Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
LRIF1Q5T3J3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
LRIF1Q5T3J3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.33□□□□□ -2.04
LRIF1Q5T3J3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LRIF1Q5T3J3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.32□□□□□ -2.04
LRIF1Q5T3J3 MIR21-201ENST00000362134 72 ntBASIC2.32□□□□□ -2.04
LRIF1Q5T3J3 RNU6-944P-201ENST00000364023 107 ntBASIC2.32□□□□□ -2.04
LRIF1Q5T3J3 RNU6-546P-201ENST00000383991 107 ntBASIC2.32□□□□□ -2.04
LRIF1Q5T3J3 MIR27B-201ENST00000385129 97 ntBASIC2.32□□□□□ -2.04
LRIF1Q5T3J3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.32□□□□□ -2.04
LRIF1Q5T3J3 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.32□□□□□ -2.04
LRIF1Q5T3J3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.32□□□□□ -2.04
LRIF1Q5T3J3 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.32□□□□□ -2.04
LRIF1Q5T3J3 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.32□□□□□ -2.04
LRIF1Q5T3J3 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.32□□□□□ -2.04
LRIF1Q5T3J3 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.32□□□□□ -2.04
LRIF1Q5T3J3 RN7SKP132-201ENST00000516001 208 ntBASIC2.32□□□□□ -2.04
LRIF1Q5T3J3 RNU1-104P-201ENST00000517280 175 ntBASIC2.32□□□□□ -2.04
LRIF1Q5T3J3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.32□□□□□ -2.04
LRIF1Q5T3J3 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.32□□□□□ -2.04
LRIF1Q5T3J3 MIR4658-201ENST00000584344 65 ntBASIC2.32□□□□□ -2.04
LRIF1Q5T3J3 ELOCP29-201ENST00000588193 334 ntBASIC2.32□□□□□ -2.04
LRIF1Q5T3J3 7SK.7-201ENST00000603504 247 ntBASIC2.32□□□□□ -2.04
LRIF1Q5T3J3 RPL17P51-201ENST00000605218 238 ntBASIC2.32□□□□□ -2.04
LRIF1Q5T3J3 AC016727.1-205ENST00000605437 569 ntBASIC2.32□□□□□ -2.04
LRIF1Q5T3J3 LARP7P1-201ENST00000605576 316 ntBASIC2.32□□□□□ -2.04
LRIF1Q5T3J3 AP000654.2-201ENST00000605633 586 ntBASIC2.32□□□□□ -2.04
LRIF1Q5T3J3 AL132765.2-201ENST00000610812 351 ntBASIC2.32□□□□□ -2.04
LRIF1Q5T3J3 AC063943.3-201ENST00000615562 356 ntBASIC2.32□□□□□ -2.04
LRIF1Q5T3J3 PISRT1.1-201ENST00000616930 107 ntBASIC2.32□□□□□ -2.04
LRIF1Q5T3J3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LRIF1Q5T3J3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.32□□□□□ -2.04
LRIF1Q5T3J3 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
LRIF1Q5T3J3 ZNF299P-201ENST00000406845 1804 ntBASIC2.31□□□□□ -2.04
LRIF1Q5T3J3 Y_RNA.70-201ENST00000362886 110 ntBASIC2.31□□□□□ -2.04
LRIF1Q5T3J3 RNU1-23P-201ENST00000363361 144 ntBASIC2.31□□□□□ -2.04
LRIF1Q5T3J3 RNU6-1059P-201ENST00000363752 98 ntBASIC2.31□□□□□ -2.04
LRIF1Q5T3J3 SNORD115-32-201ENST00000364079 82 ntBASIC2.31□□□□□ -2.04
LRIF1Q5T3J3 SNORA67.1-201ENST00000364749 141 ntBASIC2.31□□□□□ -2.04
LRIF1Q5T3J3 MIR1294-201ENST00000408503 142 ntBASIC2.31□□□□□ -2.04
LRIF1Q5T3J3 RNU2-32P-201ENST00000411193 191 ntBASIC2.31□□□□□ -2.04
LRIF1Q5T3J3 AC243428.1-201ENST00000421099 264 ntBASIC2.31□□□□□ -2.04
LRIF1Q5T3J3 AL358453.1-201ENST00000422522 250 ntBASIC2.31□□□□□ -2.04
LRIF1Q5T3J3 ARL5AP4-201ENST00000430731 512 ntBASIC2.31□□□□□ -2.04
LRIF1Q5T3J3 AC107083.1-201ENST00000439643 279 ntBASIC2.31□□□□□ -2.04
LRIF1Q5T3J3 OR2AQ1P-201ENST00000451972 200 ntBASIC2.31□□□□□ -2.04
LRIF1Q5T3J3 AF186996.7-201ENST00000492781 209 ntBASIC2.31□□□□□ -2.04
LRIF1Q5T3J3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.31□□□□□ -2.04
LRIF1Q5T3J3 Y_RNA.670-201ENST00000516255 105 ntBASIC2.31□□□□□ -2.04
LRIF1Q5T3J3 RNU6-307P-201ENST00000516743 106 ntBASIC2.31□□□□□ -2.04
LRIF1Q5T3J3 AC005899.2-201ENST00000584353 90 ntBASIC2.31□□□□□ -2.04
LRIF1Q5T3J3 AC009994.1-201ENST00000606889 253 ntBASIC2.31□□□□□ -2.04
LRIF1Q5T3J3 AC067747.1-201ENST00000608026 250 ntBASIC2.31□□□□□ -2.04
LRIF1Q5T3J3 U4.3-201ENST00000621047 82 ntBASIC2.31□□□□□ -2.04
LRIF1Q5T3J3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.31□□□□□ -2.04
LRIF1Q5T3J3 AC016717.2-201ENST00000609089 5141 ntBASIC2.31□□□□□ -2.04
LRIF1Q5T3J3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.31□□□□□ -2.04
LRIF1Q5T3J3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LRIF1Q5T3J3 RNU6-595P-201ENST00000363944 107 ntBASIC2.3□□□□□ -2.04
LRIF1Q5T3J3 SNORA25B-201ENST00000365507 128 ntBASIC2.3□□□□□ -2.04
LRIF1Q5T3J3 Y_RNA.384-201ENST00000383909 102 ntBASIC2.3□□□□□ -2.04
LRIF1Q5T3J3 Y_RNA.387-201ENST00000383918 102 ntBASIC2.3□□□□□ -2.04
LRIF1Q5T3J3 RNU6-378P-201ENST00000384324 107 ntBASIC2.3□□□□□ -2.04
LRIF1Q5T3J3 MT-TD-201ENST00000387419 68 ntBASIC2.3□□□□□ -2.04
LRIF1Q5T3J3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
LRIF1Q5T3J3 MIR208B-201ENST00000401172 77 ntBASIC2.3□□□□□ -2.04
LRIF1Q5T3J3 SNORD109B-201ENST00000458961 67 ntBASIC2.3□□□□□ -2.04
LRIF1Q5T3J3 SNORD109A-201ENST00000459128 67 ntBASIC2.3□□□□□ -2.04
LRIF1Q5T3J3 RN7SKP210-201ENST00000459176 261 ntBASIC2.3□□□□□ -2.04
LRIF1Q5T3J3 AC087477.1-201ENST00000465747 340 ntBASIC2.3□□□□□ -2.04
LRIF1Q5T3J3 MTND4P17-201ENST00000470444 350 ntBASIC2.3□□□□□ -2.04
LRIF1Q5T3J3 FO393415.2-201ENST00000480085 343 ntBASIC2.3□□□□□ -2.04
LRIF1Q5T3J3 AC018868.1-201ENST00000491307 315 ntBASIC2.3□□□□□ -2.04
LRIF1Q5T3J3 RNU6-507P-201ENST00000516045 100 ntBASIC2.3□□□□□ -2.04
LRIF1Q5T3J3 RNU6-277P-201ENST00000516272 106 ntBASIC2.3□□□□□ -2.04
LRIF1Q5T3J3 CYCSP26-201ENST00000534107 320 ntBASIC2.3□□□□□ -2.04
LRIF1Q5T3J3 MYL12BP1-201ENST00000569826 507 ntBASIC2.3□□□□□ -2.04
LRIF1Q5T3J3 MIR5690-201ENST00000583739 73 ntBASIC2.3□□□□□ -2.04
LRIF1Q5T3J3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.3□□□□□ -2.04
LRIF1Q5T3J3 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.3□□□□□ -2.04
LRIF1Q5T3J3 AC009229.3-201ENST00000608056 282 ntBASIC2.3□□□□□ -2.04
LRIF1Q5T3J3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.3□□□□□ -2.04
LRIF1Q5T3J3 KPNA2P1-201ENST00000458289 1591 ntBASIC2.3□□□□□ -2.04
LRIF1Q5T3J3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
LRIF1Q5T3J3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
LRIF1Q5T3J3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LRIF1Q5T3J3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
LRIF1Q5T3J3 Y_RNA.2-201ENST00000362330 96 ntBASIC2.29□□□□□ -2.04
LRIF1Q5T3J3 RNU6-611P-201ENST00000384276 104 ntBASIC2.29□□□□□ -2.04
LRIF1Q5T3J3 SNORA75.4-201ENST00000391278 119 ntBASIC2.29□□□□□ -2.04
LRIF1Q5T3J3 RNU4-14P-201ENST00000410858 122 ntBASIC2.29□□□□□ -2.04
LRIF1Q5T3J3 USMG5P1-201ENST00000425964 177 ntBASIC2.29□□□□□ -2.04
LRIF1Q5T3J3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.29□□□□□ -2.04
LRIF1Q5T3J3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.29□□□□□ -2.04
LRIF1Q5T3J3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.29□□□□□ -2.04
LRIF1Q5T3J3 RNA5SP320-201ENST00000516263 124 ntBASIC2.29□□□□□ -2.04
LRIF1Q5T3J3 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.29□□□□□ -2.04
LRIF1Q5T3J3 NDUFA5P6-201ENST00000542110 379 ntBASIC2.29□□□□□ -2.04
LRIF1Q5T3J3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.29□□□□□ -2.04
LRIF1Q5T3J3 RPS3AP23-202ENST00000574601 686 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 163.6 ms