Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
VRK3Q8IV63 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
VRK3Q8IV63 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.09□□□□□ -1.91
VRK3Q8IV63 FTLP6-201ENST00000355274 422 ntBASIC3.09□□□□□ -1.91
VRK3Q8IV63 RNA5SP361-201ENST00000362686 118 ntBASIC3.09□□□□□ -1.91
VRK3Q8IV63 RNU6-527P-201ENST00000363425 104 ntBASIC3.09□□□□□ -1.91
VRK3Q8IV63 RNU6-1020P-201ENST00000363684 107 ntBASIC3.09□□□□□ -1.91
VRK3Q8IV63 Y_RNA.170-201ENST00000363746 110 ntBASIC3.09□□□□□ -1.91
VRK3Q8IV63 SNORD115-8-201ENST00000363856 82 ntBASIC3.09□□□□□ -1.91
VRK3Q8IV63 SNORD46.1-201ENST00000364139 104 ntBASIC3.09□□□□□ -1.91
VRK3Q8IV63 SNORD115-38-201ENST00000365037 82 ntBASIC3.09□□□□□ -1.91
VRK3Q8IV63 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.09□□□□□ -1.91
VRK3Q8IV63 RNU6-217P-201ENST00000384164 104 ntBASIC3.09□□□□□ -1.91
VRK3Q8IV63 RNU6-1145P-201ENST00000384246 107 ntBASIC3.09□□□□□ -1.91
VRK3Q8IV63 RNU6-140P-201ENST00000384566 108 ntBASIC3.09□□□□□ -1.91
VRK3Q8IV63 RNU6-159P-201ENST00000391080 106 ntBASIC3.09□□□□□ -1.91
VRK3Q8IV63 RNU4-30P-201ENST00000410245 143 ntBASIC3.09□□□□□ -1.91
VRK3Q8IV63 AC007969.2-201ENST00000441891 191 ntBASIC3.09□□□□□ -1.91
VRK3Q8IV63 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.09□□□□□ -1.91
VRK3Q8IV63 AC109925.1-201ENST00000478069 331 ntBASIC3.09□□□□□ -1.91
VRK3Q8IV63 AC097462.2-201ENST00000504623 481 ntBASIC3.09□□□□□ -1.91
VRK3Q8IV63 AC005921.1-201ENST00000510589 286 ntBASIC3.09□□□□□ -1.91
VRK3Q8IV63 RNU2-58P-201ENST00000516403 183 ntBASIC3.09□□□□□ -1.91
VRK3Q8IV63 RNU6-1282P-201ENST00000516735 96 ntBASIC3.09□□□□□ -1.91
VRK3Q8IV63 MIR5571-201ENST00000577998 113 ntBASIC3.09□□□□□ -1.91
VRK3Q8IV63 MIR3944-201ENST00000581277 108 ntBASIC3.09□□□□□ -1.91
VRK3Q8IV63 AC018692.3-201ENST00000623929 123 ntBASIC3.09□□□□□ -1.91
VRK3Q8IV63 AC021753.1-201ENST00000635724 168 ntBASIC3.09□□□□□ -1.91
VRK3Q8IV63 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
VRK3Q8IV63 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VRK3Q8IV63 RNU6-626P-201ENST00000363354 107 ntBASIC3.08□□□□□ -1.92
VRK3Q8IV63 Y_RNA.136-201ENST00000363444 102 ntBASIC3.08□□□□□ -1.92
VRK3Q8IV63 RNA5SP387-201ENST00000364226 106 ntBASIC3.08□□□□□ -1.92
VRK3Q8IV63 Y_RNA.240-201ENST00000364469 95 ntBASIC3.08□□□□□ -1.92
VRK3Q8IV63 RNA5SP189-201ENST00000364920 115 ntBASIC3.08□□□□□ -1.92
VRK3Q8IV63 SNORD50.2-201ENST00000365465 70 ntBASIC3.08□□□□□ -1.92
VRK3Q8IV63 SNORA70.4-201ENST00000365509 134 ntBASIC3.08□□□□□ -1.92
VRK3Q8IV63 Y_RNA.446-201ENST00000384178 104 ntBASIC3.08□□□□□ -1.92
VRK3Q8IV63 Y_RNA.570-201ENST00000384750 101 ntBASIC3.08□□□□□ -1.92
VRK3Q8IV63 MIR329-1-201ENST00000385028 80 ntBASIC3.08□□□□□ -1.92
VRK3Q8IV63 RNU6-918P-201ENST00000391219 106 ntBASIC3.08□□□□□ -1.92
VRK3Q8IV63 SNORA48.8-201ENST00000391324 134 ntBASIC3.08□□□□□ -1.92
VRK3Q8IV63 RNU2-61P-201ENST00000411069 191 ntBASIC3.08□□□□□ -1.92
VRK3Q8IV63 AL390729.2-201ENST00000416137 156 ntBASIC3.08□□□□□ -1.92
VRK3Q8IV63 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.08□□□□□ -1.92
VRK3Q8IV63 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.08□□□□□ -1.92
VRK3Q8IV63 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.08□□□□□ -1.92
VRK3Q8IV63 SNORD2.1-201ENST00000458762 69 ntBASIC3.08□□□□□ -1.92
VRK3Q8IV63 RPS29P26-201ENST00000477483 171 ntBASIC3.08□□□□□ -1.92
VRK3Q8IV63 RPL32P34-201ENST00000486380 400 ntBASIC3.08□□□□□ -1.92
VRK3Q8IV63 RNU1-103P-201ENST00000516502 125 ntBASIC3.08□□□□□ -1.92
VRK3Q8IV63 AC022559.1-201ENST00000520905 205 ntBASIC3.08□□□□□ -1.92
VRK3Q8IV63 CR383656.8-201ENST00000549046 145 ntBASIC3.08□□□□□ -1.92
VRK3Q8IV63 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.08□□□□□ -1.92
VRK3Q8IV63 UBL5P2-201ENST00000583788 219 ntBASIC3.08□□□□□ -1.92
VRK3Q8IV63 AL713866.2-201ENST00000603579 219 ntBASIC3.08□□□□□ -1.92
VRK3Q8IV63 YPEL5P2-201ENST00000605553 359 ntBASIC3.08□□□□□ -1.92
VRK3Q8IV63 AC107294.3-201ENST00000609211 526 ntBASIC3.08□□□□□ -1.92
VRK3Q8IV63 MIR6134-201ENST00000617606 109 ntBASIC3.08□□□□□ -1.92
VRK3Q8IV63 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.08□□□□□ -1.92
VRK3Q8IV63 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.08□□□□□ -1.92
VRK3Q8IV63 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
VRK3Q8IV63 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
VRK3Q8IV63 AC022336.2-201ENST00000568966 2538 ntBASIC3.08□□□□□ -1.92
VRK3Q8IV63 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.07□□□□□ -1.92
VRK3Q8IV63 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
VRK3Q8IV63 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
VRK3Q8IV63 SNORA31-201ENST00000362607 130 ntBASIC3.07□□□□□ -1.92
VRK3Q8IV63 Y_RNA.230-201ENST00000364348 109 ntBASIC3.07□□□□□ -1.92
VRK3Q8IV63 Y_RNA.233-201ENST00000364407 101 ntBASIC3.07□□□□□ -1.92
VRK3Q8IV63 SNORA7.2-201ENST00000364446 145 ntBASIC3.07□□□□□ -1.92
VRK3Q8IV63 Y_RNA.435-201ENST00000384095 112 ntBASIC3.07□□□□□ -1.92
VRK3Q8IV63 SNORA7.4-201ENST00000384249 137 ntBASIC3.07□□□□□ -1.92
VRK3Q8IV63 MIR613-201ENST00000385248 95 ntBASIC3.07□□□□□ -1.92
VRK3Q8IV63 SNORA11.1-201ENST00000408133 129 ntBASIC3.07□□□□□ -1.92
VRK3Q8IV63 RNU6-394P-201ENST00000410735 107 ntBASIC3.07□□□□□ -1.92
VRK3Q8IV63 RNU4-47P-201ENST00000410876 114 ntBASIC3.07□□□□□ -1.92
VRK3Q8IV63 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.07□□□□□ -1.92
VRK3Q8IV63 Y_RNA.638-201ENST00000459374 113 ntBASIC3.07□□□□□ -1.92
VRK3Q8IV63 AC117440.1-201ENST00000474107 571 ntBASIC3.07□□□□□ -1.92
VRK3Q8IV63 RPL30P5-201ENST00000494923 336 ntBASIC3.07□□□□□ -1.92
VRK3Q8IV63 AC078918.1-201ENST00000498515 228 ntBASIC3.07□□□□□ -1.92
VRK3Q8IV63 RNU7-200P-201ENST00000516105 62 ntBASIC3.07□□□□□ -1.92
VRK3Q8IV63 SNORA27.4-201ENST00000516650 95 ntBASIC3.07□□□□□ -1.92
VRK3Q8IV63 RNU6-567P-201ENST00000516746 107 ntBASIC3.07□□□□□ -1.92
VRK3Q8IV63 RN7SKP289-201ENST00000517244 295 ntBASIC3.07□□□□□ -1.92
VRK3Q8IV63 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
VRK3Q8IV63 AC096577.2-201ENST00000611455 153 ntBASIC3.07□□□□□ -1.92
VRK3Q8IV63 AC005296.1-201ENST00000616145 209 ntBASIC3.07□□□□□ -1.92
VRK3Q8IV63 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
VRK3Q8IV63 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
VRK3Q8IV63 AL359854.1-201ENST00000614203 1594 ntBASIC3.07□□□□□ -1.92
VRK3Q8IV63 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.07□□□□□ -1.92
VRK3Q8IV63 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
VRK3Q8IV63 MIR410-201ENST00000362222 80 ntBASIC3.06□□□□□ -1.92
VRK3Q8IV63 RNU6-704P-201ENST00000364162 103 ntBASIC3.06□□□□□ -1.92
VRK3Q8IV63 RNU6-805P-201ENST00000365643 106 ntBASIC3.06□□□□□ -1.92
VRK3Q8IV63 RNU6-142P-201ENST00000384019 107 ntBASIC3.06□□□□□ -1.92
VRK3Q8IV63 Y_RNA.418-201ENST00000384029 102 ntBASIC3.06□□□□□ -1.92
VRK3Q8IV63 RNU6-20P-201ENST00000384106 107 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms