Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 BX322639.1-202ENST00000423987 2213 ntBASIC3.27□□□□□ -1.89
HIPK4Q8NE63 AC000403.1-201ENST00000613696 3585 ntBASIC3.27□□□□□ -1.89
HIPK4Q8NE63 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
HIPK4Q8NE63 SNORD114-19-201ENST00000363072 75 ntBASIC3.27□□□□□ -1.89
HIPK4Q8NE63 Y_RNA.352-201ENST00000365439 102 ntBASIC3.27□□□□□ -1.89
HIPK4Q8NE63 CBX3P9-201ENST00000402326 552 ntBASIC3.27□□□□□ -1.89
HIPK4Q8NE63 AL603910.2-201ENST00000407268 136 ntBASIC3.27□□□□□ -1.89
HIPK4Q8NE63 HMGN2P31-201ENST00000432430 273 ntBASIC3.27□□□□□ -1.89
HIPK4Q8NE63 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.27□□□□□ -1.89
HIPK4Q8NE63 AC073901.1-201ENST00000462471 408 ntBASIC3.27□□□□□ -1.89
HIPK4Q8NE63 AC006445.1-201ENST00000491925 405 ntBASIC3.27□□□□□ -1.89
HIPK4Q8NE63 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.27□□□□□ -1.89
HIPK4Q8NE63 AC010999.1-201ENST00000611856 324 ntBASIC3.27□□□□□ -1.89
HIPK4Q8NE63 AC127459.3-201ENST00000624328 466 ntBASIC3.27□□□□□ -1.89
HIPK4Q8NE63 ZNF204P-201ENST00000416749 2397 ntBASIC3.27□□□□□ -1.89
HIPK4Q8NE63 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.26□□□□□ -1.89
HIPK4Q8NE63 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.26□□□□□ -1.89
HIPK4Q8NE63 Y_RNA.286-201ENST00000364813 102 ntBASIC3.26□□□□□ -1.89
HIPK4Q8NE63 RNU6-290P-201ENST00000365212 101 ntBASIC3.26□□□□□ -1.89
HIPK4Q8NE63 SNORD58.1-201ENST00000391313 66 ntBASIC3.26□□□□□ -1.89
HIPK4Q8NE63 MIR208B-201ENST00000401172 77 ntBASIC3.26□□□□□ -1.89
HIPK4Q8NE63 RNA5SP201-201ENST00000410316 124 ntBASIC3.26□□□□□ -1.89
HIPK4Q8NE63 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.26□□□□□ -1.89
HIPK4Q8NE63 RPL23AP70-201ENST00000483361 460 ntBASIC3.26□□□□□ -1.89
HIPK4Q8NE63 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.26□□□□□ -1.89
HIPK4Q8NE63 AC245166.1-201ENST00000521012 253 ntBASIC3.26□□□□□ -1.89
HIPK4Q8NE63 AK6P2-201ENST00000549020 471 ntBASIC3.26□□□□□ -1.89
HIPK4Q8NE63 MIR3923-201ENST00000579521 83 ntBASIC3.26□□□□□ -1.89
HIPK4Q8NE63 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.26□□□□□ -1.89
HIPK4Q8NE63 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HIPK4Q8NE63 AL356274.2-201ENST00000624379 3752 ntBASIC3.26□□□□□ -1.89
HIPK4Q8NE63 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HIPK4Q8NE63 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
HIPK4Q8NE63 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HIPK4Q8NE63 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HIPK4Q8NE63 RNU4-15P-201ENST00000362613 141 ntBASIC3.25□□□□□ -1.89
HIPK4Q8NE63 RNU4-90P-201ENST00000362773 141 ntBASIC3.25□□□□□ -1.89
HIPK4Q8NE63 RNU6-626P-201ENST00000363354 107 ntBASIC3.25□□□□□ -1.89
HIPK4Q8NE63 RNU4-56P-201ENST00000364700 142 ntBASIC3.25□□□□□ -1.89
HIPK4Q8NE63 RNU6-338P-201ENST00000383888 105 ntBASIC3.25□□□□□ -1.89
HIPK4Q8NE63 RNU6-20P-201ENST00000384106 107 ntBASIC3.25□□□□□ -1.89
HIPK4Q8NE63 RNU6-378P-201ENST00000384324 107 ntBASIC3.25□□□□□ -1.89
HIPK4Q8NE63 Y_RNA.515-201ENST00000384535 112 ntBASIC3.25□□□□□ -1.89
HIPK4Q8NE63 Y_RNA.570-201ENST00000384750 101 ntBASIC3.25□□□□□ -1.89
HIPK4Q8NE63 MIR186-201ENST00000384988 86 ntBASIC3.25□□□□□ -1.89
HIPK4Q8NE63 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
HIPK4Q8NE63 RNU4-30P-201ENST00000410245 143 ntBASIC3.25□□□□□ -1.89
HIPK4Q8NE63 RNU2-64P-201ENST00000411315 191 ntBASIC3.25□□□□□ -1.89
HIPK4Q8NE63 AC091179.1-201ENST00000461606 579 ntBASIC3.25□□□□□ -1.89
HIPK4Q8NE63 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
HIPK4Q8NE63 SNORA25.14-201ENST00000516481 132 ntBASIC3.25□□□□□ -1.89
HIPK4Q8NE63 SCARNA24.2-201ENST00000516968 130 ntBASIC3.25□□□□□ -1.89
HIPK4Q8NE63 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.25□□□□□ -1.89
HIPK4Q8NE63 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.25□□□□□ -1.89
HIPK4Q8NE63 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.25□□□□□ -1.89
HIPK4Q8NE63 AL356575.1-201ENST00000603008 283 ntBASIC3.25□□□□□ -1.89
HIPK4Q8NE63 MZT1P2-201ENST00000604387 248 ntBASIC3.25□□□□□ -1.89
HIPK4Q8NE63 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HIPK4Q8NE63 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
HIPK4Q8NE63 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.24□□□□□ -1.89
HIPK4Q8NE63 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.24□□□□□ -1.89
HIPK4Q8NE63 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
HIPK4Q8NE63 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.24□□□□□ -1.89
HIPK4Q8NE63 SNORD9-201ENST00000362566 104 ntBASIC3.24□□□□□ -1.89
HIPK4Q8NE63 RNU6-245P-201ENST00000384020 107 ntBASIC3.24□□□□□ -1.89
HIPK4Q8NE63 RNU2-14P-201ENST00000411053 191 ntBASIC3.24□□□□□ -1.89
HIPK4Q8NE63 RNU5A-5P-201ENST00000411054 116 ntBASIC3.24□□□□□ -1.89
HIPK4Q8NE63 ATP5A1P2-201ENST00000412323 255 ntBASIC3.24□□□□□ -1.89
HIPK4Q8NE63 DBIP2-201ENST00000419076 262 ntBASIC3.24□□□□□ -1.89
HIPK4Q8NE63 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.24□□□□□ -1.89
HIPK4Q8NE63 AC092017.2-201ENST00000427600 362 ntBASIC3.24□□□□□ -1.89
HIPK4Q8NE63 AC007395.1-201ENST00000451333 677 ntBASIC3.24□□□□□ -1.89
HIPK4Q8NE63 AL139109.1-201ENST00000455491 297 ntBASIC3.24□□□□□ -1.89
HIPK4Q8NE63 AC112771.1-201ENST00000463581 102 ntBASIC3.24□□□□□ -1.89
HIPK4Q8NE63 AL121594.1-201ENST00000475906 575 ntBASIC3.24□□□□□ -1.89
HIPK4Q8NE63 AC103975.1-201ENST00000482506 483 ntBASIC3.24□□□□□ -1.89
HIPK4Q8NE63 SERF1AP1-201ENST00000514575 187 ntBASIC3.24□□□□□ -1.89
HIPK4Q8NE63 RNU1-143P-201ENST00000516296 146 ntBASIC3.24□□□□□ -1.89
HIPK4Q8NE63 Y_RNA.683-201ENST00000516508 93 ntBASIC3.24□□□□□ -1.89
HIPK4Q8NE63 SNORA70.18-201ENST00000516696 98 ntBASIC3.24□□□□□ -1.89
HIPK4Q8NE63 RRN3P3-201ENST00000549207 578 ntBASIC3.24□□□□□ -1.89
HIPK4Q8NE63 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.24□□□□□ -1.89
HIPK4Q8NE63 SNORD113-5-201ENST00000607261 78 ntBASIC3.24□□□□□ -1.89
HIPK4Q8NE63 U1.23-201ENST00000610293 146 ntBASIC3.24□□□□□ -1.89
HIPK4Q8NE63 RNU1-68P-201ENST00000615382 146 ntBASIC3.24□□□□□ -1.89
HIPK4Q8NE63 U1.39-201ENST00000621562 146 ntBASIC3.24□□□□□ -1.89
HIPK4Q8NE63 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HIPK4Q8NE63 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.24□□□□□ -1.89
HIPK4Q8NE63 AC017071.1-201ENST00000564407 2204 ntBASIC3.23□□□□□ -1.89
HIPK4Q8NE63 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
HIPK4Q8NE63 RNU6-1266P-201ENST00000362794 105 ntBASIC3.23□□□□□ -1.89
HIPK4Q8NE63 RNA5SP51-201ENST00000364750 119 ntBASIC3.23□□□□□ -1.89
HIPK4Q8NE63 MIR767-201ENST00000390228 109 ntBASIC3.23□□□□□ -1.89
HIPK4Q8NE63 Y_RNA.595-201ENST00000410403 105 ntBASIC3.23□□□□□ -1.89
HIPK4Q8NE63 RN7SKP202-201ENST00000410439 330 ntBASIC3.23□□□□□ -1.89
HIPK4Q8NE63 AC009414.1-201ENST00000427200 443 ntBASIC3.23□□□□□ -1.89
HIPK4Q8NE63 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.23□□□□□ -1.89
HIPK4Q8NE63 AL358232.1-201ENST00000448030 501 ntBASIC3.23□□□□□ -1.89
HIPK4Q8NE63 AC117440.1-201ENST00000474107 571 ntBASIC3.23□□□□□ -1.89
HIPK4Q8NE63 AC091179.3-201ENST00000474761 144 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms