Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HPS1Q92902 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HPS1Q92902 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.27□□□□□ -1.73
HPS1Q92902 AL356489.2-201ENST00000566968 3528 ntBASIC4.27□□□□□ -1.73
HPS1Q92902 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HPS1Q92902 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.26□□□□□ -1.73
HPS1Q92902 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HPS1Q92902 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
HPS1Q92902 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
HPS1Q92902 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HPS1Q92902 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.26□□□□□ -1.73
HPS1Q92902 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.26□□□□□ -1.73
HPS1Q92902 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.26□□□□□ -1.73
HPS1Q92902 Y_RNA.17-201ENST00000362433 111 ntBASIC4.26□□□□□ -1.73
HPS1Q92902 SNORA27.1-201ENST00000362604 124 ntBASIC4.26□□□□□ -1.73
HPS1Q92902 RNU4-15P-201ENST00000362613 141 ntBASIC4.26□□□□□ -1.73
HPS1Q92902 Y_RNA.111-201ENST00000363248 100 ntBASIC4.26□□□□□ -1.73
HPS1Q92902 Y_RNA.198-201ENST00000364013 98 ntBASIC4.26□□□□□ -1.73
HPS1Q92902 TOMM22P1-201ENST00000418578 312 ntBASIC4.26□□□□□ -1.73
HPS1Q92902 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC4.26□□□□□ -1.73
HPS1Q92902 HMGN2P20-201ENST00000437531 273 ntBASIC4.26□□□□□ -1.73
HPS1Q92902 RPS29P9-201ENST00000440360 171 ntBASIC4.26□□□□□ -1.73
HPS1Q92902 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.26□□□□□ -1.73
HPS1Q92902 MIR4737-201ENST00000583979 81 ntBASIC4.26□□□□□ -1.73
HPS1Q92902 FAM71BP1-201ENST00000604431 523 ntBASIC4.26□□□□□ -1.73
HPS1Q92902 AC019206.1-201ENST00000621938 425 ntBASIC4.26□□□□□ -1.73
HPS1Q92902 MIR6715B-201ENST00000637172 77 ntBASIC4.26□□□□□ -1.73
HPS1Q92902 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HPS1Q92902 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HPS1Q92902 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.26□□□□□ -1.73
HPS1Q92902 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HPS1Q92902 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
HPS1Q92902 AC010300.1-201ENST00000600671 5134 ntBASIC4.26□□□□□ -1.73
HPS1Q92902 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HPS1Q92902 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.26□□□□□ -1.73
HPS1Q92902 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
HPS1Q92902 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HPS1Q92902 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HPS1Q92902 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
HPS1Q92902 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HPS1Q92902 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
HPS1Q92902 RNA5SP428-201ENST00000365129 132 ntBASIC4.25□□□□□ -1.73
HPS1Q92902 RNU6-1181P-201ENST00000384191 106 ntBASIC4.25□□□□□ -1.73
HPS1Q92902 MIR192-201ENST00000384915 110 ntBASIC4.25□□□□□ -1.73
HPS1Q92902 MIR586-201ENST00000385035 97 ntBASIC4.25□□□□□ -1.73
HPS1Q92902 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.25□□□□□ -1.73
HPS1Q92902 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.25□□□□□ -1.73
HPS1Q92902 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4.25□□□□□ -1.73
HPS1Q92902 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.25□□□□□ -1.73
HPS1Q92902 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.25□□□□□ -1.73
HPS1Q92902 RNU6-893P-201ENST00000458841 100 ntBASIC4.25□□□□□ -1.73
HPS1Q92902 MIR4662B-201ENST00000579498 81 ntBASIC4.25□□□□□ -1.73
HPS1Q92902 MIR2681-201ENST00000581814 105 ntBASIC4.25□□□□□ -1.73
HPS1Q92902 AL591926.8-201ENST00000616876 211 ntBASIC4.25□□□□□ -1.73
HPS1Q92902 AC087385.3-201ENST00000620477 187 ntBASIC4.25□□□□□ -1.73
HPS1Q92902 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HPS1Q92902 AC025031.4-201ENST00000621248 3271 ntBASIC4.24□□□□□ -1.73
HPS1Q92902 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HPS1Q92902 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HPS1Q92902 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HPS1Q92902 AL356292.1-201ENST00000283110 373 ntBASIC4.24□□□□□ -1.73
HPS1Q92902 RNU6-1138P-201ENST00000365359 106 ntBASIC4.24□□□□□ -1.73
HPS1Q92902 Y_RNA.366-201ENST00000365540 102 ntBASIC4.24□□□□□ -1.73
HPS1Q92902 SNORA1.3-201ENST00000384676 136 ntBASIC4.24□□□□□ -1.73
HPS1Q92902 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HPS1Q92902 SNORA77-201ENST00000408716 125 ntBASIC4.24□□□□□ -1.73
HPS1Q92902 AL590139.1-201ENST00000416267 400 ntBASIC4.24□□□□□ -1.73
HPS1Q92902 AC006463.2-201ENST00000473326 348 ntBASIC4.24□□□□□ -1.73
HPS1Q92902 RN7SL319P-201ENST00000480656 221 ntBASIC4.24□□□□□ -1.73
HPS1Q92902 AC022137.1-201ENST00000483735 151 ntBASIC4.24□□□□□ -1.73
HPS1Q92902 RN7SKP21-201ENST00000516503 220 ntBASIC4.24□□□□□ -1.73
HPS1Q92902 RNA5SP490-201ENST00000517141 136 ntBASIC4.24□□□□□ -1.73
HPS1Q92902 MIR4330-201ENST00000579077 105 ntBASIC4.24□□□□□ -1.73
HPS1Q92902 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.24□□□□□ -1.73
HPS1Q92902 AC006971.1-201ENST00000407916 4486 ntBASIC4.23□□□□□ -1.73
HPS1Q92902 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HPS1Q92902 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
HPS1Q92902 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
HPS1Q92902 AC103988.1-201ENST00000566382 2177 ntBASIC4.23□□□□□ -1.73
HPS1Q92902 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HPS1Q92902 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HPS1Q92902 Y_RNA.66-201ENST00000362862 102 ntBASIC4.23□□□□□ -1.73
HPS1Q92902 SNORA73.1-201ENST00000363107 205 ntBASIC4.23□□□□□ -1.73
HPS1Q92902 Y_RNA.107-201ENST00000363190 121 ntBASIC4.23□□□□□ -1.73
HPS1Q92902 RNU6-1305P-201ENST00000364353 104 ntBASIC4.23□□□□□ -1.73
HPS1Q92902 RNU6-1292P-201ENST00000383856 107 ntBASIC4.23□□□□□ -1.73
HPS1Q92902 SNORA70.10-201ENST00000384515 134 ntBASIC4.23□□□□□ -1.73
HPS1Q92902 MIR3074-201ENST00000384885 81 ntBASIC4.23□□□□□ -1.73
HPS1Q92902 RNU6-279P-201ENST00000391297 101 ntBASIC4.23□□□□□ -1.73
HPS1Q92902 AC008134.1-201ENST00000420943 193 ntBASIC4.23□□□□□ -1.73
HPS1Q92902 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.23□□□□□ -1.73
HPS1Q92902 AL691482.1-201ENST00000453255 87 ntBASIC4.23□□□□□ -1.73
HPS1Q92902 RPL39P39-201ENST00000455840 151 ntBASIC4.23□□□□□ -1.73
HPS1Q92902 snoU13.14-201ENST00000459372 104 ntBASIC4.23□□□□□ -1.73
HPS1Q92902 RNA5SP43-201ENST00000516559 110 ntBASIC4.23□□□□□ -1.73
HPS1Q92902 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC4.23□□□□□ -1.73
HPS1Q92902 AC141557.1-201ENST00000540982 400 ntBASIC4.23□□□□□ -1.73
HPS1Q92902 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
HPS1Q92902 RPL23AP91-201ENST00000569211 455 ntBASIC4.23□□□□□ -1.73
HPS1Q92902 MIR4270-201ENST00000581799 70 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms