Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 SNX2P2-201ENST00000424553 323 ntBASIC0.7□□□□□ -2.3
TOPBP1Q92547 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.7□□□□□ -2.3
TOPBP1Q92547 SNRPEP8-201ENST00000442866 260 ntBASIC0.7□□□□□ -2.3
TOPBP1Q92547 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.7□□□□□ -2.3
TOPBP1Q92547 SNORD116-28-201ENST00000516123 91 ntBASIC0.7□□□□□ -2.3
TOPBP1Q92547 SUMO2P18-201ENST00000518873 252 ntBASIC0.7□□□□□ -2.3
TOPBP1Q92547 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.7□□□□□ -2.3
TOPBP1Q92547 AL592221.1-201ENST00000605266 382 ntBASIC0.7□□□□□ -2.3
TOPBP1Q92547 AC144521.1-201ENST00000607148 956 ntBASIC0.7□□□□□ -2.3
TOPBP1Q92547 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.7□□□□□ -2.3
TOPBP1Q92547 AC106800.4-201ENST00000614905 153 ntBASIC0.7□□□□□ -2.3
TOPBP1Q92547 AC026585.1-201ENST00000619582 524 ntBASIC0.7□□□□□ -2.3
TOPBP1Q92547 AC073343.1-201ENST00000328239 651 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 RNU6-1285P-201ENST00000363480 105 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 SNORD32B-201ENST00000364460 84 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.69□□□□□ -2.3
TOPBP1Q92547 AC099677.2-201ENST00000436385 175 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 MTND1P30-201ENST00000441241 901 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.69□□□□□ -2.3
TOPBP1Q92547 snoU13.30-201ENST00000458951 104 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 MTCO3P28-201ENST00000513351 515 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 RNA5SP481-201ENST00000516814 122 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.69□□□□□ -2.3
TOPBP1Q92547 AC010376.1-201ENST00000522101 334 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 AC107934.1-201ENST00000522215 217 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 CENPUP1-201ENST00000526649 1202 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 AC115990.1-201ENST00000526957 301 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.69□□□□□ -2.3
TOPBP1Q92547 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.69□□□□□ -2.3
TOPBP1Q92547 AC091135.1-201ENST00000585943 307 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 MIR6718-201ENST00000616153 80 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.69□□□□□ -2.3
TOPBP1Q92547 AL159152.1-201ENST00000635019 2587 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 RNU1-124P-201ENST00000363861 145 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 RNU1-96P-201ENST00000364163 162 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 RNU6-190P-201ENST00000384154 102 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 SNORA25-201ENST00000384384 134 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 RNU6-1065P-201ENST00000384513 106 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 MIR194-1-201ENST00000384892 85 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.69□□□□□ -2.3
TOPBP1Q92547 AC013410.2-201ENST00000422627 201 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 PRPS1P1-201ENST00000445305 876 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 HSPE1P13-201ENST00000451143 297 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 AC016550.1-201ENST00000505348 785 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 AC010587.2-201ENST00000511727 448 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 RNU6-201P-201ENST00000517100 61 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 AC011979.2-201ENST00000527568 352 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 AL512310.8-201ENST00000550183 120 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 AC087883.1-201ENST00000551882 391 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 AC136932.1-201ENST00000574771 208 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 MIR548AC-201ENST00000585049 88 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 AC121334.2-201ENST00000605387 271 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
TOPBP1Q92547 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.69□□□□□ -2.3
TOPBP1Q92547 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.69□□□□□ -2.3
TOPBP1Q92547 SNORA4.1-201ENST00000364263 144 ntBASIC0.68□□□□□ -2.3
TOPBP1Q92547 RNY4P3-201ENST00000365254 95 ntBASIC0.68□□□□□ -2.3
TOPBP1Q92547 RNU6-142P-201ENST00000384019 107 ntBASIC0.68□□□□□ -2.3
TOPBP1Q92547 RNU6-1257P-201ENST00000384625 110 ntBASIC0.68□□□□□ -2.3
TOPBP1Q92547 MIR329-1-201ENST00000385028 80 ntBASIC0.68□□□□□ -2.3
TOPBP1Q92547 MIR548B-201ENST00000385247 97 ntBASIC0.68□□□□□ -2.3
TOPBP1Q92547 RNU6-1176P-201ENST00000390955 107 ntBASIC0.68□□□□□ -2.3
TOPBP1Q92547 RNA5SP299-201ENST00000391203 116 ntBASIC0.68□□□□□ -2.3
TOPBP1Q92547 RAP1BP3-201ENST00000407180 549 ntBASIC0.68□□□□□ -2.3
TOPBP1Q92547 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.68□□□□□ -2.3
TOPBP1Q92547 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.68□□□□□ -2.3
TOPBP1Q92547 MTND5P2-201ENST00000442927 1142 ntBASIC0.68□□□□□ -2.3
TOPBP1Q92547 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.68□□□□□ -2.3
TOPBP1Q92547 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.68□□□□□ -2.3
TOPBP1Q92547 AC022447.4-201ENST00000504053 364 ntBASIC0.68□□□□□ -2.3
TOPBP1Q92547 RNU6-1003P-201ENST00000517099 105 ntBASIC0.68□□□□□ -2.3
TOPBP1Q92547 RNA5SP437-201ENST00000517249 129 ntBASIC0.68□□□□□ -2.3
TOPBP1Q92547 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.68□□□□□ -2.3
TOPBP1Q92547 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.68□□□□□ -2.3
TOPBP1Q92547 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.68□□□□□ -2.3
TOPBP1Q92547 MIR3118-1-201ENST00000581787 76 ntBASIC0.68□□□□□ -2.3
TOPBP1Q92547 PART1_2.1-201ENST00000612397 250 ntBASIC0.68□□□□□ -2.3
TOPBP1Q92547 AC099786.3-201ENST00000565735 1410 ntBASIC0.67□□□□□ -2.3
TOPBP1Q92547 MIR340-201ENST00000362125 95 ntBASIC0.67□□□□□ -2.3
TOPBP1Q92547 RNU6-433P-201ENST00000363216 104 ntBASIC0.67□□□□□ -2.3
TOPBP1Q92547 MIR578-201ENST00000384828 96 ntBASIC0.67□□□□□ -2.3
TOPBP1Q92547 RPS20P2-201ENST00000402520 389 ntBASIC0.67□□□□□ -2.3
TOPBP1Q92547 MTND4P20-201ENST00000424125 869 ntBASIC0.67□□□□□ -2.3
TOPBP1Q92547 AL353777.1-201ENST00000425552 326 ntBASIC0.67□□□□□ -2.3
TOPBP1Q92547 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.67□□□□□ -2.3
TOPBP1Q92547 AC114982.1-201ENST00000469402 321 ntBASIC0.67□□□□□ -2.3
TOPBP1Q92547 AC145146.1-201ENST00000496370 254 ntBASIC0.67□□□□□ -2.3
TOPBP1Q92547 RN7SKP88-201ENST00000516847 250 ntBASIC0.67□□□□□ -2.3
TOPBP1Q92547 AP002453.2-201ENST00000533503 320 ntBASIC0.67□□□□□ -2.3
TOPBP1Q92547 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.67□□□□□ -2.3
TOPBP1Q92547 AC015688.6-201ENST00000577737 104 ntBASIC0.67□□□□□ -2.3
TOPBP1Q92547 BX284668.6-201ENST00000606899 438 ntBASIC0.67□□□□□ -2.3
TOPBP1Q92547 AC004492.1-201ENST00000607036 742 ntBASIC0.67□□□□□ -2.3
TOPBP1Q92547 AL365434.2-201ENST00000607979 234 ntBASIC0.67□□□□□ -2.3
TOPBP1Q92547 7SK.8-201ENST00000612110 250 ntBASIC0.67□□□□□ -2.3
TOPBP1Q92547 7SK.11-201ENST00000615477 250 ntBASIC0.67□□□□□ -2.3
TOPBP1Q92547 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms