Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AL441985.1-201ENST00000457727 251 ntBASIC1.42□□□□□ -2.18
LINC00477Q96M19 snoU13.14-201ENST00000459372 104 ntBASIC1.42□□□□□ -2.18
LINC00477Q96M19 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.42□□□□□ -2.18
LINC00477Q96M19 UBE2DNL-203ENST00000474922 222 ntBASIC1.42□□□□□ -2.18
LINC00477Q96M19 MTCO2P30-201ENST00000503662 364 ntBASIC1.42□□□□□ -2.18
LINC00477Q96M19 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.42□□□□□ -2.18
LINC00477Q96M19 AC107393.1-201ENST00000512403 346 ntBASIC1.42□□□□□ -2.18
LINC00477Q96M19 RNU6-1314P-201ENST00000517139 104 ntBASIC1.42□□□□□ -2.18
LINC00477Q96M19 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.42□□□□□ -2.18
LINC00477Q96M19 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.42□□□□□ -2.18
LINC00477Q96M19 CYCSP27-201ENST00000527643 293 ntBASIC1.42□□□□□ -2.18
LINC00477Q96M19 AP000763.2-201ENST00000540641 163 ntBASIC1.42□□□□□ -2.18
LINC00477Q96M19 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.42□□□□□ -2.18
LINC00477Q96M19 IMMP1LP2-201ENST00000552954 492 ntBASIC1.42□□□□□ -2.18
LINC00477Q96M19 AC091135.1-201ENST00000585943 307 ntBASIC1.42□□□□□ -2.18
LINC00477Q96M19 AL031274.2-201ENST00000599419 203 ntBASIC1.42□□□□□ -2.18
LINC00477Q96M19 AC078795.3-201ENST00000602913 472 ntBASIC1.42□□□□□ -2.18
LINC00477Q96M19 AP001836.1-201ENST00000604675 523 ntBASIC1.42□□□□□ -2.18
LINC00477Q96M19 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
LINC00477Q96M19 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.42□□□□□ -2.18
LINC00477Q96M19 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.42□□□□□ -2.18
LINC00477Q96M19 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.42□□□□□ -2.18
LINC00477Q96M19 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.42□□□□□ -2.18
LINC00477Q96M19 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
LINC00477Q96M19 HAUS6P2-201ENST00000433254 2404 ntBASIC1.41□□□□□ -2.18
LINC00477Q96M19 Y_RNA.151-201ENST00000363566 112 ntBASIC1.41□□□□□ -2.18
LINC00477Q96M19 SNORD113-7-201ENST00000363762 77 ntBASIC1.41□□□□□ -2.18
LINC00477Q96M19 SNORA16.1-201ENST00000364597 132 ntBASIC1.41□□□□□ -2.18
LINC00477Q96M19 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
LINC00477Q96M19 RNU6-95P-201ENST00000384697 107 ntBASIC1.41□□□□□ -2.18
LINC00477Q96M19 EIF4E2P1-201ENST00000393781 255 ntBASIC1.41□□□□□ -2.18
LINC00477Q96M19 RNA5SP390-201ENST00000410191 113 ntBASIC1.41□□□□□ -2.18
LINC00477Q96M19 VN1R36P-201ENST00000414936 291 ntBASIC1.41□□□□□ -2.18
LINC00477Q96M19 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.41□□□□□ -2.18
LINC00477Q96M19 RPL23AP95-201ENST00000426806 265 ntBASIC1.41□□□□□ -2.18
LINC00477Q96M19 AL591043.1-201ENST00000432461 424 ntBASIC1.41□□□□□ -2.18
LINC00477Q96M19 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
LINC00477Q96M19 RPL32P28-201ENST00000443577 397 ntBASIC1.41□□□□□ -2.18
LINC00477Q96M19 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.41□□□□□ -2.18
LINC00477Q96M19 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.41□□□□□ -2.18
LINC00477Q96M19 CKS1BP2-201ENST00000497342 240 ntBASIC1.41□□□□□ -2.18
LINC00477Q96M19 TRBVA-201ENST00000498804 316 ntBASIC1.41□□□□□ -2.18
LINC00477Q96M19 HMGB1P35-201ENST00000503360 598 ntBASIC1.41□□□□□ -2.18
LINC00477Q96M19 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.41□□□□□ -2.18
LINC00477Q96M19 SNORA4.4-201ENST00000515921 135 ntBASIC1.41□□□□□ -2.18
LINC00477Q96M19 MIR3122-201ENST00000577243 73 ntBASIC1.41□□□□□ -2.18
LINC00477Q96M19 MIR3976-201ENST00000606807 139 ntBASIC1.41□□□□□ -2.18
LINC00477Q96M19 AL138726.1-201ENST00000614873 333 ntBASIC1.41□□□□□ -2.18
LINC00477Q96M19 U4.5-201ENST00000617137 123 ntBASIC1.41□□□□□ -2.18
LINC00477Q96M19 AL590808.1-201ENST00000618696 141 ntBASIC1.41□□□□□ -2.18
LINC00477Q96M19 AC090517.3-201ENST00000625170 141 ntBASIC1.41□□□□□ -2.18
LINC00477Q96M19 MIR1248-201ENST00000629190 106 ntBASIC1.41□□□□□ -2.18
LINC00477Q96M19 MTND4P23-201ENST00000447723 1363 ntBASIC1.41□□□□□ -2.18
LINC00477Q96M19 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
LINC00477Q96M19 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
LINC00477Q96M19 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
LINC00477Q96M19 RNU6-655P-201ENST00000362858 107 ntBASIC1.4□□□□□ -2.19
LINC00477Q96M19 Y_RNA.86-201ENST00000363020 111 ntBASIC1.4□□□□□ -2.19
LINC00477Q96M19 Y_RNA.135-201ENST00000363439 95 ntBASIC1.4□□□□□ -2.19
LINC00477Q96M19 RNU6-1059P-201ENST00000363752 98 ntBASIC1.4□□□□□ -2.19
LINC00477Q96M19 Y_RNA.212-201ENST00000364177 102 ntBASIC1.4□□□□□ -2.19
LINC00477Q96M19 Y_RNA.248-201ENST00000364501 109 ntBASIC1.4□□□□□ -2.19
LINC00477Q96M19 RNU6-1283P-201ENST00000365314 105 ntBASIC1.4□□□□□ -2.19
LINC00477Q96M19 RNU6-306P-201ENST00000384617 107 ntBASIC1.4□□□□□ -2.19
LINC00477Q96M19 MIR561-201ENST00000385216 97 ntBASIC1.4□□□□□ -2.19
LINC00477Q96M19 RNU4-26P-201ENST00000410270 107 ntBASIC1.4□□□□□ -2.19
LINC00477Q96M19 FCF1P9-201ENST00000412546 282 ntBASIC1.4□□□□□ -2.19
LINC00477Q96M19 ZNF885P-201ENST00000420174 1098 ntBASIC1.4□□□□□ -2.19
LINC00477Q96M19 TOMM20P4-201ENST00000427861 435 ntBASIC1.4□□□□□ -2.19
LINC00477Q96M19 AL365400.1-201ENST00000431854 640 ntBASIC1.4□□□□□ -2.19
LINC00477Q96M19 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.4□□□□□ -2.19
LINC00477Q96M19 AL359672.1-201ENST00000442302 409 ntBASIC1.4□□□□□ -2.19
LINC00477Q96M19 snoU13.6-201ENST00000458785 104 ntBASIC1.4□□□□□ -2.19
LINC00477Q96M19 RPL30P1-201ENST00000488676 339 ntBASIC1.4□□□□□ -2.19
LINC00477Q96M19 AC091885.1-201ENST00000506658 268 ntBASIC1.4□□□□□ -2.19
LINC00477Q96M19 AC008834.1-201ENST00000511612 175 ntBASIC1.4□□□□□ -2.19
LINC00477Q96M19 RNU6-612P-201ENST00000516909 102 ntBASIC1.4□□□□□ -2.19
LINC00477Q96M19 SNORA48.11-201ENST00000517015 89 ntBASIC1.4□□□□□ -2.19
LINC00477Q96M19 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.4□□□□□ -2.19
LINC00477Q96M19 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.4□□□□□ -2.19
LINC00477Q96M19 DEFB131C-201ENST00000528817 165 ntBASIC1.4□□□□□ -2.19
LINC00477Q96M19 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.4□□□□□ -2.19
LINC00477Q96M19 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.4□□□□□ -2.19
LINC00477Q96M19 PSMA3P-201ENST00000555485 635 ntBASIC1.4□□□□□ -2.19
LINC00477Q96M19 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.4□□□□□ -2.19
LINC00477Q96M19 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.4□□□□□ -2.19
LINC00477Q96M19 AC026271.5-201ENST00000577873 130 ntBASIC1.4□□□□□ -2.19
LINC00477Q96M19 BNIP3P16-201ENST00000589779 534 ntBASIC1.4□□□□□ -2.19
LINC00477Q96M19 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.4□□□□□ -2.19
LINC00477Q96M19 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.4□□□□□ -2.19
LINC00477Q96M19 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
LINC00477Q96M19 SNORD98-201ENST00000636377 67 ntBASIC1.4□□□□□ -2.19
LINC00477Q96M19 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
LINC00477Q96M19 RNU6-1210P-201ENST00000363775 107 ntBASIC1.39□□□□□ -2.19
LINC00477Q96M19 Y_RNA.301-201ENST00000364990 103 ntBASIC1.39□□□□□ -2.19
LINC00477Q96M19 SNORA32.2-201ENST00000384049 122 ntBASIC1.39□□□□□ -2.19
LINC00477Q96M19 RNU6-1222P-201ENST00000384615 107 ntBASIC1.39□□□□□ -2.19
LINC00477Q96M19 MIR518A2-201ENST00000384966 87 ntBASIC1.39□□□□□ -2.19
LINC00477Q96M19 MIR634-201ENST00000385208 97 ntBASIC1.39□□□□□ -2.19
LINC00477Q96M19 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms