Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 Y_RNA.61-201ENST00000362835 102 ntBASIC2.74□□□□□ -1.97
HERC6Q8IVU3 RPL19P1-201ENST00000411635 428 ntBASIC2.74□□□□□ -1.97
HERC6Q8IVU3 DPH3P2-201ENST00000422618 250 ntBASIC2.74□□□□□ -1.97
HERC6Q8IVU3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.74□□□□□ -1.97
HERC6Q8IVU3 MTND3P23-201ENST00000431980 347 ntBASIC2.74□□□□□ -1.97
HERC6Q8IVU3 HMGB1P18-201ENST00000438801 619 ntBASIC2.74□□□□□ -1.97
HERC6Q8IVU3 AC011816.1-201ENST00000441346 546 ntBASIC2.74□□□□□ -1.97
HERC6Q8IVU3 AC093019.1-201ENST00000443135 252 ntBASIC2.74□□□□□ -1.97
HERC6Q8IVU3 MTND1P17-201ENST00000448961 204 ntBASIC2.74□□□□□ -1.97
HERC6Q8IVU3 HMGB1P35-201ENST00000503360 598 ntBASIC2.74□□□□□ -1.97
HERC6Q8IVU3 FGF7P4-201ENST00000509595 295 ntBASIC2.74□□□□□ -1.97
HERC6Q8IVU3 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.74□□□□□ -1.97
HERC6Q8IVU3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.74□□□□□ -1.97
HERC6Q8IVU3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.74□□□□□ -1.97
HERC6Q8IVU3 AC093249.1-201ENST00000567049 203 ntBASIC2.74□□□□□ -1.97
HERC6Q8IVU3 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.74□□□□□ -1.97
HERC6Q8IVU3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.74□□□□□ -1.97
HERC6Q8IVU3 AL034555.1-201ENST00000604816 211 ntBASIC2.74□□□□□ -1.97
HERC6Q8IVU3 AL132765.2-201ENST00000610812 351 ntBASIC2.74□□□□□ -1.97
HERC6Q8IVU3 AC009233.1-201ENST00000616477 371 ntBASIC2.74□□□□□ -1.97
HERC6Q8IVU3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.74□□□□□ -1.97
HERC6Q8IVU3 AL359697.1-201ENST00000624879 587 ntBASIC2.74□□□□□ -1.97
HERC6Q8IVU3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
HERC6Q8IVU3 RNU6-593P-201ENST00000364716 112 ntBASIC2.73□□□□□ -1.97
HERC6Q8IVU3 Y_RNA.356-201ENST00000365475 113 ntBASIC2.73□□□□□ -1.97
HERC6Q8IVU3 RNU6-482P-201ENST00000391068 107 ntBASIC2.73□□□□□ -1.97
HERC6Q8IVU3 AL603825.1-201ENST00000438481 80 ntBASIC2.73□□□□□ -1.97
HERC6Q8IVU3 AC090515.1-201ENST00000465295 476 ntBASIC2.73□□□□□ -1.97
HERC6Q8IVU3 AC105029.1-201ENST00000520250 669 ntBASIC2.73□□□□□ -1.97
HERC6Q8IVU3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.73□□□□□ -1.97
HERC6Q8IVU3 IMMP1LP2-201ENST00000552954 492 ntBASIC2.73□□□□□ -1.97
HERC6Q8IVU3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.73□□□□□ -1.97
HERC6Q8IVU3 MIR3923-201ENST00000579521 83 ntBASIC2.73□□□□□ -1.97
HERC6Q8IVU3 AC060766.3-201ENST00000591442 263 ntBASIC2.73□□□□□ -1.97
HERC6Q8IVU3 AC243960.4-201ENST00000600532 288 ntBASIC2.73□□□□□ -1.97
HERC6Q8IVU3 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.73□□□□□ -1.97
HERC6Q8IVU3 MIR6128-201ENST00000615528 109 ntBASIC2.73□□□□□ -1.97
HERC6Q8IVU3 TPTEP1-208ENST00000636884 213 ntBASIC2.73□□□□□ -1.97
HERC6Q8IVU3 AC131280.1-202ENST00000624067 4211 ntBASIC2.73□□□□□ -1.97
HERC6Q8IVU3 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
HERC6Q8IVU3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HERC6Q8IVU3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
HERC6Q8IVU3 RNU4-73P-201ENST00000363164 141 ntBASIC2.72□□□□□ -1.97
HERC6Q8IVU3 Y_RNA.123-201ENST00000363338 102 ntBASIC2.72□□□□□ -1.97
HERC6Q8IVU3 RNU1-109P-201ENST00000383960 147 ntBASIC2.72□□□□□ -1.97
HERC6Q8IVU3 Y_RNA.474-201ENST00000384341 102 ntBASIC2.72□□□□□ -1.97
HERC6Q8IVU3 Y_RNA.509-201ENST00000384506 99 ntBASIC2.72□□□□□ -1.97
HERC6Q8IVU3 MIR561-201ENST00000385216 97 ntBASIC2.72□□□□□ -1.97
HERC6Q8IVU3 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.72□□□□□ -1.97
HERC6Q8IVU3 AC007064.1-201ENST00000412238 351 ntBASIC2.72□□□□□ -1.97
HERC6Q8IVU3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.72□□□□□ -1.97
HERC6Q8IVU3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.72□□□□□ -1.97
HERC6Q8IVU3 RPS29P27-201ENST00000463711 170 ntBASIC2.72□□□□□ -1.97
HERC6Q8IVU3 AC234781.5-201ENST00000508429 271 ntBASIC2.72□□□□□ -1.97
HERC6Q8IVU3 MTND3P22-201ENST00000510932 243 ntBASIC2.72□□□□□ -1.97
HERC6Q8IVU3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.72□□□□□ -1.97
HERC6Q8IVU3 RNU6-277P-201ENST00000516272 106 ntBASIC2.72□□□□□ -1.97
HERC6Q8IVU3 AC004486.1-201ENST00000546846 233 ntBASIC2.72□□□□□ -1.97
HERC6Q8IVU3 AL713866.2-201ENST00000603579 219 ntBASIC2.72□□□□□ -1.97
HERC6Q8IVU3 MIR3976-201ENST00000606807 139 ntBASIC2.72□□□□□ -1.97
HERC6Q8IVU3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.72□□□□□ -1.97
HERC6Q8IVU3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HERC6Q8IVU3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HERC6Q8IVU3 MAPK10-266ENST00000641066 6555 ntBASIC2.71□□□□□ -1.97
HERC6Q8IVU3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HERC6Q8IVU3 AC069528.2-201ENST00000624849 1991 ntBASIC2.71□□□□□ -1.98
HERC6Q8IVU3 U8.8-201ENST00000365399 135 ntBASIC2.71□□□□□ -1.98
HERC6Q8IVU3 AL359511.1-201ENST00000402970 211 ntBASIC2.71□□□□□ -1.98
HERC6Q8IVU3 MIR548K-201ENST00000408406 116 ntBASIC2.71□□□□□ -1.98
HERC6Q8IVU3 HMGB3P2-201ENST00000411913 584 ntBASIC2.71□□□□□ -1.98
HERC6Q8IVU3 RPL37P10-201ENST00000412884 288 ntBASIC2.71□□□□□ -1.98
HERC6Q8IVU3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.71□□□□□ -1.98
HERC6Q8IVU3 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.71□□□□□ -1.98
HERC6Q8IVU3 Z82205.1-201ENST00000428456 297 ntBASIC2.71□□□□□ -1.98
HERC6Q8IVU3 HMGN2P3-201ENST00000433603 273 ntBASIC2.71□□□□□ -1.98
HERC6Q8IVU3 HMGN2P5-201ENST00000436882 273 ntBASIC2.71□□□□□ -1.98
HERC6Q8IVU3 RNU7-26P-201ENST00000458980 63 ntBASIC2.71□□□□□ -1.98
HERC6Q8IVU3 MTND5P5-201ENST00000503764 376 ntBASIC2.71□□□□□ -1.98
HERC6Q8IVU3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.71□□□□□ -1.98
HERC6Q8IVU3 RNU6-991P-201ENST00000516168 107 ntBASIC2.71□□□□□ -1.98
HERC6Q8IVU3 Y_RNA.691-201ENST00000516611 103 ntBASIC2.71□□□□□ -1.98
HERC6Q8IVU3 MIR1273D-201ENST00000577266 86 ntBASIC2.71□□□□□ -1.98
HERC6Q8IVU3 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.71□□□□□ -1.98
HERC6Q8IVU3 MIR4273-201ENST00000582824 84 ntBASIC2.71□□□□□ -1.98
HERC6Q8IVU3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.71□□□□□ -1.98
HERC6Q8IVU3 7SK.7-201ENST00000603504 247 ntBASIC2.71□□□□□ -1.98
HERC6Q8IVU3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.71□□□□□ -1.98
HERC6Q8IVU3 U4atac.1-201ENST00000618345 95 ntBASIC2.71□□□□□ -1.98
HERC6Q8IVU3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HERC6Q8IVU3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.7□□□□□ -1.98
HERC6Q8IVU3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
HERC6Q8IVU3 snoU2_19.1-201ENST00000362361 80 ntBASIC2.7□□□□□ -1.98
HERC6Q8IVU3 RNU1-72P-201ENST00000362976 153 ntBASIC2.7□□□□□ -1.98
HERC6Q8IVU3 RNA5SP125-201ENST00000364843 120 ntBASIC2.7□□□□□ -1.98
HERC6Q8IVU3 Y_RNA.339-201ENST00000365325 102 ntBASIC2.7□□□□□ -1.98
HERC6Q8IVU3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.7□□□□□ -1.98
HERC6Q8IVU3 RNU6-784P-201ENST00000384330 106 ntBASIC2.7□□□□□ -1.98
HERC6Q8IVU3 MIR95-201ENST00000385072 81 ntBASIC2.7□□□□□ -1.98
HERC6Q8IVU3 MIR548F5-201ENST00000408421 86 ntBASIC2.7□□□□□ -1.98
HERC6Q8IVU3 HMGN2P35-201ENST00000412164 270 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms