Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 SNORD73A-201ENST00000386062 65 ntBASIC1.35□□□□□ -2.19
LINC01560Q8TB33 BTF3L4P2-201ENST00000392798 346 ntBASIC1.35□□□□□ -2.19
LINC01560Q8TB33 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.35□□□□□ -2.19
LINC01560Q8TB33 MIR1323-201ENST00000408090 73 ntBASIC1.35□□□□□ -2.19
LINC01560Q8TB33 RNU2-66P-201ENST00000410650 161 ntBASIC1.35□□□□□ -2.19
LINC01560Q8TB33 AL663109.1-201ENST00000411498 844 ntBASIC1.35□□□□□ -2.19
LINC01560Q8TB33 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.35□□□□□ -2.19
LINC01560Q8TB33 AL590135.1-201ENST00000422215 156 ntBASIC1.35□□□□□ -2.19
LINC01560Q8TB33 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.35□□□□□ -2.19
LINC01560Q8TB33 AC019205.3-201ENST00000424573 156 ntBASIC1.35□□□□□ -2.19
LINC01560Q8TB33 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.35□□□□□ -2.19
LINC01560Q8TB33 AC244670.1-201ENST00000436879 112 ntBASIC1.35□□□□□ -2.19
LINC01560Q8TB33 AL121601.2-201ENST00000438019 707 ntBASIC1.35□□□□□ -2.19
LINC01560Q8TB33 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.35□□□□□ -2.19
LINC01560Q8TB33 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.35□□□□□ -2.19
LINC01560Q8TB33 AC016700.2-201ENST00000446011 156 ntBASIC1.35□□□□□ -2.19
LINC01560Q8TB33 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.35□□□□□ -2.19
LINC01560Q8TB33 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.35□□□□□ -2.19
LINC01560Q8TB33 AC015911.1-201ENST00000495111 156 ntBASIC1.35□□□□□ -2.19
LINC01560Q8TB33 AC022447.4-201ENST00000504053 364 ntBASIC1.35□□□□□ -2.19
LINC01560Q8TB33 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.35□□□□□ -2.19
LINC01560Q8TB33 AC079140.5-201ENST00000507882 310 ntBASIC1.35□□□□□ -2.19
LINC01560Q8TB33 MIR449C-201ENST00000516047 92 ntBASIC1.35□□□□□ -2.19
LINC01560Q8TB33 RNU6-1038P-201ENST00000516516 104 ntBASIC1.35□□□□□ -2.19
LINC01560Q8TB33 RNU6-405P-201ENST00000516637 110 ntBASIC1.35□□□□□ -2.19
LINC01560Q8TB33 RNU2-44P-201ENST00000516795 194 ntBASIC1.35□□□□□ -2.19
LINC01560Q8TB33 AC069113.1-201ENST00000517763 267 ntBASIC1.35□□□□□ -2.19
LINC01560Q8TB33 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.35□□□□□ -2.19
LINC01560Q8TB33 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.35□□□□□ -2.19
LINC01560Q8TB33 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.35□□□□□ -2.19
LINC01560Q8TB33 AL118558.2-201ENST00000556294 238 ntBASIC1.35□□□□□ -2.19
LINC01560Q8TB33 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.35□□□□□ -2.19
LINC01560Q8TB33 MIR4287-201ENST00000579398 78 ntBASIC1.35□□□□□ -2.19
LINC01560Q8TB33 PIGPP4-201ENST00000584447 307 ntBASIC1.35□□□□□ -2.19
LINC01560Q8TB33 AC087683.1-201ENST00000591187 441 ntBASIC1.35□□□□□ -2.19
LINC01560Q8TB33 AC008749.1-201ENST00000597650 306 ntBASIC1.35□□□□□ -2.19
LINC01560Q8TB33 AL078605.1-201ENST00000603529 500 ntBASIC1.35□□□□□ -2.19
LINC01560Q8TB33 AP001330.5-201ENST00000607176 411 ntBASIC1.35□□□□□ -2.19
LINC01560Q8TB33 AC245008.1-201ENST00000608123 476 ntBASIC1.35□□□□□ -2.19
LINC01560Q8TB33 Z99129.1-201ENST00000612510 255 ntBASIC1.35□□□□□ -2.19
LINC01560Q8TB33 AC068792.1-201ENST00000621354 417 ntBASIC1.35□□□□□ -2.19
LINC01560Q8TB33 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
LINC01560Q8TB33 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
LINC01560Q8TB33 SNORA7.1-201ENST00000363750 139 ntBASIC1.34□□□□□ -2.19
LINC01560Q8TB33 RNU6-142P-201ENST00000384019 107 ntBASIC1.34□□□□□ -2.19
LINC01560Q8TB33 MIR517C-201ENST00000385103 95 ntBASIC1.34□□□□□ -2.19
LINC01560Q8TB33 SNORA40.19-201ENST00000390846 128 ntBASIC1.34□□□□□ -2.19
LINC01560Q8TB33 AL512604.1-201ENST00000404812 257 ntBASIC1.34□□□□□ -2.19
LINC01560Q8TB33 RN7SKP61-201ENST00000410642 295 ntBASIC1.34□□□□□ -2.19
LINC01560Q8TB33 SRIP3-201ENST00000413200 219 ntBASIC1.34□□□□□ -2.19
LINC01560Q8TB33 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.34□□□□□ -2.19
LINC01560Q8TB33 RPL23AP95-201ENST00000426806 265 ntBASIC1.34□□□□□ -2.19
LINC01560Q8TB33 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.34□□□□□ -2.19
LINC01560Q8TB33 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.34□□□□□ -2.19
LINC01560Q8TB33 MTND1P29-201ENST00000448112 647 ntBASIC1.34□□□□□ -2.19
LINC01560Q8TB33 PMCHL2-203ENST00000457791 237 ntBASIC1.34□□□□□ -2.19
LINC01560Q8TB33 MTCO3P38-201ENST00000468910 766 ntBASIC1.34□□□□□ -2.19
LINC01560Q8TB33 AC093259.1-201ENST00000509755 300 ntBASIC1.34□□□□□ -2.19
LINC01560Q8TB33 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.34□□□□□ -2.19
LINC01560Q8TB33 RPL39P5-202ENST00000512505 151 ntBASIC1.34□□□□□ -2.19
LINC01560Q8TB33 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.34□□□□□ -2.19
LINC01560Q8TB33 AC104383.1-201ENST00000530297 370 ntBASIC1.34□□□□□ -2.19
LINC01560Q8TB33 HSPE1P4-201ENST00000550617 308 ntBASIC1.34□□□□□ -2.19
LINC01560Q8TB33 TRAV32-201ENST00000553993 340 ntBASIC1.34□□□□□ -2.19
LINC01560Q8TB33 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.34□□□□□ -2.19
LINC01560Q8TB33 AC024614.2-201ENST00000577584 372 ntBASIC1.34□□□□□ -2.19
LINC01560Q8TB33 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.34□□□□□ -2.19
LINC01560Q8TB33 MIR3941-201ENST00000582572 103 ntBASIC1.34□□□□□ -2.19
LINC01560Q8TB33 AC078899.2-201ENST00000595282 212 ntBASIC1.34□□□□□ -2.19
LINC01560Q8TB33 AC068944.2-201ENST00000610373 403 ntBASIC1.34□□□□□ -2.19
LINC01560Q8TB33 AL450472.1-202ENST00000637286 180 ntBASIC1.34□□□□□ -2.19
LINC01560Q8TB33 ZNF209P-201ENST00000593450 2304 ntBASIC1.34□□□□□ -2.2
LINC01560Q8TB33 AP000560.1-201ENST00000624150 1937 ntBASIC1.34□□□□□ -2.2
LINC01560Q8TB33 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
LINC01560Q8TB33 RNU4-20P-201ENST00000365601 151 ntBASIC1.33□□□□□ -2.2
LINC01560Q8TB33 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
LINC01560Q8TB33 MIR499A-201ENST00000384903 122 ntBASIC1.33□□□□□ -2.2
LINC01560Q8TB33 MIR597-201ENST00000384968 97 ntBASIC1.33□□□□□ -2.2
LINC01560Q8TB33 MIR29C-201ENST00000385231 88 ntBASIC1.33□□□□□ -2.2
LINC01560Q8TB33 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.33□□□□□ -2.2
LINC01560Q8TB33 AL590556.1-201ENST00000423231 483 ntBASIC1.33□□□□□ -2.2
LINC01560Q8TB33 AL353689.1-201ENST00000438895 199 ntBASIC1.33□□□□□ -2.2
LINC01560Q8TB33 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.33□□□□□ -2.2
LINC01560Q8TB33 DNAJC19P4-201ENST00000440115 345 ntBASIC1.33□□□□□ -2.2
LINC01560Q8TB33 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.33□□□□□ -2.2
LINC01560Q8TB33 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.33□□□□□ -2.2
LINC01560Q8TB33 TPTE2P5-203ENST00000458118 728 ntBASIC1.33□□□□□ -2.2
LINC01560Q8TB33 AC083798.1-201ENST00000472671 131 ntBASIC1.33□□□□□ -2.2
LINC01560Q8TB33 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.33□□□□□ -2.2
LINC01560Q8TB33 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.33□□□□□ -2.2
LINC01560Q8TB33 SNORA14.1-201ENST00000516113 141 ntBASIC1.33□□□□□ -2.2
LINC01560Q8TB33 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.33□□□□□ -2.2
LINC01560Q8TB33 AP003034.1-201ENST00000534621 422 ntBASIC1.33□□□□□ -2.2
LINC01560Q8TB33 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.33□□□□□ -2.2
LINC01560Q8TB33 MIR4299-201ENST00000577899 72 ntBASIC1.33□□□□□ -2.2
LINC01560Q8TB33 MIR3136-201ENST00000583498 78 ntBASIC1.33□□□□□ -2.2
LINC01560Q8TB33 AC078795.3-201ENST00000602913 472 ntBASIC1.33□□□□□ -2.2
LINC01560Q8TB33 AP001836.1-201ENST00000604675 523 ntBASIC1.33□□□□□ -2.2
LINC01560Q8TB33 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.33□□□□□ -2.2
LINC01560Q8TB33 SDR42E1P4-201ENST00000620894 481 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms