Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 SNORA26.3-201ENST00000391119 136 ntBASIC1.05□□□□□ -2.24
ZNF404Q494X3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
ZNF404Q494X3 RPS29P13-201ENST00000402041 169 ntBASIC1.05□□□□□ -2.24
ZNF404Q494X3 RNU6-321P-201ENST00000410912 106 ntBASIC1.05□□□□□ -2.24
ZNF404Q494X3 MTND3P17-201ENST00000416968 344 ntBASIC1.05□□□□□ -2.24
ZNF404Q494X3 AL117339.3-201ENST00000418733 162 ntBASIC1.05□□□□□ -2.24
ZNF404Q494X3 EBAG9P1-201ENST00000418955 543 ntBASIC1.05□□□□□ -2.24
ZNF404Q494X3 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.05□□□□□ -2.24
ZNF404Q494X3 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.05□□□□□ -2.24
ZNF404Q494X3 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.05□□□□□ -2.24
ZNF404Q494X3 PRPS1P1-201ENST00000445305 876 ntBASIC1.05□□□□□ -2.24
ZNF404Q494X3 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
ZNF404Q494X3 RNU7-14P-201ENST00000459331 62 ntBASIC1.05□□□□□ -2.24
ZNF404Q494X3 TOMM22P6-201ENST00000465035 409 ntBASIC1.05□□□□□ -2.24
ZNF404Q494X3 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.05□□□□□ -2.24
ZNF404Q494X3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.05□□□□□ -2.24
ZNF404Q494X3 AC099513.1-201ENST00000490423 301 ntBASIC1.05□□□□□ -2.24
ZNF404Q494X3 AC016632.1-201ENST00000503994 196 ntBASIC1.05□□□□□ -2.24
ZNF404Q494X3 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.05□□□□□ -2.24
ZNF404Q494X3 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.05□□□□□ -2.24
ZNF404Q494X3 RNU5F-4P-201ENST00000516581 114 ntBASIC1.05□□□□□ -2.24
ZNF404Q494X3 AC084364.2-201ENST00000546924 395 ntBASIC1.05□□□□□ -2.24
ZNF404Q494X3 AC078795.3-201ENST00000602913 472 ntBASIC1.05□□□□□ -2.24
ZNF404Q494X3 AC011458.1-201ENST00000604034 617 ntBASIC1.05□□□□□ -2.24
ZNF404Q494X3 PCGEM1.1-201ENST00000613431 131 ntBASIC1.05□□□□□ -2.24
ZNF404Q494X3 AC083806.3-201ENST00000614016 455 ntBASIC1.05□□□□□ -2.24
ZNF404Q494X3 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.05□□□□□ -2.24
ZNF404Q494X3 AL603839.4-201ENST00000624658 1005 ntBASIC1.05□□□□□ -2.24
ZNF404Q494X3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
ZNF404Q494X3 MIR26B-201ENST00000362251 77 ntBASIC1.04□□□□□ -2.24
ZNF404Q494X3 MIR302D-201ENST00000362275 68 ntBASIC1.04□□□□□ -2.24
ZNF404Q494X3 SNORD31B-201ENST00000364977 69 ntBASIC1.04□□□□□ -2.24
ZNF404Q494X3 RNU6-434P-201ENST00000384376 107 ntBASIC1.04□□□□□ -2.24
ZNF404Q494X3 RNU6-1026P-201ENST00000384465 108 ntBASIC1.04□□□□□ -2.24
ZNF404Q494X3 RNU6-393P-201ENST00000384475 107 ntBASIC1.04□□□□□ -2.24
ZNF404Q494X3 RNU6-360P-201ENST00000390944 104 ntBASIC1.04□□□□□ -2.24
ZNF404Q494X3 RNU2-7P-201ENST00000410794 178 ntBASIC1.04□□□□□ -2.24
ZNF404Q494X3 HMGN1P14-201ENST00000412459 517 ntBASIC1.04□□□□□ -2.24
ZNF404Q494X3 HIGD1AP15-201ENST00000416198 280 ntBASIC1.04□□□□□ -2.24
ZNF404Q494X3 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.04□□□□□ -2.24
ZNF404Q494X3 C8orf59P1-201ENST00000429930 303 ntBASIC1.04□□□□□ -2.24
ZNF404Q494X3 RPL31P35-201ENST00000431058 377 ntBASIC1.04□□□□□ -2.24
ZNF404Q494X3 RPS6P15-201ENST00000431996 751 ntBASIC1.04□□□□□ -2.24
ZNF404Q494X3 AL133396.1-201ENST00000432048 687 ntBASIC1.04□□□□□ -2.24
ZNF404Q494X3 FTH1P12-201ENST00000432137 551 ntBASIC1.04□□□□□ -2.24
ZNF404Q494X3 AC009961.2-201ENST00000435771 251 ntBASIC1.04□□□□□ -2.24
ZNF404Q494X3 MTND1P18-201ENST00000448191 573 ntBASIC1.04□□□□□ -2.24
ZNF404Q494X3 ATP5J2P3-201ENST00000451550 258 ntBASIC1.04□□□□□ -2.24
ZNF404Q494X3 AC079382.1-201ENST00000493346 557 ntBASIC1.04□□□□□ -2.24
ZNF404Q494X3 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.04□□□□□ -2.24
ZNF404Q494X3 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.04□□□□□ -2.24
ZNF404Q494X3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.04□□□□□ -2.24
ZNF404Q494X3 AK3P2-201ENST00000507976 429 ntBASIC1.04□□□□□ -2.24
ZNF404Q494X3 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.04□□□□□ -2.24
ZNF404Q494X3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.04□□□□□ -2.24
ZNF404Q494X3 LRRC34P2-201ENST00000514850 553 ntBASIC1.04□□□□□ -2.24
ZNF404Q494X3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.04□□□□□ -2.24
ZNF404Q494X3 RNU6-1098P-201ENST00000516772 96 ntBASIC1.04□□□□□ -2.24
ZNF404Q494X3 RNA5SP437-201ENST00000517249 129 ntBASIC1.04□□□□□ -2.24
ZNF404Q494X3 MIR4703-201ENST00000577728 79 ntBASIC1.04□□□□□ -2.24
ZNF404Q494X3 AC073413.2-201ENST00000604332 360 ntBASIC1.04□□□□□ -2.24
ZNF404Q494X3 MIR6078-201ENST00000611069 100 ntBASIC1.04□□□□□ -2.24
ZNF404Q494X3 AL121890.5-201ENST00000620848 304 ntBASIC1.04□□□□□ -2.24
ZNF404Q494X3 AL159152.1-201ENST00000635019 2587 ntBASIC1.04□□□□□ -2.24
ZNF404Q494X3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
ZNF404Q494X3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
ZNF404Q494X3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
ZNF404Q494X3 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
ZNF404Q494X3 RNU6-552P-201ENST00000362869 119 ntBASIC1.03□□□□□ -2.24
ZNF404Q494X3 SNORD1A-201ENST00000364968 72 ntBASIC1.03□□□□□ -2.24
ZNF404Q494X3 RNU6-939P-201ENST00000384634 107 ntBASIC1.03□□□□□ -2.24
ZNF404Q494X3 SNORA40.3-201ENST00000390964 122 ntBASIC1.03□□□□□ -2.24
ZNF404Q494X3 SNORD70.1-201ENST00000391007 85 ntBASIC1.03□□□□□ -2.24
ZNF404Q494X3 AL031577.2-201ENST00000404133 280 ntBASIC1.03□□□□□ -2.24
ZNF404Q494X3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.03□□□□□ -2.24
ZNF404Q494X3 MRPL35P3-201ENST00000421557 364 ntBASIC1.03□□□□□ -2.24
ZNF404Q494X3 AC010099.3-201ENST00000423896 409 ntBASIC1.03□□□□□ -2.24
ZNF404Q494X3 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.03□□□□□ -2.24
ZNF404Q494X3 RPL23AP95-201ENST00000426806 265 ntBASIC1.03□□□□□ -2.24
ZNF404Q494X3 AC002486.1-201ENST00000435098 391 ntBASIC1.03□□□□□ -2.24
ZNF404Q494X3 AC099677.2-201ENST00000436385 175 ntBASIC1.03□□□□□ -2.24
ZNF404Q494X3 AL135790.2-201ENST00000437701 267 ntBASIC1.03□□□□□ -2.24
ZNF404Q494X3 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.03□□□□□ -2.24
ZNF404Q494X3 AC016925.1-201ENST00000458303 298 ntBASIC1.03□□□□□ -2.24
ZNF404Q494X3 snoU13.30-201ENST00000458951 104 ntBASIC1.03□□□□□ -2.24
ZNF404Q494X3 AC005840.1-201ENST00000498412 377 ntBASIC1.03□□□□□ -2.24
ZNF404Q494X3 TRMT112P2-201ENST00000512910 132 ntBASIC1.03□□□□□ -2.24
ZNF404Q494X3 RNU2-69P-201ENST00000516061 100 ntBASIC1.03□□□□□ -2.24
ZNF404Q494X3 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.03□□□□□ -2.24
ZNF404Q494X3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.03□□□□□ -2.24
ZNF404Q494X3 EIF4A1P12-201ENST00000551910 141 ntBASIC1.03□□□□□ -2.24
ZNF404Q494X3 AC103996.1-201ENST00000555468 102 ntBASIC1.03□□□□□ -2.24
ZNF404Q494X3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.03□□□□□ -2.24
ZNF404Q494X3 AC009094.1-201ENST00000564443 426 ntBASIC1.03□□□□□ -2.24
ZNF404Q494X3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.03□□□□□ -2.24
ZNF404Q494X3 Z98751.3-201ENST00000604447 521 ntBASIC1.03□□□□□ -2.24
ZNF404Q494X3 Z84480.1-201ENST00000605131 311 ntBASIC1.03□□□□□ -2.24
ZNF404Q494X3 AC006566.1-201ENST00000608943 513 ntBASIC1.03□□□□□ -2.24
ZNF404Q494X3 AP001506.1-201ENST00000615444 211 ntBASIC1.03□□□□□ -2.24
ZNF404Q494X3 uc_338.11-201ENST00000619132 160 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms