Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.21□□□□□ -2.06
NUP54Q7Z3B4 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.21□□□□□ -2.06
NUP54Q7Z3B4 AL162373.1-201ENST00000620433 407 ntBASIC2.21□□□□□ -2.06
NUP54Q7Z3B4 AL450472.1-202ENST00000637286 180 ntBASIC2.21□□□□□ -2.06
NUP54Q7Z3B4 AC069528.2-201ENST00000624849 1991 ntBASIC2.21□□□□□ -2.06
NUP54Q7Z3B4 RNU4-82P-201ENST00000362443 140 ntBASIC2.2□□□□□ -2.06
NUP54Q7Z3B4 RNU1-23P-201ENST00000363361 144 ntBASIC2.2□□□□□ -2.06
NUP54Q7Z3B4 Y_RNA.504-201ENST00000384481 104 ntBASIC2.2□□□□□ -2.06
NUP54Q7Z3B4 SNORA67.4-201ENST00000384688 142 ntBASIC2.2□□□□□ -2.06
NUP54Q7Z3B4 MT-TL1-201ENST00000386347 75 ntBASIC2.2□□□□□ -2.06
NUP54Q7Z3B4 MTND3P8-201ENST00000412909 339 ntBASIC2.2□□□□□ -2.06
NUP54Q7Z3B4 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.2□□□□□ -2.06
NUP54Q7Z3B4 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.2□□□□□ -2.06
NUP54Q7Z3B4 PCMTD1P1-201ENST00000455560 355 ntBASIC2.2□□□□□ -2.06
NUP54Q7Z3B4 AC018868.1-201ENST00000491307 315 ntBASIC2.2□□□□□ -2.06
NUP54Q7Z3B4 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.2□□□□□ -2.06
NUP54Q7Z3B4 PRDX4P1-201ENST00000507189 574 ntBASIC2.2□□□□□ -2.06
NUP54Q7Z3B4 AC234781.5-201ENST00000508429 271 ntBASIC2.2□□□□□ -2.06
NUP54Q7Z3B4 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.2□□□□□ -2.06
NUP54Q7Z3B4 PTP4A1P4-201ENST00000512479 322 ntBASIC2.2□□□□□ -2.06
NUP54Q7Z3B4 RNA5SP454-201ENST00000517231 127 ntBASIC2.2□□□□□ -2.06
NUP54Q7Z3B4 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.2□□□□□ -2.06
NUP54Q7Z3B4 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.2□□□□□ -2.06
NUP54Q7Z3B4 AC018630.3-201ENST00000542637 96 ntBASIC2.2□□□□□ -2.06
NUP54Q7Z3B4 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.2□□□□□ -2.06
NUP54Q7Z3B4 AP002770.2-201ENST00000543613 532 ntBASIC2.2□□□□□ -2.06
NUP54Q7Z3B4 MIR4742-201ENST00000581069 85 ntBASIC2.2□□□□□ -2.06
NUP54Q7Z3B4 AC091932.3-201ENST00000624223 323 ntBASIC2.2□□□□□ -2.06
NUP54Q7Z3B4 IGHVIII-44-202ENST00000636235 289 ntBASIC2.2□□□□□ -2.06
NUP54Q7Z3B4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.2□□□□□ -2.06
NUP54Q7Z3B4 ZNF658B-202ENST00000615961 3375 ntBASIC2.19□□□□□ -2.06
NUP54Q7Z3B4 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
NUP54Q7Z3B4 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
NUP54Q7Z3B4 RNU4-15P-201ENST00000362613 141 ntBASIC2.19□□□□□ -2.06
NUP54Q7Z3B4 Y_RNA.151-201ENST00000363566 112 ntBASIC2.19□□□□□ -2.06
NUP54Q7Z3B4 Y_RNA.279-201ENST00000364763 95 ntBASIC2.19□□□□□ -2.06
NUP54Q7Z3B4 SNORA80E-201ENST00000384744 137 ntBASIC2.19□□□□□ -2.06
NUP54Q7Z3B4 MIR521-1-201ENST00000384902 87 ntBASIC2.19□□□□□ -2.06
NUP54Q7Z3B4 SNORA46.1-201ENST00000391069 153 ntBASIC2.19□□□□□ -2.06
NUP54Q7Z3B4 RNU6-876P-201ENST00000391295 104 ntBASIC2.19□□□□□ -2.06
NUP54Q7Z3B4 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
NUP54Q7Z3B4 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.19□□□□□ -2.06
NUP54Q7Z3B4 DAP3P1-201ENST00000441522 278 ntBASIC2.19□□□□□ -2.06
NUP54Q7Z3B4 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.19□□□□□ -2.06
NUP54Q7Z3B4 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.19□□□□□ -2.06
NUP54Q7Z3B4 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.19□□□□□ -2.06
NUP54Q7Z3B4 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.19□□□□□ -2.06
NUP54Q7Z3B4 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.19□□□□□ -2.06
NUP54Q7Z3B4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.19□□□□□ -2.06
NUP54Q7Z3B4 AC046134.1-201ENST00000514454 666 ntBASIC2.19□□□□□ -2.06
NUP54Q7Z3B4 RNU6-567P-201ENST00000516746 107 ntBASIC2.19□□□□□ -2.06
NUP54Q7Z3B4 RNU6-273P-201ENST00000516937 96 ntBASIC2.19□□□□□ -2.06
NUP54Q7Z3B4 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.19□□□□□ -2.06
NUP54Q7Z3B4 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.19□□□□□ -2.06
NUP54Q7Z3B4 AP000889.1-201ENST00000530968 660 ntBASIC2.19□□□□□ -2.06
NUP54Q7Z3B4 AC026464.5-201ENST00000562497 722 ntBASIC2.19□□□□□ -2.06
NUP54Q7Z3B4 SNORD53-201ENST00000579969 78 ntBASIC2.19□□□□□ -2.06
NUP54Q7Z3B4 MIR4513-201ENST00000581077 86 ntBASIC2.19□□□□□ -2.06
NUP54Q7Z3B4 AL109918.3-201ENST00000603072 338 ntBASIC2.19□□□□□ -2.06
NUP54Q7Z3B4 AL627230.6-201ENST00000611129 280 ntBASIC2.19□□□□□ -2.06
NUP54Q7Z3B4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.19□□□□□ -2.06
NUP54Q7Z3B4 DUXAP9-208ENST00000622815 614 ntBASIC2.19□□□□□ -2.06
NUP54Q7Z3B4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
NUP54Q7Z3B4 CBX3P1-201ENST00000325243 554 ntBASIC2.18□□□□□ -2.06
NUP54Q7Z3B4 Y_RNA.160-201ENST00000363677 92 ntBASIC2.18□□□□□ -2.06
NUP54Q7Z3B4 RNU6-1283P-201ENST00000365314 105 ntBASIC2.18□□□□□ -2.06
NUP54Q7Z3B4 RNU6-546P-201ENST00000383991 107 ntBASIC2.18□□□□□ -2.06
NUP54Q7Z3B4 RNU6-611P-201ENST00000384276 104 ntBASIC2.18□□□□□ -2.06
NUP54Q7Z3B4 RNU6-790P-201ENST00000384479 105 ntBASIC2.18□□□□□ -2.06
NUP54Q7Z3B4 MTCYBP2-201ENST00000407745 171 ntBASIC2.18□□□□□ -2.06
NUP54Q7Z3B4 MTND1P23-201ENST00000416931 372 ntBASIC2.18□□□□□ -2.06
NUP54Q7Z3B4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.18□□□□□ -2.06
NUP54Q7Z3B4 CBX3P6-201ENST00000430257 527 ntBASIC2.18□□□□□ -2.06
NUP54Q7Z3B4 AL353689.1-201ENST00000438895 199 ntBASIC2.18□□□□□ -2.06
NUP54Q7Z3B4 MTND1P17-201ENST00000448961 204 ntBASIC2.18□□□□□ -2.06
NUP54Q7Z3B4 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.18□□□□□ -2.06
NUP54Q7Z3B4 RNU6-667P-201ENST00000517186 102 ntBASIC2.18□□□□□ -2.06
NUP54Q7Z3B4 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.18□□□□□ -2.06
NUP54Q7Z3B4 AP005639.2-201ENST00000527592 928 ntBASIC2.18□□□□□ -2.06
NUP54Q7Z3B4 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.18□□□□□ -2.06
NUP54Q7Z3B4 AC233702.2-202ENST00000562547 291 ntBASIC2.18□□□□□ -2.06
NUP54Q7Z3B4 MIR3923-201ENST00000579521 83 ntBASIC2.18□□□□□ -2.06
NUP54Q7Z3B4 AL078605.1-201ENST00000603529 500 ntBASIC2.18□□□□□ -2.06
NUP54Q7Z3B4 AC124303.1-201ENST00000605703 360 ntBASIC2.18□□□□□ -2.06
NUP54Q7Z3B4 AC103810.6-201ENST00000606708 136 ntBASIC2.18□□□□□ -2.06
NUP54Q7Z3B4 MIR3976-201ENST00000606807 139 ntBASIC2.18□□□□□ -2.06
NUP54Q7Z3B4 AC099654.14-201ENST00000638599 341 ntBASIC2.18□□□□□ -2.06
NUP54Q7Z3B4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
NUP54Q7Z3B4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.18□□□□□ -2.06
NUP54Q7Z3B4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
NUP54Q7Z3B4 Y_RNA.123-201ENST00000363338 102 ntBASIC2.17□□□□□ -2.06
NUP54Q7Z3B4 RNU6-944P-201ENST00000364023 107 ntBASIC2.17□□□□□ -2.06
NUP54Q7Z3B4 RNU6-767P-201ENST00000384132 107 ntBASIC2.17□□□□□ -2.06
NUP54Q7Z3B4 RNU6-784P-201ENST00000384330 106 ntBASIC2.17□□□□□ -2.06
NUP54Q7Z3B4 MIR518A2-201ENST00000384966 87 ntBASIC2.17□□□□□ -2.06
NUP54Q7Z3B4 MIR517A-201ENST00000385001 87 ntBASIC2.17□□□□□ -2.06
NUP54Q7Z3B4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
NUP54Q7Z3B4 RN7SKP32-201ENST00000410167 303 ntBASIC2.17□□□□□ -2.06
NUP54Q7Z3B4 RNA5SP201-201ENST00000410316 124 ntBASIC2.17□□□□□ -2.06
NUP54Q7Z3B4 Y_RNA.597-201ENST00000410463 100 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms