Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
SYNE1Q8NF91 PRPS1P1-201ENST00000445305 876 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AL096829.2-201ENST00000446582 742 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AC007327.1-201ENST00000447461 264 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AC114982.1-201ENST00000469402 321 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.17□□□□□ -2.38
SYNE1Q8NF91 RNU6-917P-201ENST00000516294 104 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AC009878.1-201ENST00000621819 340 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC0.17□□□□□ -2.38
SYNE1Q8NF91 MTND4P16-201ENST00000466108 1367 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
SYNE1Q8NF91 MIR597-201ENST00000384968 97 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.17□□□□□ -2.38
SYNE1Q8NF91 ART2BP-201ENST00000453501 499 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AC016550.1-201ENST00000505348 785 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 RAB11AP2-201ENST00000545905 639 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.17□□□□□ -2.38
SYNE1Q8NF91 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AC090186.1-201ENST00000605991 572 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.17□□□□□ -2.38
SYNE1Q8NF91 AL357075.2-201ENST00000614906 189 ntBASIC0.17□□□□□ -2.38
SYNE1Q8NF91 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.17□□□□□ -2.38
SYNE1Q8NF91 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 HSBP1P2-201ENST00000299671 229 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 RNU6-23P-201ENST00000363283 107 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 RNU6-898P-201ENST00000365627 104 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 RNU6-622P-201ENST00000384272 103 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 ISCA1P1-201ENST00000426679 387 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AL606489.2-201ENST00000433886 234 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AC002486.1-201ENST00000435098 391 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 EEF1E1P1-201ENST00000446998 430 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.16□□□□□ -2.38
SYNE1Q8NF91 RNU6-572P-201ENST00000516724 80 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 RNU6-586P-201ENST00000517265 104 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AP000763.2-201ENST00000540641 163 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 ADI1P3-201ENST00000549509 470 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AL606834.3-201ENST00000602615 496 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AC091965.4-201ENST00000607691 587 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AL031667.3-201ENST00000620124 655 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 RNU6-271P-201ENST00000363858 105 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 RNU6-910P-201ENST00000390844 107 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AC119751.3-201ENST00000399720 670 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AL117342.1-201ENST00000404861 406 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AL358794.1-201ENST00000445689 381 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AC009237.7-201ENST00000447357 229 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AC117454.1-201ENST00000491120 168 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AC145146.1-201ENST00000496370 254 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 SNORA31.17-201ENST00000516953 127 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AP003355.1-201ENST00000518956 587 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AC122134.1-202ENST00000569111 1201 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 MIR4709-201ENST00000577272 72 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AL359697.1-201ENST00000624879 587 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 RNA5SP98-201ENST00000363158 137 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 Y_RNA.332-201ENST00000365271 113 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 RNU6-906P-201ENST00000384700 70 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AC084290.1-201ENST00000434995 374 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 PAXBP1P1-201ENST00000449315 447 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AC092001.1-201ENST00000453012 261 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 Y_RNA.672-201ENST00000516289 104 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AC025678.1-201ENST00000567861 338 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AC015688.6-201ENST00000577737 104 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 RSL24D1P11-201ENST00000591045 491 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC0.16□□□□□ -2.38
SYNE1Q8NF91 RNU6-560P-201ENST00000364007 108 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.16□□□□□ -2.38
SYNE1Q8NF91 C8orf59P1-201ENST00000429930 303 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.16□□□□□ -2.38
SYNE1Q8NF91 RNU6-333P-201ENST00000459117 107 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 RNU6-229P-201ENST00000516614 102 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AP001596.2-201ENST00000608410 312 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AC245297.2-201ENST00000610119 565 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 uc_338.11-201ENST00000619132 160 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 MIR302D-201ENST00000362275 68 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.16□□□□□ -2.38
SYNE1Q8NF91 RNU6-723P-201ENST00000383973 107 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 MIR1468-201ENST00000410600 86 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AC244098.3-201ENST00000424803 96 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 TIMM9P1-201ENST00000436122 256 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 MTND1P31-201ENST00000449206 961 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AC010620.1-201ENST00000601088 1102 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AC021171.1-201ENST00000603137 706 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AC004492.1-201ENST00000607036 742 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AC092106.3-201ENST00000611308 722 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 RNU6-1280P-201ENST00000365211 107 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 RNU6-769P-201ENST00000384407 104 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 RNU6-296P-201ENST00000384608 107 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms