| CRY2 | Q49AN0 | FSIP2-202 | ENST00000424728 | 20788 nt | APPRIS P2 TSL 5 BASIC | 2.29 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | KPNA5-202 | ENST00000368564 | 11311 nt | APPRIS P1 TSL 1 (best) BASIC | 2.29 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | RGS18-201 | ENST00000367460 | 2150 nt | APPRIS P1 TSL 1 (best) BASIC | 2.29 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | RGPD1-204 | ENST00000559485 | 5247 nt | APPRIS P2 TSL 1 (best) BASIC | 2.28 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC092268.1-201 | ENST00000342691 | 405 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | RNY3P3-201 | ENST00000363816 | 102 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | SNORD32A-201 | ENST00000364805 | 84 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | RNU4-12P-201 | ENST00000365233 | 139 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | RNU6-1329P-201 | ENST00000365664 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | RNU6-142P-201 | ENST00000384019 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | RN7SKP61-201 | ENST00000410642 | 295 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | RNU6-321P-201 | ENST00000410912 | 106 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AL669831.2-201 | ENST00000422528 | 456 nt | TSL 5 BASIC | 2.28 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | CBX3P6-201 | ENST00000430257 | 527 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | LINC01203-202 | ENST00000456091 | 476 nt | TSL 3 BASIC | 2.28 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | U8.21-201 | ENST00000459536 | 136 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | RPL9P9-202 | ENST00000466501 | 579 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | RNU6-1332P-201 | ENST00000516666 | 104 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | NDUFA5P6-201 | ENST00000542110 | 379 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | TRAV32-201 | ENST00000553993 | 340 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC009269.4-201 | ENST00000557828 | 440 nt | TSL 3 BASIC | 2.28 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | ZNF788-206 | ENST00000596883 | 692 nt | TSL 3 BASIC | 2.28 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC020910.1-201 | ENST00000599404 | 413 nt | TSL 5 BASIC | 2.28 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | SNRPGP17-201 | ENST00000603780 | 214 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC064836.2-201 | ENST00000609491 | 462 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC022202.1-201 | ENST00000613515 | 211 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC012640.5-201 | ENST00000623897 | 319 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC121333.1-201 | ENST00000567488 | 2709 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | CCDC148-202 | ENST00000409187 | 2523 nt | APPRIS P1 TSL 5 BASIC | 2.28 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | OR5M1-202 | ENST00000641076 | 4302 nt | APPRIS P1 BASIC | 2.28 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | RNU6-743P-201 | ENST00000364151 | 106 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | Y_RNA.516-201 | ENST00000384541 | 124 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | Y_RNA.554-201 | ENST00000384672 | 102 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | Y_RNA.573-201 | ENST00000384763 | 105 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | SNORD23.1-201 | ENST00000408212 | 104 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | RNU4-62P-201 | ENST00000410125 | 130 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AP000275.1-201 | ENST00000411943 | 390 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AL133396.1-201 | ENST00000432048 | 687 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | GPM6BP3-201 | ENST00000442797 | 145 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | LINC01691-201 | ENST00000450546 | 426 nt | TSL 5 BASIC | 2.27 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AL021397.1-201 | ENST00000451806 | 248 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AL137159.1-201 | ENST00000452808 | 512 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AC145146.1-201 | ENST00000496370 | 254 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | RPL39P5-202 | ENST00000512505 | 151 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | RNU6-612P-201 | ENST00000516909 | 102 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AC107953.1-201 | ENST00000522216 | 297 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AP002884.4-201 | ENST00000527589 | 594 nt | TSL 3 BASIC | 2.27 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AC007347.1-201 | ENST00000563879 | 281 nt | TSL 3 BASIC | 2.27 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | MIR3923-201 | ENST00000579521 | 83 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | U4.5-201 | ENST00000617137 | 123 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AC010722.1-201 | ENST00000622595 | 582 nt | TSL 5 BASIC | 2.27 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | MIR203B-201 | ENST00000636080 | 86 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | TBC1D31-206 | ENST00000518805 | 2201 nt | TSL 2 BASIC | 2.27 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AC009541.1-201 | ENST00000438279 | 2662 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | MTND4P23-201 | ENST00000447723 | 1363 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | RNY4P14-201 | ENST00000363656 | 96 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | RNU6-611P-201 | ENST00000384276 | 104 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | Y_RNA.615-201 | ENST00000410769 | 117 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AC007314.1-201 | ENST00000414538 | 565 nt | TSL 4 BASIC | 2.26 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AP1B1P2-201 | ENST00000416196 | 106 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | EIF1AXP1-201 | ENST00000419267 | 435 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AC114801.2-201 | ENST00000503825 | 781 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | SNORA31.16-201 | ENST00000516773 | 139 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | RNA5SP137-201 | ENST00000516833 | 135 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AC087664.2-201 | ENST00000522898 | 551 nt | TSL 4 BASIC | 2.26 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | TPRKBP2-201 | ENST00000565969 | 475 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AC090371.2-202 | ENST00000582239 | 644 nt | TSL 5 BASIC | 2.26 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | KPNA2P1-201 | ENST00000458289 | 1591 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | ZNF260-203 | ENST00000588993 | 4174 nt | APPRIS P1 TSL 1 (best) BASIC | 2.26 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | SENP7-206 | ENST00000394094 | 4703 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.25 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | RNU4-15P-201 | ENST00000362613 | 141 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | RNU6-227P-201 | ENST00000362865 | 103 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | RNU6-451P-201 | ENST00000362921 | 107 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | RNU6-522P-201 | ENST00000364497 | 107 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | RNU6-877P-201 | ENST00000383868 | 107 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | Y_RNA.450-201 | ENST00000384198 | 113 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | SNORA67.5-201 | ENST00000391036 | 107 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | RNU6-332P-201 | ENST00000391193 | 108 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | MTCO1P21-201 | ENST00000416634 | 589 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AL137856.1-202 | ENST00000418238 | 422 nt | TSL 3 BASIC | 2.25 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AL445989.1-202 | ENST00000418943 | 776 nt | TSL 2 BASIC | 2.25 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | UBE2V1P4-201 | ENST00000425374 | 344 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | RPL23AP95-201 | ENST00000426806 | 265 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | NDUFA5P4-201 | ENST00000436704 | 385 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | IFNA20P-201 | ENST00000436840 | 528 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AL591501.1-201 | ENST00000439992 | 495 nt | TSL 5 BASIC | 2.25 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AL354949.1-201 | ENST00000446438 | 170 nt | TSL 2 BASIC | 2.25 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | RPL23AP7-203 | ENST00000449021 | 469 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AC107032.1-201 | ENST00000485945 | 480 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | CFAP100-207 | ENST00000510833 | 481 nt | APPRIS ALT2 TSL 3 BASIC | 2.25 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AC025465.4-201 | ENST00000513422 | 638 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AC018630.3-201 | ENST00000542637 | 96 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AC026371.1-201 | ENST00000551867 | 419 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AC021231.3-201 | ENST00000558497 | 370 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | BNIP3P25-201 | ENST00000596023 | 559 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | MIR8081-201 | ENST00000611533 | 95 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | DDIAS-201 | ENST00000329143 | 3367 nt | APPRIS P2 TSL 1 (best) BASIC | 2.25 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | ATF1-201 | ENST00000262053 | 2181 nt | APPRIS P1 TSL 1 (best) BASIC | 2.25 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | MUC15-202 | ENST00000436318 | 3118 nt | TSL 5 BASIC | 2.24 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | SNORD115-3-201 | ENST00000363100 | 82 nt | BASIC | 2.24 | □□□□□ -2.05 | | |