Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.07□□□□□ -1.92
KRT28Q7Z3Y7 RPL7P42-201ENST00000481005 679 ntBASIC3.07□□□□□ -1.92
KRT28Q7Z3Y7 AC087190.1-201ENST00000484462 480 ntBASIC3.07□□□□□ -1.92
KRT28Q7Z3Y7 AC093591.1-201ENST00000491435 481 ntBASIC3.07□□□□□ -1.92
KRT28Q7Z3Y7 RPL21P16-201ENST00000495531 483 ntBASIC3.07□□□□□ -1.92
KRT28Q7Z3Y7 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.07□□□□□ -1.92
KRT28Q7Z3Y7 RNA5SP445-201ENST00000515889 115 ntBASIC3.07□□□□□ -1.92
KRT28Q7Z3Y7 RNU6-295P-201ENST00000516901 104 ntBASIC3.07□□□□□ -1.92
KRT28Q7Z3Y7 RNU6-1213P-201ENST00000517075 94 ntBASIC3.07□□□□□ -1.92
KRT28Q7Z3Y7 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.07□□□□□ -1.92
KRT28Q7Z3Y7 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.07□□□□□ -1.92
KRT28Q7Z3Y7 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.07□□□□□ -1.92
KRT28Q7Z3Y7 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.07□□□□□ -1.92
KRT28Q7Z3Y7 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.07□□□□□ -1.92
KRT28Q7Z3Y7 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.07□□□□□ -1.92
KRT28Q7Z3Y7 AP001836.1-201ENST00000604675 523 ntBASIC3.07□□□□□ -1.92
KRT28Q7Z3Y7 uc_338.14-201ENST00000613162 166 ntBASIC3.07□□□□□ -1.92
KRT28Q7Z3Y7 AC022140.2-201ENST00000623500 188 ntBASIC3.07□□□□□ -1.92
KRT28Q7Z3Y7 AL669831.3-213ENST00000636676 183 ntBASIC3.07□□□□□ -1.92
KRT28Q7Z3Y7 AC009541.1-201ENST00000438279 2662 ntBASIC3.06□□□□□ -1.92
KRT28Q7Z3Y7 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
KRT28Q7Z3Y7 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.06□□□□□ -1.92
KRT28Q7Z3Y7 U8.8-201ENST00000365399 135 ntBASIC3.06□□□□□ -1.92
KRT28Q7Z3Y7 RNU6-487P-201ENST00000365430 104 ntBASIC3.06□□□□□ -1.92
KRT28Q7Z3Y7 Y_RNA.508-201ENST00000384502 114 ntBASIC3.06□□□□□ -1.92
KRT28Q7Z3Y7 SNORA11.4-201ENST00000408823 129 ntBASIC3.06□□□□□ -1.92
KRT28Q7Z3Y7 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.06□□□□□ -1.92
KRT28Q7Z3Y7 SAR1AP4-201ENST00000429225 591 ntBASIC3.06□□□□□ -1.92
KRT28Q7Z3Y7 AC009296.1-201ENST00000443146 155 ntBASIC3.06□□□□□ -1.92
KRT28Q7Z3Y7 RPL31P41-201ENST00000477967 372 ntBASIC3.06□□□□□ -1.92
KRT28Q7Z3Y7 AP001025.1-201ENST00000486139 332 ntBASIC3.06□□□□□ -1.92
KRT28Q7Z3Y7 HMGN1P13-201ENST00000505795 138 ntBASIC3.06□□□□□ -1.92
KRT28Q7Z3Y7 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
KRT28Q7Z3Y7 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.06□□□□□ -1.92
KRT28Q7Z3Y7 AC090897.2-201ENST00000581715 130 ntBASIC3.06□□□□□ -1.92
KRT28Q7Z3Y7 AC011494.1-201ENST00000596454 237 ntBASIC3.06□□□□□ -1.92
KRT28Q7Z3Y7 AL627309.6-201ENST00000606857 840 ntBASIC3.06□□□□□ -1.92
KRT28Q7Z3Y7 RNU6-91P-201ENST00000607774 107 ntBASIC3.06□□□□□ -1.92
KRT28Q7Z3Y7 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.06□□□□□ -1.92
KRT28Q7Z3Y7 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
KRT28Q7Z3Y7 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
KRT28Q7Z3Y7 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
KRT28Q7Z3Y7 MIR21-201ENST00000362134 72 ntBASIC3.05□□□□□ -1.92
KRT28Q7Z3Y7 Y_RNA.123-201ENST00000363338 102 ntBASIC3.05□□□□□ -1.92
KRT28Q7Z3Y7 RNU6-596P-201ENST00000365395 98 ntBASIC3.05□□□□□ -1.92
KRT28Q7Z3Y7 Y_RNA.419-201ENST00000384041 102 ntBASIC3.05□□□□□ -1.92
KRT28Q7Z3Y7 Y_RNA.466-201ENST00000384294 113 ntBASIC3.05□□□□□ -1.92
KRT28Q7Z3Y7 SNORA26.9-201ENST00000391322 122 ntBASIC3.05□□□□□ -1.92
KRT28Q7Z3Y7 SNORD88.1-201ENST00000408684 91 ntBASIC3.05□□□□□ -1.92
KRT28Q7Z3Y7 AP000275.1-201ENST00000411943 390 ntBASIC3.05□□□□□ -1.92
KRT28Q7Z3Y7 CYCSP49-201ENST00000420810 319 ntBASIC3.05□□□□□ -1.92
KRT28Q7Z3Y7 RPL39P29-201ENST00000447779 157 ntBASIC3.05□□□□□ -1.92
KRT28Q7Z3Y7 RPL36AP48-201ENST00000485521 314 ntBASIC3.05□□□□□ -1.92
KRT28Q7Z3Y7 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.05□□□□□ -1.92
KRT28Q7Z3Y7 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.05□□□□□ -1.92
KRT28Q7Z3Y7 MTCO3P13-201ENST00000577757 781 ntBASIC3.05□□□□□ -1.92
KRT28Q7Z3Y7 RPS15AP11-201ENST00000594193 385 ntBASIC3.05□□□□□ -1.92
KRT28Q7Z3Y7 AP000942.3-201ENST00000603702 160 ntBASIC3.05□□□□□ -1.92
KRT28Q7Z3Y7 AL133255.1-201ENST00000606374 441 ntBASIC3.05□□□□□ -1.92
KRT28Q7Z3Y7 AC007792.1-201ENST00000623023 402 ntBASIC3.05□□□□□ -1.92
KRT28Q7Z3Y7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
KRT28Q7Z3Y7 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.05□□□□□ -1.92
KRT28Q7Z3Y7 AC099654.7-201ENST00000635788 2127 ntBASIC3.05□□□□□ -1.92
KRT28Q7Z3Y7 SNORD114-19-201ENST00000363072 75 ntBASIC3.04□□□□□ -1.92
KRT28Q7Z3Y7 RNU6-622P-201ENST00000384272 103 ntBASIC3.04□□□□□ -1.92
KRT28Q7Z3Y7 RNU6-1140P-201ENST00000410517 106 ntBASIC3.04□□□□□ -1.92
KRT28Q7Z3Y7 AC112771.1-201ENST00000463581 102 ntBASIC3.04□□□□□ -1.92
KRT28Q7Z3Y7 RPS29P27-201ENST00000463711 170 ntBASIC3.04□□□□□ -1.92
KRT28Q7Z3Y7 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.04□□□□□ -1.92
KRT28Q7Z3Y7 AC108729.3-201ENST00000513484 108 ntBASIC3.04□□□□□ -1.92
KRT28Q7Z3Y7 RNU6-307P-201ENST00000516743 106 ntBASIC3.04□□□□□ -1.92
KRT28Q7Z3Y7 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.04□□□□□ -1.92
KRT28Q7Z3Y7 MIR4765-201ENST00000585007 77 ntBASIC3.04□□□□□ -1.92
KRT28Q7Z3Y7 AC078795.3-201ENST00000602913 472 ntBASIC3.04□□□□□ -1.92
KRT28Q7Z3Y7 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.04□□□□□ -1.92
KRT28Q7Z3Y7 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
KRT28Q7Z3Y7 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
KRT28Q7Z3Y7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.03□□□□□ -1.92
KRT28Q7Z3Y7 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.03□□□□□ -1.92
KRT28Q7Z3Y7 Y_RNA.315-201ENST00000365117 102 ntBASIC3.03□□□□□ -1.92
KRT28Q7Z3Y7 Y_RNA.404-201ENST00000383978 102 ntBASIC3.03□□□□□ -1.92
KRT28Q7Z3Y7 RNU6-1083P-201ENST00000384022 107 ntBASIC3.03□□□□□ -1.92
KRT28Q7Z3Y7 RNU6-842P-201ENST00000384269 107 ntBASIC3.03□□□□□ -1.92
KRT28Q7Z3Y7 RNU6-1222P-201ENST00000384615 107 ntBASIC3.03□□□□□ -1.92
KRT28Q7Z3Y7 RNU6-310P-201ENST00000384655 107 ntBASIC3.03□□□□□ -1.92
KRT28Q7Z3Y7 RNU6-331P-201ENST00000384724 107 ntBASIC3.03□□□□□ -1.92
KRT28Q7Z3Y7 SNORA80E-201ENST00000384744 137 ntBASIC3.03□□□□□ -1.92
KRT28Q7Z3Y7 Y_RNA.595-201ENST00000410403 105 ntBASIC3.03□□□□□ -1.92
KRT28Q7Z3Y7 Y_RNA.646-201ENST00000410980 101 ntBASIC3.03□□□□□ -1.92
KRT28Q7Z3Y7 USMG5P1-201ENST00000425964 177 ntBASIC3.03□□□□□ -1.92
KRT28Q7Z3Y7 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.03□□□□□ -1.92
KRT28Q7Z3Y7 ELOCP24-201ENST00000456370 334 ntBASIC3.03□□□□□ -1.92
KRT28Q7Z3Y7 FO393415.2-201ENST00000480085 343 ntBASIC3.03□□□□□ -1.92
KRT28Q7Z3Y7 RPL22P13-201ENST00000493291 347 ntBASIC3.03□□□□□ -1.92
KRT28Q7Z3Y7 AC097473.1-201ENST00000508142 408 ntBASIC3.03□□□□□ -1.92
KRT28Q7Z3Y7 RNU6-1053P-201ENST00000515930 101 ntBASIC3.03□□□□□ -1.92
KRT28Q7Z3Y7 SCARNA17.1-201ENST00000516211 143 ntBASIC3.03□□□□□ -1.92
KRT28Q7Z3Y7 SCARNA17.2-201ENST00000516334 143 ntBASIC3.03□□□□□ -1.92
KRT28Q7Z3Y7 AC007375.1-201ENST00000554513 578 ntBASIC3.03□□□□□ -1.92
KRT28Q7Z3Y7 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms