Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 AC092989.1-201ENST00000481235 277 ntBASIC1.9□□□□□ -2.11
CCDC197Q8NCU1 AC021146.2-201ENST00000504736 556 ntBASIC1.9□□□□□ -2.11
CCDC197Q8NCU1 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC197Q8NCU1 AC096745.1-201ENST00000509945 370 ntBASIC1.9□□□□□ -2.11
CCDC197Q8NCU1 PTP4A1P4-201ENST00000512479 322 ntBASIC1.9□□□□□ -2.11
CCDC197Q8NCU1 RNU6-1314P-201ENST00000517139 104 ntBASIC1.9□□□□□ -2.11
CCDC197Q8NCU1 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC197Q8NCU1 MIR3672-201ENST00000584290 82 ntBASIC1.9□□□□□ -2.11
CCDC197Q8NCU1 MIR3942-201ENST00000585264 109 ntBASIC1.9□□□□□ -2.11
CCDC197Q8NCU1 AC009994.1-201ENST00000606889 253 ntBASIC1.9□□□□□ -2.11
CCDC197Q8NCU1 AL136221.1-201ENST00000621449 509 ntBASIC1.9□□□□□ -2.11
CCDC197Q8NCU1 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CCDC197Q8NCU1 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 U3.9-201ENST00000363823 204 ntBASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 RNU6-743P-201ENST00000364151 106 ntBASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 SNORD14D-201ENST00000384390 87 ntBASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 Y_RNA.505-201ENST00000384489 102 ntBASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 MIR518A2-201ENST00000384966 87 ntBASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 AC012306.1-201ENST00000423267 114 ntBASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 AL590632.1-201ENST00000424289 371 ntBASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 AC006946.1-201ENST00000429106 328 ntBASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 RPS3AP12-201ENST00000443616 753 ntBASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 MTND1P11-201ENST00000456661 876 ntBASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 AC132942.1-201ENST00000486753 483 ntBASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 AC093259.1-201ENST00000509755 300 ntBASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 AC005741.1-201ENST00000511094 432 ntBASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 MIR449C-201ENST00000516047 92 ntBASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 RNU6-991P-201ENST00000516168 107 ntBASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 MIR4529-201ENST00000578110 78 ntBASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 AC023043.2-201ENST00000589678 1026 ntBASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 AC007229.1-201ENST00000590455 412 ntBASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 AC146944.4-201ENST00000602697 718 ntBASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 AC007179.3-201ENST00000604976 235 ntBASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 AP000654.2-201ENST00000605633 586 ntBASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 MIR8076-201ENST00000611401 83 ntBASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 Y_RNA.783-201ENST00000613546 102 ntBASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 AC007014.2-201ENST00000615581 479 ntBASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 CTSLP2-204ENST00000629029 392 ntBASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CCDC197Q8NCU1 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
CCDC197Q8NCU1 AC027514.1-201ENST00000588561 1603 ntBASIC1.88□□□□□ -2.11
CCDC197Q8NCU1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CCDC197Q8NCU1 AC062016.1-201ENST00000355719 319 ntBASIC1.88□□□□□ -2.11
CCDC197Q8NCU1 Y_RNA.123-201ENST00000363338 102 ntBASIC1.88□□□□□ -2.11
CCDC197Q8NCU1 Y_RNA.212-201ENST00000364177 102 ntBASIC1.88□□□□□ -2.11
CCDC197Q8NCU1 SNORA16.1-201ENST00000364597 132 ntBASIC1.88□□□□□ -2.11
CCDC197Q8NCU1 RNU6-234P-201ENST00000365229 104 ntBASIC1.88□□□□□ -2.11
CCDC197Q8NCU1 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
CCDC197Q8NCU1 RNU6-26P-201ENST00000383985 107 ntBASIC1.88□□□□□ -2.11
CCDC197Q8NCU1 SNORA29-201ENST00000384183 140 ntBASIC1.88□□□□□ -2.11
CCDC197Q8NCU1 MIR29C-201ENST00000385231 88 ntBASIC1.88□□□□□ -2.11
CCDC197Q8NCU1 SNORA40.19-201ENST00000390846 128 ntBASIC1.88□□□□□ -2.11
CCDC197Q8NCU1 AC009963.1-201ENST00000417265 157 ntBASIC1.88□□□□□ -2.11
CCDC197Q8NCU1 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.88□□□□□ -2.11
CCDC197Q8NCU1 EIF4A1P12-201ENST00000551910 141 ntBASIC1.88□□□□□ -2.11
CCDC197Q8NCU1 SNRPGP18-201ENST00000553000 214 ntBASIC1.88□□□□□ -2.11
CCDC197Q8NCU1 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.88□□□□□ -2.11
CCDC197Q8NCU1 AC109446.1-201ENST00000566172 220 ntBASIC1.88□□□□□ -2.11
CCDC197Q8NCU1 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC197Q8NCU1 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.88□□□□□ -2.11
CCDC197Q8NCU1 MIR4319-201ENST00000577285 85 ntBASIC1.88□□□□□ -2.11
CCDC197Q8NCU1 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.88□□□□□ -2.11
CCDC197Q8NCU1 AL109918.3-201ENST00000603072 338 ntBASIC1.88□□□□□ -2.11
CCDC197Q8NCU1 AL627230.6-201ENST00000611129 280 ntBASIC1.88□□□□□ -2.11
CCDC197Q8NCU1 AC006504.8-201ENST00000621046 635 ntBASIC1.88□□□□□ -2.11
CCDC197Q8NCU1 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.88□□□□□ -2.11
CCDC197Q8NCU1 AC100810.6-201ENST00000638068 285 ntBASIC1.88□□□□□ -2.11
CCDC197Q8NCU1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
CCDC197Q8NCU1 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CCDC197Q8NCU1 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CCDC197Q8NCU1 RNU5B-2P-201ENST00000363036 113 ntBASIC1.87□□□□□ -2.11
CCDC197Q8NCU1 Y_RNA.99-201ENST00000363138 105 ntBASIC1.87□□□□□ -2.11
CCDC197Q8NCU1 RNU6-1164P-201ENST00000364428 107 ntBASIC1.87□□□□□ -2.11
CCDC197Q8NCU1 RNU6-1286P-201ENST00000383871 107 ntBASIC1.87□□□□□ -2.11
CCDC197Q8NCU1 RNU6-784P-201ENST00000384330 106 ntBASIC1.87□□□□□ -2.11
CCDC197Q8NCU1 RNU6-933P-201ENST00000384424 107 ntBASIC1.87□□□□□ -2.11
CCDC197Q8NCU1 RNA5SP171-201ENST00000391071 115 ntBASIC1.87□□□□□ -2.11
CCDC197Q8NCU1 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CCDC197Q8NCU1 MIR208B-201ENST00000401172 77 ntBASIC1.87□□□□□ -2.11
CCDC197Q8NCU1 MIR1283-2-201ENST00000408621 87 ntBASIC1.87□□□□□ -2.11
CCDC197Q8NCU1 RN7SKP284-201ENST00000411002 343 ntBASIC1.87□□□□□ -2.11
CCDC197Q8NCU1 RNA5SP450-201ENST00000411206 102 ntBASIC1.87□□□□□ -2.11
CCDC197Q8NCU1 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.87□□□□□ -2.11
CCDC197Q8NCU1 AC009161.1-201ENST00000417306 376 ntBASIC1.87□□□□□ -2.11
CCDC197Q8NCU1 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.87□□□□□ -2.11
CCDC197Q8NCU1 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.87□□□□□ -2.11
CCDC197Q8NCU1 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC197Q8NCU1 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC197Q8NCU1 RNU6-864P-201ENST00000516256 108 ntBASIC1.87□□□□□ -2.11
CCDC197Q8NCU1 HSPE1P18-201ENST00000517602 280 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms