Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 AC090517.1-201ENST00000569307 266 ntBASIC2.75□□□□□ -1.97
MEIS3Q99687 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.75□□□□□ -1.97
MEIS3Q99687 AC008121.1-201ENST00000603244 268 ntBASIC2.75□□□□□ -1.97
MEIS3Q99687 AL442067.1-201ENST00000613261 223 ntBASIC2.75□□□□□ -1.97
MEIS3Q99687 AL161629.2-201ENST00000615347 275 ntBASIC2.75□□□□□ -1.97
MEIS3Q99687 AC078938.1-201ENST00000620993 318 ntBASIC2.75□□□□□ -1.97
MEIS3Q99687 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.75□□□□□ -1.97
MEIS3Q99687 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
MEIS3Q99687 AL136164.4-201ENST00000625013 2135 ntBASIC2.75□□□□□ -1.97
MEIS3Q99687 FAM35CP-201ENST00000554755 2470 ntBASIC2.75□□□□□ -1.97
MEIS3Q99687 SDAD1P2-201ENST00000441308 2028 ntBASIC2.75□□□□□ -1.97
MEIS3Q99687 AC091152.2-201ENST00000591628 2569 ntBASIC2.74□□□□□ -1.97
MEIS3Q99687 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
MEIS3Q99687 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.74□□□□□ -1.97
MEIS3Q99687 Y_RNA.105-201ENST00000363182 111 ntBASIC2.74□□□□□ -1.97
MEIS3Q99687 RNU1-91P-201ENST00000364746 163 ntBASIC2.74□□□□□ -1.97
MEIS3Q99687 Y_RNA.476-201ENST00000384347 108 ntBASIC2.74□□□□□ -1.97
MEIS3Q99687 SNORA51.11-201ENST00000384442 131 ntBASIC2.74□□□□□ -1.97
MEIS3Q99687 AL023284.1-201ENST00000403956 276 ntBASIC2.74□□□□□ -1.97
MEIS3Q99687 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.74□□□□□ -1.97
MEIS3Q99687 Y_RNA.618-201ENST00000410949 107 ntBASIC2.74□□□□□ -1.97
MEIS3Q99687 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.74□□□□□ -1.97
MEIS3Q99687 AL117339.3-201ENST00000418733 162 ntBASIC2.74□□□□□ -1.97
MEIS3Q99687 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.74□□□□□ -1.97
MEIS3Q99687 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.74□□□□□ -1.97
MEIS3Q99687 AL160314.1-201ENST00000490836 438 ntBASIC2.74□□□□□ -1.97
MEIS3Q99687 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.74□□□□□ -1.97
MEIS3Q99687 ANXA2P1-201ENST00000505539 926 ntBASIC2.74□□□□□ -1.97
MEIS3Q99687 AK3P2-201ENST00000507976 429 ntBASIC2.74□□□□□ -1.97
MEIS3Q99687 AL359273.1-201ENST00000510918 627 ntBASIC2.74□□□□□ -1.97
MEIS3Q99687 RNU6-1143P-201ENST00000516125 104 ntBASIC2.74□□□□□ -1.97
MEIS3Q99687 RNU6-572P-201ENST00000516724 80 ntBASIC2.74□□□□□ -1.97
MEIS3Q99687 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.74□□□□□ -1.97
MEIS3Q99687 AC004584.2-201ENST00000570407 410 ntBASIC2.74□□□□□ -1.97
MEIS3Q99687 AC005357.1-201ENST00000588399 301 ntBASIC2.74□□□□□ -1.97
MEIS3Q99687 AC125232.2-201ENST00000592457 143 ntBASIC2.74□□□□□ -1.97
MEIS3Q99687 AL355297.3-201ENST00000604082 446 ntBASIC2.74□□□□□ -1.97
MEIS3Q99687 AC004805.2-201ENST00000605382 482 ntBASIC2.74□□□□□ -1.97
MEIS3Q99687 AL021879.1-201ENST00000611756 288 ntBASIC2.74□□□□□ -1.97
MEIS3Q99687 AC097372.5-201ENST00000623665 376 ntBASIC2.74□□□□□ -1.97
MEIS3Q99687 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.74□□□□□ -1.97
MEIS3Q99687 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
MEIS3Q99687 MIR412-201ENST00000362142 91 ntBASIC2.73□□□□□ -1.97
MEIS3Q99687 SNORD50.1-201ENST00000362987 71 ntBASIC2.73□□□□□ -1.97
MEIS3Q99687 RNU6-596P-201ENST00000365395 98 ntBASIC2.73□□□□□ -1.97
MEIS3Q99687 Y_RNA.447-201ENST00000384184 113 ntBASIC2.73□□□□□ -1.97
MEIS3Q99687 Y_RNA.477-201ENST00000384352 108 ntBASIC2.73□□□□□ -1.97
MEIS3Q99687 RNU6-166P-201ENST00000384371 107 ntBASIC2.73□□□□□ -1.97
MEIS3Q99687 MIR493-201ENST00000385254 89 ntBASIC2.73□□□□□ -1.97
MEIS3Q99687 MT-TG-201ENST00000387429 68 ntBASIC2.73□□□□□ -1.97
MEIS3Q99687 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
MEIS3Q99687 SNORA40C-201ENST00000391285 128 ntBASIC2.73□□□□□ -1.97
MEIS3Q99687 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
MEIS3Q99687 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.73□□□□□ -1.97
MEIS3Q99687 RNU2-33P-201ENST00000410344 192 ntBASIC2.73□□□□□ -1.97
MEIS3Q99687 NDUFB4P7-201ENST00000423198 363 ntBASIC2.73□□□□□ -1.97
MEIS3Q99687 AC104332.2-201ENST00000429959 156 ntBASIC2.73□□□□□ -1.97
MEIS3Q99687 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.73□□□□□ -1.97
MEIS3Q99687 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.73□□□□□ -1.97
MEIS3Q99687 OSTCP8-201ENST00000445117 448 ntBASIC2.73□□□□□ -1.97
MEIS3Q99687 RNU6-1037P-201ENST00000459571 107 ntBASIC2.73□□□□□ -1.97
MEIS3Q99687 MTND1P19-201ENST00000511780 315 ntBASIC2.73□□□□□ -1.97
MEIS3Q99687 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.73□□□□□ -1.97
MEIS3Q99687 RNU6-475P-201ENST00000516073 104 ntBASIC2.73□□□□□ -1.97
MEIS3Q99687 RNY3P15-201ENST00000516297 97 ntBASIC2.73□□□□□ -1.97
MEIS3Q99687 SCARNA16.3-201ENST00000516595 184 ntBASIC2.73□□□□□ -1.97
MEIS3Q99687 AC022616.4-201ENST00000522985 181 ntBASIC2.73□□□□□ -1.97
MEIS3Q99687 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.73□□□□□ -1.97
MEIS3Q99687 ATP5F1P5-201ENST00000526403 760 ntBASIC2.73□□□□□ -1.97
MEIS3Q99687 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
MEIS3Q99687 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.73□□□□□ -1.97
MEIS3Q99687 AC100812.1-201ENST00000607622 580 ntBASIC2.73□□□□□ -1.97
MEIS3Q99687 AC062037.2-201ENST00000610137 73 ntBASIC2.73□□□□□ -1.97
MEIS3Q99687 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
MEIS3Q99687 AL110115.1-201ENST00000614396 364 ntBASIC2.73□□□□□ -1.97
MEIS3Q99687 MIR8062-201ENST00000621515 85 ntBASIC2.73□□□□□ -1.97
MEIS3Q99687 AC007256.1-201ENST00000392253 2765 ntBASIC2.73□□□□□ -1.97
MEIS3Q99687 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
MEIS3Q99687 AC233263.6-201ENST00000631132 1963 ntBASIC2.72□□□□□ -1.97
MEIS3Q99687 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.72□□□□□ -1.97
MEIS3Q99687 ZNF720P1-201ENST00000562403 1939 ntBASIC2.72□□□□□ -1.97
MEIS3Q99687 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.72□□□□□ -1.97
MEIS3Q99687 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
MEIS3Q99687 Y_RNA.461-201ENST00000384263 103 ntBASIC2.72□□□□□ -1.97
MEIS3Q99687 RNU6-1026P-201ENST00000384465 108 ntBASIC2.72□□□□□ -1.97
MEIS3Q99687 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
MEIS3Q99687 RNU2-38P-201ENST00000410856 79 ntBASIC2.72□□□□□ -1.97
MEIS3Q99687 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.72□□□□□ -1.97
MEIS3Q99687 SSXP4-201ENST00000451349 245 ntBASIC2.72□□□□□ -1.97
MEIS3Q99687 MTCO3P8-201ENST00000453691 755 ntBASIC2.72□□□□□ -1.97
MEIS3Q99687 AC092798.1-201ENST00000458542 409 ntBASIC2.72□□□□□ -1.97
MEIS3Q99687 RPS20P22-201ENST00000473700 357 ntBASIC2.72□□□□□ -1.97
MEIS3Q99687 RNA5SP200-201ENST00000516360 103 ntBASIC2.72□□□□□ -1.97
MEIS3Q99687 RNU6-570P-201ENST00000517051 105 ntBASIC2.72□□□□□ -1.97
MEIS3Q99687 AP005902.1-201ENST00000521358 186 ntBASIC2.72□□□□□ -1.97
MEIS3Q99687 MIR5002-201ENST00000584713 97 ntBASIC2.72□□□□□ -1.97
MEIS3Q99687 AP002826.1-201ENST00000608835 315 ntBASIC2.72□□□□□ -1.97
MEIS3Q99687 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
MEIS3Q99687 MTND5P9-201ENST00000503854 1755 ntBASIC2.72□□□□□ -1.97
MEIS3Q99687 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms