Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 RSL24D1P11-201ENST00000591045 491 ntBASIC1.27□□□□□ -2.21
CPNE4Q96A23 AC002044.1-201ENST00000606707 158 ntBASIC1.27□□□□□ -2.21
CPNE4Q96A23 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CPNE4Q96A23 CBX3P1-201ENST00000325243 554 ntBASIC1.26□□□□□ -2.21
CPNE4Q96A23 RNU1-62P-201ENST00000362599 164 ntBASIC1.26□□□□□ -2.21
CPNE4Q96A23 RNU6-552P-201ENST00000362869 119 ntBASIC1.26□□□□□ -2.21
CPNE4Q96A23 Y_RNA.159-201ENST00000363674 87 ntBASIC1.26□□□□□ -2.21
CPNE4Q96A23 Y_RNA.332-201ENST00000365271 113 ntBASIC1.26□□□□□ -2.21
CPNE4Q96A23 RNU6-439P-201ENST00000384188 106 ntBASIC1.26□□□□□ -2.21
CPNE4Q96A23 RNU6-348P-201ENST00000384386 107 ntBASIC1.26□□□□□ -2.21
CPNE4Q96A23 RNU6-160P-201ENST00000384591 107 ntBASIC1.26□□□□□ -2.21
CPNE4Q96A23 RNU2-9P-201ENST00000410194 145 ntBASIC1.26□□□□□ -2.21
CPNE4Q96A23 AC078809.1-201ENST00000427601 140 ntBASIC1.26□□□□□ -2.21
CPNE4Q96A23 AC244670.1-201ENST00000436879 112 ntBASIC1.26□□□□□ -2.21
CPNE4Q96A23 AC009474.2-201ENST00000451383 136 ntBASIC1.26□□□□□ -2.21
CPNE4Q96A23 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.26□□□□□ -2.21
CPNE4Q96A23 snoU13.9-201ENST00000458927 103 ntBASIC1.26□□□□□ -2.21
CPNE4Q96A23 RNU7-167P-201ENST00000459160 62 ntBASIC1.26□□□□□ -2.21
CPNE4Q96A23 ARL2BPP4-201ENST00000506854 471 ntBASIC1.26□□□□□ -2.21
CPNE4Q96A23 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.26□□□□□ -2.21
CPNE4Q96A23 AP005597.4-201ENST00000526762 229 ntBASIC1.26□□□□□ -2.21
CPNE4Q96A23 AC087441.2-201ENST00000529141 262 ntBASIC1.26□□□□□ -2.21
CPNE4Q96A23 AL137161.1-201ENST00000532231 390 ntBASIC1.26□□□□□ -2.21
CPNE4Q96A23 MIR3169-201ENST00000578032 83 ntBASIC1.26□□□□□ -2.21
CPNE4Q96A23 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.26□□□□□ -2.21
CPNE4Q96A23 AC040904.1-201ENST00000590850 223 ntBASIC1.26□□□□□ -2.21
CPNE4Q96A23 AC136475.10-201ENST00000620253 385 ntBASIC1.26□□□□□ -2.21
CPNE4Q96A23 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.26□□□□□ -2.21
CPNE4Q96A23 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.25□□□□□ -2.21
CPNE4Q96A23 AC092268.1-201ENST00000342691 405 ntBASIC1.25□□□□□ -2.21
CPNE4Q96A23 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CPNE4Q96A23 RNU6-517P-201ENST00000384362 110 ntBASIC1.25□□□□□ -2.21
CPNE4Q96A23 RNU1-78P-201ENST00000391248 165 ntBASIC1.25□□□□□ -2.21
CPNE4Q96A23 RNU6-903P-201ENST00000391270 109 ntBASIC1.25□□□□□ -2.21
CPNE4Q96A23 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CPNE4Q96A23 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.25□□□□□ -2.21
CPNE4Q96A23 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.25□□□□□ -2.21
CPNE4Q96A23 AL133396.1-201ENST00000432048 687 ntBASIC1.25□□□□□ -2.21
CPNE4Q96A23 AL358934.1-201ENST00000432346 324 ntBASIC1.25□□□□□ -2.21
CPNE4Q96A23 SNRPFP3-201ENST00000457792 225 ntBASIC1.25□□□□□ -2.21
CPNE4Q96A23 RNU7-95P-201ENST00000459222 64 ntBASIC1.25□□□□□ -2.21
CPNE4Q96A23 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.25□□□□□ -2.21
CPNE4Q96A23 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.25□□□□□ -2.21
CPNE4Q96A23 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.25□□□□□ -2.21
CPNE4Q96A23 SNORA31.16-201ENST00000516773 139 ntBASIC1.25□□□□□ -2.21
CPNE4Q96A23 AC069113.1-201ENST00000517763 267 ntBASIC1.25□□□□□ -2.21
CPNE4Q96A23 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.25□□□□□ -2.21
CPNE4Q96A23 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.25□□□□□ -2.21
CPNE4Q96A23 VN1R80P-201ENST00000597126 338 ntBASIC1.25□□□□□ -2.21
CPNE4Q96A23 AC121247.2-201ENST00000604776 136 ntBASIC1.25□□□□□ -2.21
CPNE4Q96A23 AC087752.4-201ENST00000605911 462 ntBASIC1.25□□□□□ -2.21
CPNE4Q96A23 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CPNE4Q96A23 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
CPNE4Q96A23 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
CPNE4Q96A23 RNU6-23P-201ENST00000363283 107 ntBASIC1.24□□□□□ -2.21
CPNE4Q96A23 RNA5SP493-201ENST00000364115 91 ntBASIC1.24□□□□□ -2.21
CPNE4Q96A23 RNU6-1103P-201ENST00000384150 107 ntBASIC1.24□□□□□ -2.21
CPNE4Q96A23 SNORA12-201ENST00000391162 147 ntBASIC1.24□□□□□ -2.21
CPNE4Q96A23 RNA5SP100-201ENST00000410903 110 ntBASIC1.24□□□□□ -2.21
CPNE4Q96A23 RNA5SP59-201ENST00000410922 110 ntBASIC1.24□□□□□ -2.21
CPNE4Q96A23 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.24□□□□□ -2.21
CPNE4Q96A23 AP1B1P2-201ENST00000416196 106 ntBASIC1.24□□□□□ -2.21
CPNE4Q96A23 BTF3P4-201ENST00000418852 495 ntBASIC1.24□□□□□ -2.21
CPNE4Q96A23 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.24□□□□□ -2.21
CPNE4Q96A23 AL590135.1-201ENST00000422215 156 ntBASIC1.24□□□□□ -2.21
CPNE4Q96A23 AC019205.3-201ENST00000424573 156 ntBASIC1.24□□□□□ -2.21
CPNE4Q96A23 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.24□□□□□ -2.21
CPNE4Q96A23 AC016700.2-201ENST00000446011 156 ntBASIC1.24□□□□□ -2.21
CPNE4Q96A23 RNU1-131P-201ENST00000458943 161 ntBASIC1.24□□□□□ -2.21
CPNE4Q96A23 RPL31P58-201ENST00000469001 379 ntBASIC1.24□□□□□ -2.21
CPNE4Q96A23 AC015911.1-201ENST00000495111 156 ntBASIC1.24□□□□□ -2.21
CPNE4Q96A23 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.24□□□□□ -2.21
CPNE4Q96A23 RNA5SP490-201ENST00000517141 136 ntBASIC1.24□□□□□ -2.21
CPNE4Q96A23 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.24□□□□□ -2.21
CPNE4Q96A23 MIR4528-201ENST00000577763 90 ntBASIC1.24□□□□□ -2.21
CPNE4Q96A23 MIR4421-201ENST00000578133 69 ntBASIC1.24□□□□□ -2.21
CPNE4Q96A23 MTATP6P3-201ENST00000581686 676 ntBASIC1.24□□□□□ -2.21
CPNE4Q96A23 AC110760.3-201ENST00000598794 467 ntBASIC1.24□□□□□ -2.21
CPNE4Q96A23 AC012507.3-201ENST00000603556 477 ntBASIC1.24□□□□□ -2.21
CPNE4Q96A23 AC107304.1-201ENST00000604229 296 ntBASIC1.24□□□□□ -2.21
CPNE4Q96A23 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.24□□□□□ -2.21
CPNE4Q96A23 AL158063.1-201ENST00000615349 536 ntBASIC1.24□□□□□ -2.21
CPNE4Q96A23 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.24□□□□□ -2.21
CPNE4Q96A23 AP000770.2-201ENST00000623694 100 ntBASIC1.24□□□□□ -2.21
CPNE4Q96A23 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.23□□□□□ -2.21
CPNE4Q96A23 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CPNE4Q96A23 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CPNE4Q96A23 RNU4-56P-201ENST00000364700 142 ntBASIC1.23□□□□□ -2.21
CPNE4Q96A23 RNU6-827P-201ENST00000365553 106 ntBASIC1.23□□□□□ -2.21
CPNE4Q96A23 RNU6-26P-201ENST00000383985 107 ntBASIC1.23□□□□□ -2.21
CPNE4Q96A23 SNORD26-201ENST00000384147 75 ntBASIC1.23□□□□□ -2.21
CPNE4Q96A23 SNORA75-201ENST00000384158 137 ntBASIC1.23□□□□□ -2.21
CPNE4Q96A23 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.23□□□□□ -2.21
CPNE4Q96A23 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.23□□□□□ -2.21
CPNE4Q96A23 NCOR1P3-201ENST00000420479 303 ntBASIC1.23□□□□□ -2.21
CPNE4Q96A23 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.23□□□□□ -2.21
CPNE4Q96A23 CETN4P-201ENST00000432407 469 ntBASIC1.23□□□□□ -2.21
CPNE4Q96A23 USP9YP29-201ENST00000445112 563 ntBASIC1.23□□□□□ -2.21
CPNE4Q96A23 FTH1P25-201ENST00000447665 469 ntBASIC1.23□□□□□ -2.21
CPNE4Q96A23 AL031274.1-201ENST00000450334 232 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms