Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RPL21P28-201ENST00000401418 483 ntBASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 MIR1302-3-201ENST00000408128 138 ntBASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 SNORD88.1-201ENST00000408684 91 ntBASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 AL590556.1-201ENST00000423231 483 ntBASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 IPO7P1-201ENST00000442031 636 ntBASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 RPL21P39-201ENST00000463605 483 ntBASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 AC103975.1-201ENST00000482506 483 ntBASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 AC087190.1-201ENST00000484462 480 ntBASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 AC107032.1-201ENST00000485945 480 ntBASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 AC132942.1-201ENST00000486753 483 ntBASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 AC093591.1-201ENST00000491435 481 ntBASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 RPL21P16-201ENST00000495531 483 ntBASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 SNORA74D-201ENST00000516404 141 ntBASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 AP002404.1-201ENST00000532005 451 ntBASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 AC007536.1-201ENST00000533382 349 ntBASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 AL442163.3-201ENST00000554110 156 ntBASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 MIR4503-201ENST00000582187 83 ntBASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.92□□□□□ -1.94
ATG4AQ8WYN0 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
ATG4AQ8WYN0 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.92□□□□□ -1.94
ATG4AQ8WYN0 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
ATG4AQ8WYN0 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
ATG4AQ8WYN0 RNU6-222P-201ENST00000362438 107 ntBASIC2.92□□□□□ -1.94
ATG4AQ8WYN0 Y_RNA.27-201ENST00000362540 103 ntBASIC2.92□□□□□ -1.94
ATG4AQ8WYN0 Y_RNA.276-201ENST00000364732 109 ntBASIC2.92□□□□□ -1.94
ATG4AQ8WYN0 SET-203ENST00000372688 801 ntTSL 2 BASIC2.92□□□□□ -1.94
ATG4AQ8WYN0 Y_RNA.452-201ENST00000384202 108 ntBASIC2.92□□□□□ -1.94
ATG4AQ8WYN0 AL031121.1-201ENST00000406553 254 ntBASIC2.92□□□□□ -1.94
ATG4AQ8WYN0 AC138623.1-201ENST00000418060 216 ntBASIC2.92□□□□□ -1.94
ATG4AQ8WYN0 USP9YP16-201ENST00000430287 407 ntBASIC2.92□□□□□ -1.94
ATG4AQ8WYN0 RPL21P2-201ENST00000440049 481 ntBASIC2.92□□□□□ -1.94
ATG4AQ8WYN0 USP9YP23-201ENST00000455085 407 ntBASIC2.92□□□□□ -1.94
ATG4AQ8WYN0 U8.22-201ENST00000459141 133 ntBASIC2.92□□□□□ -1.94
ATG4AQ8WYN0 RN7SL807P-201ENST00000470923 297 ntBASIC2.92□□□□□ -1.94
ATG4AQ8WYN0 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.92□□□□□ -1.94
ATG4AQ8WYN0 RPS27P26-201ENST00000494583 239 ntBASIC2.92□□□□□ -1.94
ATG4AQ8WYN0 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.92□□□□□ -1.94
ATG4AQ8WYN0 AC091826.1-201ENST00000514065 313 ntBASIC2.92□□□□□ -1.94
ATG4AQ8WYN0 AC034114.1-201ENST00000520293 285 ntBASIC2.92□□□□□ -1.94
ATG4AQ8WYN0 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.92□□□□□ -1.94
ATG4AQ8WYN0 AL137843.1-201ENST00000605078 385 ntBASIC2.92□□□□□ -1.94
ATG4AQ8WYN0 Z75746.1-201ENST00000440243 2080 ntBASIC2.92□□□□□ -1.94
ATG4AQ8WYN0 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.92□□□□□ -1.94
ATG4AQ8WYN0 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.91□□□□□ -1.94
ATG4AQ8WYN0 RNU1-76P-201ENST00000362903 159 ntBASIC2.91□□□□□ -1.94
ATG4AQ8WYN0 SNORD114-19-201ENST00000363072 75 ntBASIC2.91□□□□□ -1.94
ATG4AQ8WYN0 SNORA38.1-201ENST00000364172 131 ntBASIC2.91□□□□□ -1.94
ATG4AQ8WYN0 RNU6-26P-201ENST00000383985 107 ntBASIC2.91□□□□□ -1.94
ATG4AQ8WYN0 RNU6-708P-201ENST00000384217 107 ntBASIC2.91□□□□□ -1.94
ATG4AQ8WYN0 U8.10-201ENST00000384260 133 ntBASIC2.91□□□□□ -1.94
ATG4AQ8WYN0 RNA5SP354-201ENST00000391247 136 ntBASIC2.91□□□□□ -1.94
ATG4AQ8WYN0 RNA5SP344-201ENST00000411081 104 ntBASIC2.91□□□□□ -1.94
ATG4AQ8WYN0 AL590135.1-201ENST00000422215 156 ntBASIC2.91□□□□□ -1.94
ATG4AQ8WYN0 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.91□□□□□ -1.94
ATG4AQ8WYN0 AC019205.3-201ENST00000424573 156 ntBASIC2.91□□□□□ -1.94
ATG4AQ8WYN0 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.91□□□□□ -1.94
ATG4AQ8WYN0 OSTCP8-201ENST00000445117 448 ntBASIC2.91□□□□□ -1.94
ATG4AQ8WYN0 AC016700.2-201ENST00000446011 156 ntBASIC2.91□□□□□ -1.94
ATG4AQ8WYN0 AP001324.2-201ENST00000461163 319 ntBASIC2.91□□□□□ -1.94
ATG4AQ8WYN0 RPS29P26-201ENST00000477483 171 ntBASIC2.91□□□□□ -1.94
ATG4AQ8WYN0 RN7SL297P-201ENST00000483161 293 ntBASIC2.91□□□□□ -1.94
ATG4AQ8WYN0 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.91□□□□□ -1.94
ATG4AQ8WYN0 SCGB1D5P-201ENST00000515134 247 ntBASIC2.91□□□□□ -1.94
ATG4AQ8WYN0 SNORA31.16-201ENST00000516773 139 ntBASIC2.91□□□□□ -1.94
ATG4AQ8WYN0 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
ATG4AQ8WYN0 AP002770.2-201ENST00000543613 532 ntBASIC2.91□□□□□ -1.94
ATG4AQ8WYN0 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.91□□□□□ -1.94
ATG4AQ8WYN0 MIR3149-201ENST00000584629 83 ntBASIC2.91□□□□□ -1.94
ATG4AQ8WYN0 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.91□□□□□ -1.94
ATG4AQ8WYN0 AC023043.3-201ENST00000593113 385 ntBASIC2.91□□□□□ -1.94
ATG4AQ8WYN0 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.91□□□□□ -1.94
ATG4AQ8WYN0 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.91□□□□□ -1.94
ATG4AQ8WYN0 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
ATG4AQ8WYN0 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.91□□□□□ -1.94
ATG4AQ8WYN0 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.91□□□□□ -1.94
ATG4AQ8WYN0 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
ATG4AQ8WYN0 RNU6-212P-201ENST00000362642 104 ntBASIC2.9□□□□□ -1.95
ATG4AQ8WYN0 RNU6-238P-201ENST00000363313 106 ntBASIC2.9□□□□□ -1.95
ATG4AQ8WYN0 RNY3P4-201ENST00000384428 101 ntBASIC2.9□□□□□ -1.95
ATG4AQ8WYN0 RNU1-139P-201ENST00000391307 165 ntBASIC2.9□□□□□ -1.95
ATG4AQ8WYN0 RPL21P1-201ENST00000399532 476 ntBASIC2.9□□□□□ -1.95
ATG4AQ8WYN0 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.9□□□□□ -1.95
ATG4AQ8WYN0 FCF1P4-201ENST00000448326 183 ntBASIC2.9□□□□□ -1.95
ATG4AQ8WYN0 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.9□□□□□ -1.95
ATG4AQ8WYN0 snoU13.14-201ENST00000459372 104 ntBASIC2.9□□□□□ -1.95
ATG4AQ8WYN0 AP000870.1-201ENST00000472927 406 ntBASIC2.9□□□□□ -1.95
ATG4AQ8WYN0 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.9□□□□□ -1.95
ATG4AQ8WYN0 AC090525.1-201ENST00000479116 478 ntBASIC2.9□□□□□ -1.95
ATG4AQ8WYN0 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms