Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 AL353752.1-201ENST00000454946 260 ntBASIC-0.61□□□□□ -2.51
CCDC18Q5T9S5 snoU13.21-201ENST00000459368 105 ntBASIC-0.61□□□□□ -2.51
CCDC18Q5T9S5 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC-0.61□□□□□ -2.51
CCDC18Q5T9S5 AC025449.1-201ENST00000603896 529 ntBASIC-0.61□□□□□ -2.51
CCDC18Q5T9S5 AL161798.1-201ENST00000604630 131 ntBASIC-0.61□□□□□ -2.51
CCDC18Q5T9S5 RNY4P24-201ENST00000362735 96 ntBASIC-0.62□□□□□ -2.51
CCDC18Q5T9S5 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.62□□□□□ -2.51
CCDC18Q5T9S5 AC060773.1-201ENST00000421698 310 ntBASIC-0.62□□□□□ -2.51
CCDC18Q5T9S5 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.62□□□□□ -2.51
CCDC18Q5T9S5 MTND5P13-201ENST00000513046 1079 ntBASIC-0.62□□□□□ -2.51
CCDC18Q5T9S5 RNU6-922P-201ENST00000516753 99 ntBASIC-0.62□□□□□ -2.51
CCDC18Q5T9S5 AC136618.2-201ENST00000575091 400 ntBASIC-0.62□□□□□ -2.51
CCDC18Q5T9S5 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.62□□□□□ -2.51
CCDC18Q5T9S5 AP001981.2-201ENST00000603241 418 ntBASIC-0.62□□□□□ -2.51
CCDC18Q5T9S5 AC104985.3-201ENST00000623479 597 ntBASIC-0.62□□□□□ -2.51
CCDC18Q5T9S5 ISCA1P1-201ENST00000426679 387 ntBASIC-0.63□□□□□ -2.51
CCDC18Q5T9S5 BTF3P15-201ENST00000455606 336 ntBASIC-0.63□□□□□ -2.51
CCDC18Q5T9S5 AC009646.1-201ENST00000510455 318 ntBASIC-0.63□□□□□ -2.51
CCDC18Q5T9S5 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC-0.63□□□□□ -2.51
CCDC18Q5T9S5 AC064807.4-201ENST00000607201 407 ntBASIC-0.63□□□□□ -2.51
CCDC18Q5T9S5 AL136317.1-201ENST00000612653 226 ntBASIC-0.63□□□□□ -2.51
CCDC18Q5T9S5 AC136475.10-201ENST00000620253 385 ntBASIC-0.63□□□□□ -2.51
CCDC18Q5T9S5 uc_338.36-201ENST00000622331 158 ntBASIC-0.63□□□□□ -2.51
CCDC18Q5T9S5 snoU2_19.1-201ENST00000362361 80 ntBASIC-0.64□□□□□ -2.51
CCDC18Q5T9S5 SNORA4.2-201ENST00000365313 147 ntBASIC-0.64□□□□□ -2.51
CCDC18Q5T9S5 RNU6-637P-201ENST00000384050 107 ntBASIC-0.64□□□□□ -2.51
CCDC18Q5T9S5 SNORA75.2-201ENST00000391138 150 ntBASIC-0.64□□□□□ -2.51
CCDC18Q5T9S5 SNORA75.3-201ENST00000391231 150 ntBASIC-0.64□□□□□ -2.51
CCDC18Q5T9S5 C1DP2-201ENST00000418167 426 ntBASIC-0.64□□□□□ -2.51
CCDC18Q5T9S5 MTCO2P1-201ENST00000424648 477 ntBASIC-0.64□□□□□ -2.51
CCDC18Q5T9S5 MTND2P21-201ENST00000436242 1042 ntBASIC-0.64□□□□□ -2.51
CCDC18Q5T9S5 C1DP4-201ENST00000455429 424 ntBASIC-0.64□□□□□ -2.51
CCDC18Q5T9S5 AC022364.2-201ENST00000457963 554 ntBASIC-0.64□□□□□ -2.51
CCDC18Q5T9S5 RNU6-863P-201ENST00000515989 104 ntBASIC-0.64□□□□□ -2.51
CCDC18Q5T9S5 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-0.64□□□□□ -2.51
CCDC18Q5T9S5 AC087685.1-201ENST00000587507 141 ntBASIC-0.64□□□□□ -2.51
CCDC18Q5T9S5 AL163051.2-201ENST00000618976 735 ntBASIC-0.64□□□□□ -2.51
CCDC18Q5T9S5 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC-0.64□□□□□ -2.51
CCDC18Q5T9S5 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.64□□□□□ -2.51
CCDC18Q5T9S5 AC119674.1-220ENST00000641502 1048 ntBASIC-0.64□□□□□ -2.51
CCDC18Q5T9S5 MTND4P5-201ENST00000435821 1374 ntBASIC-0.64□□□□□ -2.51
CCDC18Q5T9S5 Y_RNA.25-201ENST00000362528 102 ntBASIC-0.65□□□□□ -2.51
CCDC18Q5T9S5 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.65□□□□□ -2.51
CCDC18Q5T9S5 RNU6-1300P-201ENST00000391046 108 ntBASIC-0.65□□□□□ -2.51
CCDC18Q5T9S5 AC002486.1-201ENST00000435098 391 ntBASIC-0.65□□□□□ -2.51
CCDC18Q5T9S5 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC-0.65□□□□□ -2.51
CCDC18Q5T9S5 AC012308.1-201ENST00000451232 178 ntBASIC-0.65□□□□□ -2.51
CCDC18Q5T9S5 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.65□□□□□ -2.51
CCDC18Q5T9S5 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.65□□□□□ -2.51
CCDC18Q5T9S5 SNORA25.12-201ENST00000516202 82 ntBASIC-0.65□□□□□ -2.51
CCDC18Q5T9S5 AL391001.1-201ENST00000602747 715 ntBASIC-0.65□□□□□ -2.51
CCDC18Q5T9S5 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.66□□□□□ -2.51
CCDC18Q5T9S5 VPS26BP1-201ENST00000417155 755 ntBASIC-0.66□□□□□ -2.51
CCDC18Q5T9S5 MTCO2P34-201ENST00000421994 607 ntBASIC-0.66□□□□□ -2.51
CCDC18Q5T9S5 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC-0.66□□□□□ -2.51
CCDC18Q5T9S5 SEPT7P5-201ENST00000434048 306 ntBASIC-0.66□□□□□ -2.51
CCDC18Q5T9S5 SEPT7P4-201ENST00000437076 306 ntBASIC-0.66□□□□□ -2.51
CCDC18Q5T9S5 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-0.66□□□□□ -2.51
CCDC18Q5T9S5 AC114811.1-201ENST00000507207 168 ntBASIC-0.66□□□□□ -2.51
CCDC18Q5T9S5 HMGB1P28-201ENST00000507778 552 ntBASIC-0.66□□□□□ -2.51
CCDC18Q5T9S5 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-0.66□□□□□ -2.51
CCDC18Q5T9S5 BNIP3P24-201ENST00000593398 557 ntBASIC-0.66□□□□□ -2.51
CCDC18Q5T9S5 AC078795.2-201ENST00000602835 1252 ntBASIC-0.66□□□□□ -2.51
CCDC18Q5T9S5 MIR548AZ-201ENST00000616567 95 ntBASIC-0.66□□□□□ -2.51
CCDC18Q5T9S5 AC092634.7-201ENST00000621022 103 ntBASIC-0.66□□□□□ -2.51
CCDC18Q5T9S5 SUGT1P1-201ENST00000379514 476 ntBASIC-0.67□□□□□ -2.52
CCDC18Q5T9S5 MTATP6P27-201ENST00000416987 621 ntBASIC-0.67□□□□□ -2.52
CCDC18Q5T9S5 RPS15AP10-201ENST00000432472 382 ntBASIC-0.67□□□□□ -2.52
CCDC18Q5T9S5 RNU7-34P-201ENST00000459394 64 ntBASIC-0.67□□□□□ -2.52
CCDC18Q5T9S5 AC027338.1-201ENST00000514840 825 ntBASIC-0.67□□□□□ -2.52
CCDC18Q5T9S5 RNU6-416P-201ENST00000516265 103 ntBASIC-0.67□□□□□ -2.52
CCDC18Q5T9S5 MIR5695-201ENST00000579717 85 ntBASIC-0.67□□□□□ -2.52
CCDC18Q5T9S5 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC-0.67□□□□□ -2.52
CCDC18Q5T9S5 MIR635-201ENST00000384830 98 ntBASIC-0.67□□□□□ -2.52
CCDC18Q5T9S5 MIR643-201ENST00000385267 97 ntBASIC-0.67□□□□□ -2.52
CCDC18Q5T9S5 AC068533.2-201ENST00000411872 306 ntBASIC-0.67□□□□□ -2.52
CCDC18Q5T9S5 AC104332.1-201ENST00000440471 797 ntBASIC-0.67□□□□□ -2.52
CCDC18Q5T9S5 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.67□□□□□ -2.52
CCDC18Q5T9S5 IGKV1-22-201ENST00000524313 326 ntBASIC-0.67□□□□□ -2.52
CCDC18Q5T9S5 AC092447.9-201ENST00000603395 144 ntBASIC-0.67□□□□□ -2.52
CCDC18Q5T9S5 RNU6-858P-201ENST00000362436 107 ntBASIC-0.68□□□□□ -2.52
CCDC18Q5T9S5 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC-0.68□□□□□ -2.52
CCDC18Q5T9S5 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC-0.68□□□□□ -2.52
CCDC18Q5T9S5 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-0.68□□□□□ -2.52
CCDC18Q5T9S5 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.68□□□□□ -2.52
CCDC18Q5T9S5 AC090502.2-201ENST00000549267 280 ntBASIC-0.68□□□□□ -2.52
CCDC18Q5T9S5 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-0.68□□□□□ -2.52
CCDC18Q5T9S5 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC-0.68□□□□□ -2.52
CCDC18Q5T9S5 MIR340-201ENST00000362125 95 ntBASIC-0.69□□□□□ -2.52
CCDC18Q5T9S5 SNORA1.1-201ENST00000364671 133 ntBASIC-0.69□□□□□ -2.52
CCDC18Q5T9S5 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.69□□□□□ -2.52
CCDC18Q5T9S5 AL034345.1-201ENST00000407768 123 ntBASIC-0.69□□□□□ -2.52
CCDC18Q5T9S5 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC-0.69□□□□□ -2.52
CCDC18Q5T9S5 GTF2IP3-201ENST00000433887 494 ntBASIC-0.69□□□□□ -2.52
CCDC18Q5T9S5 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-0.69□□□□□ -2.52
CCDC18Q5T9S5 RPL37P6-201ENST00000460682 294 ntBASIC-0.69□□□□□ -2.52
CCDC18Q5T9S5 RNU2-12P-201ENST00000517216 168 ntBASIC-0.69□□□□□ -2.52
CCDC18Q5T9S5 SUB1P2-201ENST00000556401 297 ntBASIC-0.69□□□□□ -2.52
CCDC18Q5T9S5 AC013244.3-201ENST00000605614 388 ntBASIC-0.69□□□□□ -2.52
CCDC18Q5T9S5 RNU4-27P-201ENST00000410889 139 ntBASIC-0.7□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms