Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.42□□□□□ -2.34
LYSMD1Q96S90 HMGN1P30-201ENST00000589286 268 ntBASIC0.42□□□□□ -2.34
LYSMD1Q96S90 RNU6-88P-201ENST00000606801 100 ntBASIC0.42□□□□□ -2.34
LYSMD1Q96S90 AC009229.3-201ENST00000608056 282 ntBASIC0.42□□□□□ -2.34
LYSMD1Q96S90 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
LYSMD1Q96S90 RMST_7.1-201ENST00000621935 268 ntBASIC0.42□□□□□ -2.34
LYSMD1Q96S90 AC126544.2-201ENST00000625174 749 ntBASIC0.42□□□□□ -2.34
LYSMD1Q96S90 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
LYSMD1Q96S90 Y_RNA.118-201ENST00000363300 101 ntBASIC0.41□□□□□ -2.34
LYSMD1Q96S90 SNORD18A-201ENST00000363753 72 ntBASIC0.41□□□□□ -2.34
LYSMD1Q96S90 RNU6-960P-201ENST00000364056 120 ntBASIC0.41□□□□□ -2.34
LYSMD1Q96S90 SNORD31B-201ENST00000364977 69 ntBASIC0.41□□□□□ -2.34
LYSMD1Q96S90 RNU5E-7P-201ENST00000365290 117 ntBASIC0.41□□□□□ -2.34
LYSMD1Q96S90 MIR598-201ENST00000384868 97 ntBASIC0.41□□□□□ -2.34
LYSMD1Q96S90 MIR489-201ENST00000384923 84 ntBASIC0.41□□□□□ -2.34
LYSMD1Q96S90 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.41□□□□□ -2.34
LYSMD1Q96S90 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.41□□□□□ -2.34
LYSMD1Q96S90 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.41□□□□□ -2.34
LYSMD1Q96S90 MTCYBP39-201ENST00000437562 491 ntBASIC0.41□□□□□ -2.34
LYSMD1Q96S90 AC007395.1-201ENST00000451333 677 ntBASIC0.41□□□□□ -2.34
LYSMD1Q96S90 MTCYBP1-201ENST00000454315 1119 ntBASIC0.41□□□□□ -2.34
LYSMD1Q96S90 RNU7-14P-201ENST00000459331 62 ntBASIC0.41□□□□□ -2.34
LYSMD1Q96S90 AC010531.2-201ENST00000465012 153 ntBASIC0.41□□□□□ -2.34
LYSMD1Q96S90 AC092991.1-201ENST00000477176 376 ntBASIC0.41□□□□□ -2.34
LYSMD1Q96S90 AC048334.1-201ENST00000477975 159 ntBASIC0.41□□□□□ -2.34
LYSMD1Q96S90 AL163973.1-201ENST00000484753 577 ntBASIC0.41□□□□□ -2.34
LYSMD1Q96S90 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.41□□□□□ -2.34
LYSMD1Q96S90 SNORD79.1-201ENST00000516069 84 ntBASIC0.41□□□□□ -2.34
LYSMD1Q96S90 RNU1-86P-201ENST00000516108 154 ntBASIC0.41□□□□□ -2.34
LYSMD1Q96S90 RNU6-123P-201ENST00000516163 102 ntBASIC0.41□□□□□ -2.34
LYSMD1Q96S90 RNU1-107P-201ENST00000516617 154 ntBASIC0.41□□□□□ -2.34
LYSMD1Q96S90 AC087883.1-201ENST00000551882 391 ntBASIC0.41□□□□□ -2.34
LYSMD1Q96S90 MIR3136-201ENST00000583498 78 ntBASIC0.41□□□□□ -2.34
LYSMD1Q96S90 AC012507.3-201ENST00000603556 477 ntBASIC0.41□□□□□ -2.34
LYSMD1Q96S90 AC092106.3-201ENST00000611308 722 ntBASIC0.41□□□□□ -2.34
LYSMD1Q96S90 AC126177.8-201ENST00000618339 1015 ntBASIC0.41□□□□□ -2.34
LYSMD1Q96S90 AC243829.3-201ENST00000622177 108 ntBASIC0.41□□□□□ -2.34
LYSMD1Q96S90 AC099786.3-201ENST00000565735 1410 ntBASIC0.4□□□□□ -2.34
LYSMD1Q96S90 Y_RNA.46-201ENST00000362695 102 ntBASIC0.4□□□□□ -2.35
LYSMD1Q96S90 RNU6-16P-201ENST00000384385 107 ntBASIC0.4□□□□□ -2.35
LYSMD1Q96S90 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
LYSMD1Q96S90 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.4□□□□□ -2.35
LYSMD1Q96S90 RNU6-1054P-201ENST00000411293 104 ntBASIC0.4□□□□□ -2.35
LYSMD1Q96S90 RNA5SP111-201ENST00000411386 101 ntBASIC0.4□□□□□ -2.35
LYSMD1Q96S90 AC016925.1-201ENST00000458303 298 ntBASIC0.4□□□□□ -2.35
LYSMD1Q96S90 AC010587.2-201ENST00000511727 448 ntBASIC0.4□□□□□ -2.35
LYSMD1Q96S90 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
LYSMD1Q96S90 RNU4-57P-201ENST00000515980 135 ntBASIC0.4□□□□□ -2.35
LYSMD1Q96S90 RNU2-10P-201ENST00000516375 211 ntBASIC0.4□□□□□ -2.35
LYSMD1Q96S90 RNU5F-4P-201ENST00000516581 114 ntBASIC0.4□□□□□ -2.35
LYSMD1Q96S90 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.4□□□□□ -2.35
LYSMD1Q96S90 MTND2P7-201ENST00000521337 640 ntBASIC0.4□□□□□ -2.35
LYSMD1Q96S90 AP001893.2-201ENST00000526949 202 ntBASIC0.4□□□□□ -2.35
LYSMD1Q96S90 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.4□□□□□ -2.35
LYSMD1Q96S90 ADI1P3-201ENST00000549509 470 ntBASIC0.4□□□□□ -2.35
LYSMD1Q96S90 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.4□□□□□ -2.35
LYSMD1Q96S90 MTND4LP25-201ENST00000570218 163 ntBASIC0.4□□□□□ -2.35
LYSMD1Q96S90 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.4□□□□□ -2.35
LYSMD1Q96S90 AC008147.4-201ENST00000617570 1204 ntBASIC0.4□□□□□ -2.35
LYSMD1Q96S90 MIR5087-201ENST00000635826 76 ntBASIC0.4□□□□□ -2.35
LYSMD1Q96S90 AC106858.1-201ENST00000637497 429 ntBASIC0.4□□□□□ -2.35
LYSMD1Q96S90 AL445523.1-201ENST00000451184 1362 ntBASIC0.4□□□□□ -2.35
LYSMD1Q96S90 RNU6-534P-201ENST00000364877 106 ntBASIC0.39□□□□□ -2.35
LYSMD1Q96S90 RNU4-12P-201ENST00000365233 139 ntBASIC0.39□□□□□ -2.35
LYSMD1Q96S90 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
LYSMD1Q96S90 RNU6-877P-201ENST00000383868 107 ntBASIC0.39□□□□□ -2.35
LYSMD1Q96S90 RNU6-1026P-201ENST00000384465 108 ntBASIC0.39□□□□□ -2.35
LYSMD1Q96S90 MTCYBP2-201ENST00000407745 171 ntBASIC0.39□□□□□ -2.35
LYSMD1Q96S90 RNU6-1245P-201ENST00000411130 106 ntBASIC0.39□□□□□ -2.35
LYSMD1Q96S90 AL590135.1-201ENST00000422215 156 ntBASIC0.39□□□□□ -2.35
LYSMD1Q96S90 AC019205.3-201ENST00000424573 156 ntBASIC0.39□□□□□ -2.35
LYSMD1Q96S90 CETN4P-201ENST00000432407 469 ntBASIC0.39□□□□□ -2.35
LYSMD1Q96S90 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.39□□□□□ -2.35
LYSMD1Q96S90 AC016700.2-201ENST00000446011 156 ntBASIC0.39□□□□□ -2.35
LYSMD1Q96S90 AL360271.2-201ENST00000447710 161 ntBASIC0.39□□□□□ -2.35
LYSMD1Q96S90 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.39□□□□□ -2.35
LYSMD1Q96S90 AC015911.1-201ENST00000495111 156 ntBASIC0.39□□□□□ -2.35
LYSMD1Q96S90 AC104806.1-201ENST00000508720 308 ntBASIC0.39□□□□□ -2.35
LYSMD1Q96S90 RNA5SP255-201ENST00000516370 107 ntBASIC0.39□□□□□ -2.35
LYSMD1Q96S90 RNU6-1098P-201ENST00000516772 96 ntBASIC0.39□□□□□ -2.35
LYSMD1Q96S90 AL353149.1-201ENST00000610667 244 ntBASIC0.39□□□□□ -2.35
LYSMD1Q96S90 AC012409.4-201ENST00000612923 249 ntBASIC0.39□□□□□ -2.35
LYSMD1Q96S90 AL589743.1-201ENST00000551932 2712 ntBASIC0.38□□□□□ -2.35
LYSMD1Q96S90 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
LYSMD1Q96S90 SNORA72.2-201ENST00000365028 127 ntBASIC0.38□□□□□ -2.35
LYSMD1Q96S90 Y_RNA.465-201ENST00000384293 102 ntBASIC0.38□□□□□ -2.35
LYSMD1Q96S90 RNU6-298P-201ENST00000390888 96 ntBASIC0.38□□□□□ -2.35
LYSMD1Q96S90 AC019070.1-201ENST00000415008 1024 ntBASIC0.38□□□□□ -2.35
LYSMD1Q96S90 AC006366.1-201ENST00000422002 759 ntBASIC0.38□□□□□ -2.35
LYSMD1Q96S90 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.38□□□□□ -2.35
LYSMD1Q96S90 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.38□□□□□ -2.35
LYSMD1Q96S90 AC245047.7-201ENST00000440265 293 ntBASIC0.38□□□□□ -2.35
LYSMD1Q96S90 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.38□□□□□ -2.35
LYSMD1Q96S90 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.38□□□□□ -2.35
LYSMD1Q96S90 AC091435.1-201ENST00000505442 584 ntBASIC0.38□□□□□ -2.35
LYSMD1Q96S90 RNU7-51P-201ENST00000516560 62 ntBASIC0.38□□□□□ -2.35
LYSMD1Q96S90 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.38□□□□□ -2.35
LYSMD1Q96S90 AC068587.4-201ENST00000533893 186 ntBASIC0.38□□□□□ -2.35
LYSMD1Q96S90 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.38□□□□□ -2.35
LYSMD1Q96S90 AC091489.2-201ENST00000566263 604 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 179.2 ms