Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.88□□□□□ -1.95
VPS50Q96JG6 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.88□□□□□ -1.95
VPS50Q96JG6 AC007375.1-201ENST00000554513 578 ntBASIC2.88□□□□□ -1.95
VPS50Q96JG6 MIR4680-201ENST00000580906 66 ntBASIC2.88□□□□□ -1.95
VPS50Q96JG6 AL078605.1-201ENST00000603529 500 ntBASIC2.88□□□□□ -1.95
VPS50Q96JG6 AL355802.3-201ENST00000607571 545 ntBASIC2.88□□□□□ -1.95
VPS50Q96JG6 MIR7106-201ENST00000612419 65 ntBASIC2.88□□□□□ -1.95
VPS50Q96JG6 AL159153.1-201ENST00000619688 317 ntBASIC2.88□□□□□ -1.95
VPS50Q96JG6 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
VPS50Q96JG6 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.88□□□□□ -1.95
VPS50Q96JG6 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VPS50Q96JG6 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.87□□□□□ -1.95
VPS50Q96JG6 RNU5B-2P-201ENST00000363036 113 ntBASIC2.87□□□□□ -1.95
VPS50Q96JG6 RNU1-115P-201ENST00000365329 160 ntBASIC2.87□□□□□ -1.95
VPS50Q96JG6 Y_RNA.527-201ENST00000384573 102 ntBASIC2.87□□□□□ -1.95
VPS50Q96JG6 RNU6-700P-201ENST00000391043 107 ntBASIC2.87□□□□□ -1.95
VPS50Q96JG6 RNU2-23P-201ENST00000410545 195 ntBASIC2.87□□□□□ -1.95
VPS50Q96JG6 MTCYBP10-201ENST00000424905 650 ntBASIC2.87□□□□□ -1.95
VPS50Q96JG6 Z98742.2-201ENST00000431564 187 ntBASIC2.87□□□□□ -1.95
VPS50Q96JG6 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.87□□□□□ -1.95
VPS50Q96JG6 GPM6BP3-201ENST00000442797 145 ntBASIC2.87□□□□□ -1.95
VPS50Q96JG6 OR2AQ1P-201ENST00000451972 200 ntBASIC2.87□□□□□ -1.95
VPS50Q96JG6 snoU13.6-201ENST00000458785 104 ntBASIC2.87□□□□□ -1.95
VPS50Q96JG6 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VPS50Q96JG6 MIR3670-2-201ENST00000582974 65 ntBASIC2.87□□□□□ -1.95
VPS50Q96JG6 MIR3670-1-201ENST00000584160 65 ntBASIC2.87□□□□□ -1.95
VPS50Q96JG6 MIR3670-3-201ENST00000584855 65 ntBASIC2.87□□□□□ -1.95
VPS50Q96JG6 AC104695.3-201ENST00000604052 296 ntBASIC2.87□□□□□ -1.95
VPS50Q96JG6 AL356157.2-201ENST00000605122 111 ntBASIC2.87□□□□□ -1.95
VPS50Q96JG6 MIR3670-4-201ENST00000612260 65 ntBASIC2.87□□□□□ -1.95
VPS50Q96JG6 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.87□□□□□ -1.95
VPS50Q96JG6 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.87□□□□□ -1.95
VPS50Q96JG6 MIR4272-201ENST00000635924 64 ntBASIC2.87□□□□□ -1.95
VPS50Q96JG6 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.87□□□□□ -1.95
VPS50Q96JG6 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VPS50Q96JG6 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VPS50Q96JG6 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VPS50Q96JG6 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VPS50Q96JG6 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.86□□□□□ -1.95
VPS50Q96JG6 MAPK10-266ENST00000641066 6555 ntBASIC2.86□□□□□ -1.95
VPS50Q96JG6 RNU6-212P-201ENST00000362642 104 ntBASIC2.86□□□□□ -1.95
VPS50Q96JG6 Y_RNA.422-201ENST00000384054 114 ntBASIC2.86□□□□□ -1.95
VPS50Q96JG6 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
VPS50Q96JG6 RN7SKP61-201ENST00000410642 295 ntBASIC2.86□□□□□ -1.95
VPS50Q96JG6 EIF1AXP1-201ENST00000419267 435 ntBASIC2.86□□□□□ -1.95
VPS50Q96JG6 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.86□□□□□ -1.95
VPS50Q96JG6 OSTCP8-201ENST00000445117 448 ntBASIC2.86□□□□□ -1.95
VPS50Q96JG6 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.86□□□□□ -1.95
VPS50Q96JG6 RN7SKP210-201ENST00000459176 261 ntBASIC2.86□□□□□ -1.95
VPS50Q96JG6 RPL23AP70-201ENST00000483361 460 ntBASIC2.86□□□□□ -1.95
VPS50Q96JG6 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.86□□□□□ -1.95
VPS50Q96JG6 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.86□□□□□ -1.95
VPS50Q96JG6 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.86□□□□□ -1.95
VPS50Q96JG6 SCARNA4-201ENST00000629045 128 ntBASIC2.86□□□□□ -1.95
VPS50Q96JG6 AL606534.2-204ENST00000635008 178 ntBASIC2.86□□□□□ -1.95
VPS50Q96JG6 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.86□□□□□ -1.95
VPS50Q96JG6 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.86□□□□□ -1.95
VPS50Q96JG6 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VPS50Q96JG6 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
VPS50Q96JG6 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
VPS50Q96JG6 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
VPS50Q96JG6 AC002543.1-201ENST00000299783 1954 ntBASIC2.85□□□□□ -1.95
VPS50Q96JG6 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.85□□□□□ -1.95
VPS50Q96JG6 Y_RNA.158-201ENST00000363651 101 ntBASIC2.85□□□□□ -1.95
VPS50Q96JG6 SET-203ENST00000372688 801 ntTSL 2 BASIC2.85□□□□□ -1.95
VPS50Q96JG6 MIR625-201ENST00000385047 85 ntBASIC2.85□□□□□ -1.95
VPS50Q96JG6 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
VPS50Q96JG6 MIR190B-201ENST00000401119 79 ntBASIC2.85□□□□□ -1.95
VPS50Q96JG6 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.85□□□□□ -1.95
VPS50Q96JG6 AC007098.1-201ENST00000420122 367 ntBASIC2.85□□□□□ -1.95
VPS50Q96JG6 AL590135.1-201ENST00000422215 156 ntBASIC2.85□□□□□ -1.95
VPS50Q96JG6 AC019205.3-201ENST00000424573 156 ntBASIC2.85□□□□□ -1.95
VPS50Q96JG6 AC016700.2-201ENST00000446011 156 ntBASIC2.85□□□□□ -1.95
VPS50Q96JG6 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.85□□□□□ -1.95
VPS50Q96JG6 AP000705.1-201ENST00000454567 350 ntBASIC2.85□□□□□ -1.95
VPS50Q96JG6 AL441985.1-201ENST00000457727 251 ntBASIC2.85□□□□□ -1.95
VPS50Q96JG6 snoU13.30-201ENST00000458951 104 ntBASIC2.85□□□□□ -1.95
VPS50Q96JG6 U8.22-201ENST00000459141 133 ntBASIC2.85□□□□□ -1.95
VPS50Q96JG6 AC087477.1-201ENST00000465747 340 ntBASIC2.85□□□□□ -1.95
VPS50Q96JG6 AC090525.1-201ENST00000479116 478 ntBASIC2.85□□□□□ -1.95
VPS50Q96JG6 AC015911.1-201ENST00000495111 156 ntBASIC2.85□□□□□ -1.95
VPS50Q96JG6 AC016632.1-201ENST00000503994 196 ntBASIC2.85□□□□□ -1.95
VPS50Q96JG6 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.85□□□□□ -1.95
VPS50Q96JG6 RNU6-1045P-201ENST00000516321 107 ntBASIC2.85□□□□□ -1.95
VPS50Q96JG6 RNU6-1046P-201ENST00000516538 107 ntBASIC2.85□□□□□ -1.95
VPS50Q96JG6 AC104581.2-201ENST00000572227 430 ntBASIC2.85□□□□□ -1.95
VPS50Q96JG6 MIR5571-201ENST00000577998 113 ntBASIC2.85□□□□□ -1.95
VPS50Q96JG6 AC008737.2-201ENST00000599446 118 ntBASIC2.85□□□□□ -1.95
VPS50Q96JG6 RNU6-91P-201ENST00000607774 107 ntBASIC2.85□□□□□ -1.95
VPS50Q96JG6 AL162373.1-201ENST00000620433 407 ntBASIC2.85□□□□□ -1.95
VPS50Q96JG6 AC007792.1-201ENST00000623023 402 ntBASIC2.85□□□□□ -1.95
VPS50Q96JG6 AC005592.1-201ENST00000566527 1640 ntBASIC2.85□□□□□ -1.95
VPS50Q96JG6 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
VPS50Q96JG6 AL109809.4-201ENST00000603520 2185 ntBASIC2.84□□□□□ -1.95
VPS50Q96JG6 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.84□□□□□ -1.95
VPS50Q96JG6 SNORD114-19-201ENST00000363072 75 ntBASIC2.84□□□□□ -1.95
VPS50Q96JG6 RNU4-9P-201ENST00000364951 139 ntBASIC2.84□□□□□ -1.95
VPS50Q96JG6 MIR32-201ENST00000384965 70 ntBASIC2.84□□□□□ -1.95
VPS50Q96JG6 Y_RNA.605-201ENST00000410577 105 ntBASIC2.84□□□□□ -1.95
VPS50Q96JG6 RNU6-1328P-201ENST00000410938 106 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms