Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RNU5F-2P-201ENST00000516066 82 ntBASIC2.81□□□□□ -1.96
CTHRC1Q96CG8 SNORA31.26-201ENST00000517250 137 ntBASIC2.81□□□□□ -1.96
CTHRC1Q96CG8 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CTHRC1Q96CG8 AL442163.3-201ENST00000554110 156 ntBASIC2.81□□□□□ -1.96
CTHRC1Q96CG8 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.81□□□□□ -1.96
CTHRC1Q96CG8 AC007318.2-201ENST00000620999 243 ntBASIC2.81□□□□□ -1.96
CTHRC1Q96CG8 7SK.10-201ENST00000621414 298 ntBASIC2.81□□□□□ -1.96
CTHRC1Q96CG8 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.81□□□□□ -1.96
CTHRC1Q96CG8 AL450472.1-202ENST00000637286 180 ntBASIC2.81□□□□□ -1.96
CTHRC1Q96CG8 AL359854.1-201ENST00000614203 1594 ntBASIC2.81□□□□□ -1.96
CTHRC1Q96CG8 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
CTHRC1Q96CG8 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CTHRC1Q96CG8 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CTHRC1Q96CG8 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 OR56A5-201ENST00000340110 738 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 MIR422A-201ENST00000362286 90 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 Y_RNA.27-201ENST00000362540 103 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 RNU1-76P-201ENST00000362903 159 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 Y_RNA.319-201ENST00000365138 92 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 RNU6-1083P-201ENST00000384022 107 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 RNU1-57P-201ENST00000384491 166 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 RPL21P75-201ENST00000396599 483 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 RPL21P28-201ENST00000401418 483 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 MIR548F4-201ENST00000408515 105 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 AC097463.2-201ENST00000421074 142 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 AL590556.1-201ENST00000423231 483 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 Z98742.2-201ENST00000431564 187 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 RN7SL75P-201ENST00000461926 281 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 RPL21P39-201ENST00000463605 483 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 AC087190.1-201ENST00000484462 480 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 AC107032.1-201ENST00000485945 480 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 AC132942.1-201ENST00000486753 483 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 AC093591.1-201ENST00000491435 481 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 RPL21P16-201ENST00000495531 483 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 HMGB1P35-201ENST00000503360 598 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 RAC1P5-201ENST00000512182 576 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 MTCO2P24-201ENST00000515611 426 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 RNA5SP341-201ENST00000516261 117 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 RNU6-635P-201ENST00000516651 102 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 SNORA31.16-201ENST00000516773 139 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 RNA5SP54-201ENST00000516951 92 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 AC131281.1-201ENST00000522984 164 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 AC079598.5-201ENST00000547460 117 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 CYP4A27P-201ENST00000567218 190 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 MIR4765-201ENST00000585007 77 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 AL137843.1-201ENST00000605078 385 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 AC093831.2-201ENST00000624393 3427 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 AC099654.7-201ENST00000635788 2127 ntBASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CTHRC1Q96CG8 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
CTHRC1Q96CG8 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.79□□□□□ -1.96
CTHRC1Q96CG8 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
CTHRC1Q96CG8 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CTHRC1Q96CG8 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CTHRC1Q96CG8 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CTHRC1Q96CG8 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CTHRC1Q96CG8 Y_RNA.47-201ENST00000362697 108 ntBASIC2.79□□□□□ -1.96
CTHRC1Q96CG8 RNU6-655P-201ENST00000362858 107 ntBASIC2.79□□□□□ -1.96
CTHRC1Q96CG8 RNU5F-3P-201ENST00000363767 117 ntBASIC2.79□□□□□ -1.96
CTHRC1Q96CG8 SNORA71.1-201ENST00000364523 117 ntBASIC2.79□□□□□ -1.96
CTHRC1Q96CG8 MIR186-201ENST00000384988 86 ntBASIC2.79□□□□□ -1.96
CTHRC1Q96CG8 MTCYBP9-201ENST00000431021 303 ntBASIC2.79□□□□□ -1.96
CTHRC1Q96CG8 AC073910.1-201ENST00000445047 438 ntBASIC2.79□□□□□ -1.96
CTHRC1Q96CG8 AP000870.1-201ENST00000472927 406 ntBASIC2.79□□□□□ -1.96
CTHRC1Q96CG8 RN7SL633P-201ENST00000488974 297 ntBASIC2.79□□□□□ -1.96
CTHRC1Q96CG8 MRPS35P2-201ENST00000508242 191 ntBASIC2.79□□□□□ -1.96
CTHRC1Q96CG8 RNU6-1114P-201ENST00000516022 107 ntBASIC2.79□□□□□ -1.96
CTHRC1Q96CG8 AC022868.1-201ENST00000517767 391 ntBASIC2.79□□□□□ -1.96
CTHRC1Q96CG8 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.79□□□□□ -1.96
CTHRC1Q96CG8 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.79□□□□□ -1.96
CTHRC1Q96CG8 HSPE1P20-201ENST00000538133 289 ntBASIC2.79□□□□□ -1.96
CTHRC1Q96CG8 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.79□□□□□ -1.96
CTHRC1Q96CG8 AC011471.1-201ENST00000585766 187 ntBASIC2.79□□□□□ -1.96
CTHRC1Q96CG8 AC078899.3-201ENST00000599065 212 ntBASIC2.79□□□□□ -1.96
CTHRC1Q96CG8 AL078605.1-201ENST00000603529 500 ntBASIC2.79□□□□□ -1.96
CTHRC1Q96CG8 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CTHRC1Q96CG8 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CTHRC1Q96CG8 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CTHRC1Q96CG8 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.79□□□□□ -1.96
CTHRC1Q96CG8 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CTHRC1Q96CG8 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CTHRC1Q96CG8 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CTHRC1Q96CG8 RNU6-238P-201ENST00000363313 106 ntBASIC2.78□□□□□ -1.96
CTHRC1Q96CG8 RNU6-1210P-201ENST00000363775 107 ntBASIC2.78□□□□□ -1.96
CTHRC1Q96CG8 Y_RNA.210-201ENST00000364161 110 ntBASIC2.78□□□□□ -1.96
CTHRC1Q96CG8 RNU6-879P-201ENST00000364328 108 ntBASIC2.78□□□□□ -1.96
CTHRC1Q96CG8 Y_RNA.471-201ENST00000384312 102 ntBASIC2.78□□□□□ -1.96
CTHRC1Q96CG8 RNU6-1109P-201ENST00000391187 107 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms