Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AL773545.4-201ENST00000637262 310 ntBASIC4.35□□□□□ -1.71
TRIM50Q86XT4 AL513478.4-201ENST00000641636 310 ntBASIC4.35□□□□□ -1.71
TRIM50Q86XT4 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM50Q86XT4 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM50Q86XT4 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.35□□□□□ -1.71
TRIM50Q86XT4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM50Q86XT4 RNU6-81P-201ENST00000365608 104 ntBASIC4.34□□□□□ -1.71
TRIM50Q86XT4 RNU6-449P-201ENST00000383914 107 ntBASIC4.34□□□□□ -1.71
TRIM50Q86XT4 RNU6-1081P-201ENST00000384537 107 ntBASIC4.34□□□□□ -1.71
TRIM50Q86XT4 MIR200C-201ENST00000384980 68 ntBASIC4.34□□□□□ -1.71
TRIM50Q86XT4 Y_RNA.580-201ENST00000391004 95 ntBASIC4.34□□□□□ -1.71
TRIM50Q86XT4 MIR1251-201ENST00000408552 70 ntBASIC4.34□□□□□ -1.71
TRIM50Q86XT4 AL139247.1-201ENST00000422768 325 ntBASIC4.34□□□□□ -1.71
TRIM50Q86XT4 MIR6075-201ENST00000620782 95 ntBASIC4.34□□□□□ -1.71
TRIM50Q86XT4 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM50Q86XT4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM50Q86XT4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM50Q86XT4 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.34□□□□□ -1.72
TRIM50Q86XT4 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
TRIM50Q86XT4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM50Q86XT4 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.33□□□□□ -1.72
TRIM50Q86XT4 AC093578.1-201ENST00000415219 368 ntBASIC4.33□□□□□ -1.72
TRIM50Q86XT4 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM50Q86XT4 HMGN2P20-201ENST00000437531 273 ntBASIC4.33□□□□□ -1.72
TRIM50Q86XT4 RNU6-344P-201ENST00000516635 111 ntBASIC4.33□□□□□ -1.72
TRIM50Q86XT4 AC022695.1-201ENST00000522089 237 ntBASIC4.33□□□□□ -1.72
TRIM50Q86XT4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM50Q86XT4 GNRHR2P1-201ENST00000555315 631 ntBASIC4.33□□□□□ -1.72
TRIM50Q86XT4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM50Q86XT4 AC068205.3-201ENST00000636385 468 ntBASIC4.33□□□□□ -1.72
TRIM50Q86XT4 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM50Q86XT4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM50Q86XT4 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
TRIM50Q86XT4 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM50Q86XT4 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM50Q86XT4 MIR208A-201ENST00000362287 71 ntBASIC4.32□□□□□ -1.72
TRIM50Q86XT4 Y_RNA.357-201ENST00000365487 109 ntBASIC4.32□□□□□ -1.72
TRIM50Q86XT4 SNORA5A-201ENST00000384111 134 ntBASIC4.32□□□□□ -1.72
TRIM50Q86XT4 RNU6-750P-201ENST00000390946 107 ntBASIC4.32□□□□□ -1.72
TRIM50Q86XT4 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.32□□□□□ -1.72
TRIM50Q86XT4 SNORA3.3-201ENST00000408712 125 ntBASIC4.32□□□□□ -1.72
TRIM50Q86XT4 RNA5SP38-201ENST00000410750 119 ntBASIC4.32□□□□□ -1.72
TRIM50Q86XT4 SEPT7P4-201ENST00000437076 306 ntBASIC4.32□□□□□ -1.72
TRIM50Q86XT4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM50Q86XT4 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.32□□□□□ -1.72
TRIM50Q86XT4 RPS20P10-201ENST00000451209 253 ntBASIC4.32□□□□□ -1.72
TRIM50Q86XT4 AC112771.1-201ENST00000463581 102 ntBASIC4.32□□□□□ -1.72
TRIM50Q86XT4 RPS27AP9-201ENST00000477681 438 ntBASIC4.32□□□□□ -1.72
TRIM50Q86XT4 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM50Q86XT4 RNU1-95P-201ENST00000516357 160 ntBASIC4.32□□□□□ -1.72
TRIM50Q86XT4 RNA5SP309-201ENST00000516670 106 ntBASIC4.32□□□□□ -1.72
TRIM50Q86XT4 RNU1-128P-201ENST00000516704 160 ntBASIC4.32□□□□□ -1.72
TRIM50Q86XT4 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.32□□□□□ -1.72
TRIM50Q86XT4 AC244505.7-201ENST00000599675 272 ntBASIC4.32□□□□□ -1.72
TRIM50Q86XT4 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM50Q86XT4 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM50Q86XT4 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM50Q86XT4 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM50Q86XT4 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM50Q86XT4 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM50Q86XT4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.31□□□□□ -1.72
TRIM50Q86XT4 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.31□□□□□ -1.72
TRIM50Q86XT4 RNU6-655P-201ENST00000362858 107 ntBASIC4.31□□□□□ -1.72
TRIM50Q86XT4 RNU6-312P-201ENST00000364629 107 ntBASIC4.31□□□□□ -1.72
TRIM50Q86XT4 Y_RNA.343-201ENST00000365354 112 ntBASIC4.31□□□□□ -1.72
TRIM50Q86XT4 AL031003.1-201ENST00000404229 172 ntBASIC4.31□□□□□ -1.72
TRIM50Q86XT4 SNORA3C-201ENST00000408792 125 ntBASIC4.31□□□□□ -1.72
TRIM50Q86XT4 RN7SL271P-201ENST00000487601 295 ntBASIC4.31□□□□□ -1.72
TRIM50Q86XT4 HSPE1P18-201ENST00000517602 280 ntBASIC4.31□□□□□ -1.72
TRIM50Q86XT4 AC026403.1-201ENST00000518938 295 ntBASIC4.31□□□□□ -1.72
TRIM50Q86XT4 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM50Q86XT4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.31□□□□□ -1.72
TRIM50Q86XT4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM50Q86XT4 UBE3AP2-201ENST00000429033 2259 ntBASIC4.31□□□□□ -1.72
TRIM50Q86XT4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM50Q86XT4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM50Q86XT4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.31□□□□□ -1.72
TRIM50Q86XT4 ZNF962P-201ENST00000443465 3140 ntBASIC4.3□□□□□ -1.72
TRIM50Q86XT4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM50Q86XT4 AF127577.6-201ENST00000623352 2191 ntBASIC4.3□□□□□ -1.72
TRIM50Q86XT4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM50Q86XT4 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM50Q86XT4 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM50Q86XT4 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
TRIM50Q86XT4 snoU2_19.1-201ENST00000362361 80 ntBASIC4.3□□□□□ -1.72
TRIM50Q86XT4 Y_RNA.23-201ENST00000362496 106 ntBASIC4.3□□□□□ -1.72
TRIM50Q86XT4 Y_RNA.121-201ENST00000363309 113 ntBASIC4.3□□□□□ -1.72
TRIM50Q86XT4 RNU6-1210P-201ENST00000363775 107 ntBASIC4.3□□□□□ -1.72
TRIM50Q86XT4 RNU6-801P-201ENST00000364087 105 ntBASIC4.3□□□□□ -1.72
TRIM50Q86XT4 SNORA70.4-201ENST00000365509 134 ntBASIC4.3□□□□□ -1.72
TRIM50Q86XT4 MIR449B-201ENST00000384995 97 ntBASIC4.3□□□□□ -1.72
TRIM50Q86XT4 RNA5SP504-201ENST00000410676 117 ntBASIC4.3□□□□□ -1.72
TRIM50Q86XT4 YME1L1P1-201ENST00000429435 297 ntBASIC4.3□□□□□ -1.72
TRIM50Q86XT4 AL135790.2-201ENST00000437701 267 ntBASIC4.3□□□□□ -1.72
TRIM50Q86XT4 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM50Q86XT4 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM50Q86XT4 snoU13.22-201ENST00000459428 104 ntBASIC4.3□□□□□ -1.72
TRIM50Q86XT4 AL133162.1-201ENST00000463228 453 ntBASIC4.3□□□□□ -1.72
TRIM50Q86XT4 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM50Q86XT4 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 234.6 ms