Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AL137790.1-201ENST00000634283 177 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 MIR1244-3-201ENST00000635744 85 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 MIR1244-2-201ENST00000636449 85 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 MIR1244-4-202ENST00000636813 85 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 AL450472.1-202ENST00000637286 180 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDK5RAP3Q96JB5 Y_RNA.314-201ENST00000365114 102 ntBASIC3.1□□□□□ -1.91
CDK5RAP3Q96JB5 Y_RNA.405-201ENST00000383979 100 ntBASIC3.1□□□□□ -1.91
CDK5RAP3Q96JB5 Y_RNA.451-201ENST00000384200 100 ntBASIC3.1□□□□□ -1.91
CDK5RAP3Q96JB5 Y_RNA.524-201ENST00000384564 100 ntBASIC3.1□□□□□ -1.91
CDK5RAP3Q96JB5 Y_RNA.561-201ENST00000384694 100 ntBASIC3.1□□□□□ -1.91
CDK5RAP3Q96JB5 AL590004.1-201ENST00000405321 300 ntBASIC3.1□□□□□ -1.91
CDK5RAP3Q96JB5 RNU6-1156P-201ENST00000410365 100 ntBASIC3.1□□□□□ -1.91
CDK5RAP3Q96JB5 AC018865.2-201ENST00000423631 129 ntBASIC3.1□□□□□ -1.91
CDK5RAP3Q96JB5 MTCYBP10-201ENST00000424905 650 ntBASIC3.1□□□□□ -1.91
CDK5RAP3Q96JB5 AC008267.5-201ENST00000424928 265 ntBASIC3.1□□□□□ -1.91
CDK5RAP3Q96JB5 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.1□□□□□ -1.91
CDK5RAP3Q96JB5 Z82188.1-201ENST00000436709 154 ntBASIC3.1□□□□□ -1.91
CDK5RAP3Q96JB5 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.1□□□□□ -1.91
CDK5RAP3Q96JB5 AC099799.1-201ENST00000439809 192 ntBASIC3.1□□□□□ -1.91
CDK5RAP3Q96JB5 RPL39P40-201ENST00000445481 146 ntBASIC3.1□□□□□ -1.91
CDK5RAP3Q96JB5 AC096576.1-201ENST00000489014 359 ntBASIC3.1□□□□□ -1.91
CDK5RAP3Q96JB5 AF186996.7-201ENST00000492781 209 ntBASIC3.1□□□□□ -1.91
CDK5RAP3Q96JB5 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.1□□□□□ -1.91
CDK5RAP3Q96JB5 RNU7-175P-201ENST00000515915 61 ntBASIC3.1□□□□□ -1.91
CDK5RAP3Q96JB5 RNU5F-2P-201ENST00000516066 82 ntBASIC3.1□□□□□ -1.91
CDK5RAP3Q96JB5 RN7SKP295-201ENST00000517264 153 ntBASIC3.1□□□□□ -1.91
CDK5RAP3Q96JB5 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.1□□□□□ -1.91
CDK5RAP3Q96JB5 MIR5571-201ENST00000577998 113 ntBASIC3.1□□□□□ -1.91
CDK5RAP3Q96JB5 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.1□□□□□ -1.91
CDK5RAP3Q96JB5 SCARNA4-201ENST00000629045 128 ntBASIC3.1□□□□□ -1.91
CDK5RAP3Q96JB5 SNORD98-201ENST00000636377 67 ntBASIC3.1□□□□□ -1.91
CDK5RAP3Q96JB5 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.1□□□□□ -1.91
CDK5RAP3Q96JB5 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 Z82195.2-201ENST00000612348 18351 ntBASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 OR56A5-201ENST00000340110 738 ntBASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 RNU6-655P-201ENST00000362858 107 ntBASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 Y_RNA.326-201ENST00000365176 113 ntBASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 Y_RNA.496-201ENST00000384444 101 ntBASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 MIR483-201ENST00000385070 76 ntBASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 AC007098.1-201ENST00000420122 367 ntBASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 AL135938.1-201ENST00000443141 297 ntBASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 AC104389.3-201ENST00000445629 235 ntBASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 snoU13.30-201ENST00000458951 104 ntBASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 snoU13.14-201ENST00000459372 104 ntBASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 AC087477.1-201ENST00000465747 340 ntBASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 RNU2-53P-201ENST00000516257 147 ntBASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 SCARNA3-201ENST00000517097 143 ntBASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 MIR3136-201ENST00000583498 78 ntBASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 AC010928.2-201ENST00000588017 287 ntBASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 AL078605.1-201ENST00000603529 500 ntBASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 AC005000.2-201ENST00000605468 310 ntBASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 Y_RNA.812-201ENST00000610788 101 ntBASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 AC006157.1-201ENST00000611750 366 ntBASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 Y_RNA.784-201ENST00000613803 101 ntBASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 Y_RNA.787-201ENST00000616522 101 ntBASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 Y_RNA.780-201ENST00000617336 101 ntBASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 Y_RNA.801-201ENST00000619005 101 ntBASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 MIR7157-201ENST00000635801 60 ntBASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.09□□□□□ -1.91
CDK5RAP3Q96JB5 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.08□□□□□ -1.92
CDK5RAP3Q96JB5 Y_RNA.28-201ENST00000362554 111 ntBASIC3.08□□□□□ -1.92
CDK5RAP3Q96JB5 RNU5B-2P-201ENST00000363036 113 ntBASIC3.08□□□□□ -1.92
CDK5RAP3Q96JB5 RNU6-486P-201ENST00000363116 107 ntBASIC3.08□□□□□ -1.92
CDK5RAP3Q96JB5 Y_RNA.202-201ENST00000364083 110 ntBASIC3.08□□□□□ -1.92
CDK5RAP3Q96JB5 SNORA22B-201ENST00000383876 138 ntBASIC3.08□□□□□ -1.92
CDK5RAP3Q96JB5 SNORA12.2-201ENST00000391040 156 ntBASIC3.08□□□□□ -1.92
CDK5RAP3Q96JB5 SNORA26.3-201ENST00000391119 136 ntBASIC3.08□□□□□ -1.92
CDK5RAP3Q96JB5 AL138827.1-201ENST00000402666 306 ntBASIC3.08□□□□□ -1.92
CDK5RAP3Q96JB5 AIMP1P2-201ENST00000425294 312 ntBASIC3.08□□□□□ -1.92
CDK5RAP3Q96JB5 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.08□□□□□ -1.92
CDK5RAP3Q96JB5 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.08□□□□□ -1.92
CDK5RAP3Q96JB5 snoU13.6-201ENST00000458785 104 ntBASIC3.08□□□□□ -1.92
CDK5RAP3Q96JB5 HMGB1P35-201ENST00000503360 598 ntBASIC3.08□□□□□ -1.92
CDK5RAP3Q96JB5 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.08□□□□□ -1.92
CDK5RAP3Q96JB5 RNU6-988P-201ENST00000519081 107 ntBASIC3.08□□□□□ -1.92
CDK5RAP3Q96JB5 AC107871.2-201ENST00000612894 502 ntBASIC3.08□□□□□ -1.92
CDK5RAP3Q96JB5 AC007485.1-201ENST00000616755 206 ntBASIC3.08□□□□□ -1.92
CDK5RAP3Q96JB5 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CDK5RAP3Q96JB5 AL365361.1-201ENST00000566942 3481 ntBASIC3.07□□□□□ -1.92
CDK5RAP3Q96JB5 RNU6-1210P-201ENST00000363775 107 ntBASIC3.07□□□□□ -1.92
CDK5RAP3Q96JB5 RNU4-56P-201ENST00000364700 142 ntBASIC3.07□□□□□ -1.92
CDK5RAP3Q96JB5 RNY1P14-201ENST00000384426 108 ntBASIC3.07□□□□□ -1.92
CDK5RAP3Q96JB5 MIR32-201ENST00000384965 70 ntBASIC3.07□□□□□ -1.92
CDK5RAP3Q96JB5 MIR625-201ENST00000385047 85 ntBASIC3.07□□□□□ -1.92
CDK5RAP3Q96JB5 MIR181B1-201ENST00000385240 110 ntBASIC3.07□□□□□ -1.92
CDK5RAP3Q96JB5 MTCYBP2-201ENST00000407745 171 ntBASIC3.07□□□□□ -1.92
CDK5RAP3Q96JB5 MCFD2P1-201ENST00000417812 300 ntBASIC3.07□□□□□ -1.92
CDK5RAP3Q96JB5 AC012306.1-201ENST00000423267 114 ntBASIC3.07□□□□□ -1.92
CDK5RAP3Q96JB5 EIF4EP4-201ENST00000424916 578 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms