2-201ENST00000554385 511 ntBASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 MIR4435-1-201ENST00000582552 80 ntBASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 AC069294.1-201ENST00000608397 350 ntBASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 MIR1244-1-201ENST00000612829 85 ntBASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 uc_338.22-201ENST00000622722 187 ntBASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 MIR1244-3-201ENST00000635744 85 ntBASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 MIR1244-2-201ENST00000636449 85 ntBASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 MIR1244-4-202ENST00000636813 85 ntBASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 AC080128.1-201ENST00000474389 1917 ntBASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
PAAF1Q9BRP4 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms